Tools for model building in structural biology – Bernhard Lohkamp's group

Publications

Selected publications

• Article: ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY. 2023;79(Pt 6):449-461

  The CCP4 suite: integrative software for macromolecular crystallography

  Agirre J; Atanasova M; Bagdonas H; Ballard CB; Basle A; Beilsten-Edmands J; Borges RJ; Brown DG; Burgos-Marmol JJ; Berrisford JM; Bond PS; Caballero I; Catapano L; Chojnowski G; Cook AG; Cowtan KD; Croll TI; Debreczeni JE; Devenish NE; Dodson EJ; Drevon TR; Emsley P; Evans G; Evans PR; Fando M; Foadi J; Fuentes-Montero L; Garman EF; Gerstel M; Gildea RJ; Hatti K; Hekkelman ML; Heuser P; Hoh SW; Hough MA; Jenkins HT; Jimenez E; Joosten RP; Keegan RM; Keep N; Krissinel EB; Kolenko P; Kovalevskiy O; Lamzin VS; Lawson DM; Lebedev AA; Leslie AGW; Lohkamp B; Long F; Maly M; McCoy AJ; McNicholas SJ; Medina A; Millan C; Murray JW; Murshudov GN; Nicholls RA; Noble MEM; Oeffner R; Pannu NS; Parkhurst JM; Pearce N; Pereira J; Perrakis A; Powell HR; Read RJ; Rigden DJ; Rochira W; Sammito M; Rodriguez FS; Sheldrick GM; Shelley KL; Simkovic F; Simpkin AJ; Skubak P; Sobolev E; Steiner RA; Stevenson K; Tews I; Thomas JMH; Thorn A; Trivino Valls J; Uski V; Uson I; Vagin A; Velankar S; Vollmar M; Walden H; Waterman D; Wilson KS; Winn MD; Winter G; Wojdyr M; Yamashita K
• Article: ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY. 2022;78(Pt 9):1079-1089

  CCP4 Cloud for structure determination and project management in macromolecular crystallograpny

  Krissinel E; Lebedev AA; Uski V; Ballard CB; Keegan RM; Kovalevskiy O; Nicholls RA; Pannu NS; Skubak P; Berrisford J; Fando M; Lohkamp B; Wojdyr M; Simpkin AJ; Thomas JMH; Oliver C; Vonrhein C; Chojnowski G; Basle A; Purkiss A; Isupov MN; McNicholas S; Lowe E; Trivino J; Cowtan K; Agirre J; Rigden DJ; Uson I; Lamzin V; Tews I; Bricogne G; Leslie AGW; Brown DG
• Article: PROTEIN SCIENCE. 2020;29(4):1069-1078

  Current developments in Coot for macromolecular model building of Electron Cryo-microscopy and Crystallographic Data

  Casanal A; Lohkamp B; Emsley P
• Article: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2017;114(14):3637-3641

  Ab initio solution of macromolecular crystal structures without direct methods

  McCoy AJ; Oeffner RD; Wrobel AG; Ojala JRM; Tryggvason K; Lohkamp B; Read RJ
• Article: ACTA CRYSTALLOGRAPHICA SECTION D: BIOLOGICAL CRYSTALLOGRAPHY. 2014;70(Pt 6):1680-1694

  Crystal structure of human CRMP-4: correction of intensities for lattice-translocation disorder

  Ponnusamy R; Lebedev AA; Pahlow S; Lohkamp B
• Article: JOURNAL OF NEUROCHEMISTRY. 2013;125(6):855-868

  Insights into the oligomerization of CRMPs: crystal structure of human collapsin response mediator protein 5

  Ponnusamy R; Lohkamp B
• Book chapter: 2012;p. 443-447

  Macromolecular model building and validation using Coot

  Emsley P; Lohkamp B; Cowtan K
• Article: ACTA CRYSTALLOGRAPHICA SECTION D: BIOLOGICAL CRYSTALLOGRAPHY. 2010;66(Pt 4):486-501

  Features and development of Coot

  Emsley P; Lohkamp B; Scott WG; Cowtan K

Staff and contact

Group leader

• 

  Bernhard Lohkamp

  Senior Lecturer | Docent

  Telephone +46852487055

  E-mail bernhard.lohkamp@ki.se

All members of the group

• 

  Bernhard Lohkamp

  Senior Lecturer | Docent

  Telephone +46852487055

  E-mail bernhard.lohkamp@ki.se