BEA - reference list

Below is a collection of references that could be useful to our customers.

2024

Multi-omics analysis reveals the attenuation of the interferon pathway as a driver of chemo-refractory ovarian cancer.
Afenteva D, Yu R, Rajavuori A, Salvadores M, Launonen IM, Lavikka K, Zhang K, Pirttikoski A, Marchi G, Jamalzadeh S, Isoviita VM, Li Y, Micoli G, Erkan EP, Falco MM, Ungureanu D, Lahtinen A, Oikkonen J, Hietanen S, Vähärautio A, Sur I, Virtanen A, Färkkilä A, Hynninen J, Muranen TA, Taipale J, Hautaniemi S
Cell Rep Med 2025 Sep;6(9):102316

Silk-Ovarioids: establishment and characterization of a human ovarian primary cell 3D-model system.
Di Nisio V, Li T, Xiao Z, Papaikonomou K, Damdimopoulos A, Végvári Á, Lebre F, Alfaro-Moreno E, Pedersen M, Svingen T, Zubarev R, Acharya G, Damdimopoulou P, Salumets A
Hum Reprod Open 2025 ;2025(3):hoaf042

Immunogenicity and innate immunity to high-dose and repeated vaccination of modified mRNA versus unmodified mRNA.
Engstrand O, Joas G, Miranda MC, Yan X, Lenart K, Cerveira RA, Reinhardt A, Loré K
Mol Ther Nucleic Acids 2025 Sep;36(3):102588

The balance between conventional and unconventional T follicular helper cells influences autoreactive B cell responses.
He C, Wang S, Moreews M, Pei S, Chen G, Li QZ, Del Monte Monge A, Ramiro AR, Cai C, Gaya M, Barral P, Buggert M, Batista FD, Karlsson MCI
Cell Rep 2025 May;44(5):115602

Effects of Stress Coping Styles and Social Defeat on Zebrafish Behaviour and Brain Transcriptomics.
Hubená P, Benrejdal L, Brodin D, Axling J, Sarma OS, Bergman P, Winberg S
Neurosci Bull 2025 Sep;():

Molecular interactome of HNRNPU reveals regulatory networks in neuronal differentiation and DNA methylation
Oksanen M, Mastropasqua F, Mazan-Mamczarz K, Martindale JL, Xuan Ye1,2, Arora A, Banskota N, Gorospe M, Tammimies K. (Preprint). https://doi.org/10.1101/2025.02.19.638869.

Transcriptomic profiles of endocrine-resistant breast cancer.
Schagerholm Stanev C, Sifakis EG, Hases L, Chen X, Williams C, Robertson S, Hartman J
BMC Cancer 2025 Oct;25(1):1556

Expression and Clinical Significance of Sideroflexin 4 (SFXN4) in Colorectal Cancer.
Shamoun L, Dimberg J, Geijerstam KAF, Moltubak E, Landerholm K, Wågsäter D
In Vivo 2025 ;39(6):3367-3380

Targeted inhibition of WIP1 and histone H3K27 demethylase activity synergistically suppresses neuroblastoma growth.
Treis D, Lundberg KI, Bell N, Polychronopoulos PA, Tümmler C, Åkerlund E, Aliverti S, Lilienthal I, Pepich A, Seashore-Ludlow B, Sakaguchi K, Kogner P, Johnsen JI, Wickström M
Cell Death Dis 2025 Apr;16(1):318

Disease-specific epigenetic deregulation of enhancers, transposons, and polycomb targets in acute promyelocytic leukemia.
Zhong X, Cordeddu L, Gamboa-Cedeno A, Bengtzén S, Ekwall K, Lennartsson A, Lehmann S
Genome Med 2025 Oct;17(1):135

2024

Mechanical loading intensities affect the release of extracellular vesicles from mouse bone marrow-derived hematopoietic progenitor cells and change their osteoclast-modulating effect.
Bratengeier C, Johansson L, Liszka A, Bakker AD, Hallbeck M, Fahlgren A
FASEB J 2024 Jan;38(1):e23323

Decreased mitochondrial-related gene expression in adipose tissue after acute sprint exercise in humans: A pilot study.
Esbjörnsson M, Rundqvist HC, Norman B, Österlund T, Rullman E, Bülow J, Jansson E
Physiol Rep 2024 Oct;12(20):e70088

Sustained immune activation and impaired epithelial barrier integrity in the ectocervix of women with chronic HIV infection.
Franzén Boger M, Hasselrot T, Kaldhusdal V, Miranda GHB, Czarnewski P, Edfeldt G, Bradley F, Rexaj G, Lajoie J, Omollo K, Kimani J, Fowke KR, Broliden K, Tjernlund A
PLoS Pathog 2024 Nov;20(11):e1012709

Estradiol-mediated enhancement of the human ectocervical epithelial barrier correlates with desmoglein-1 expression in the follicular menstrual phase.
Bradley F, Stern A, Franzén Boger M, Mousavian Z, Dethlefsen O, Kaldhusdal V, Lajoie J, Omollo K, Bergström S, Månberg A, Nilsson P, Kimani J, Burgener AD, Tjernlund A, Sundling C, Fowke KR, Broliden K
Front Endocrinol (Lausanne) 2024 ;15():1454006

Effects of chemical in vitro activation versus fragmentation on human ovarian tissue and follicle growth in culture.
Hao J, Li T, Heinzelmann M, Moussaud-Lamodière E, Lebre F, Krjutškov K, Damdimopoulos A, Arnelo C, Pettersson K, Alfaro-Moreno E, Lindskog C, van Duursen M, Damdimopoulou P
Hum Reprod Open 2024 ;2024(3):hoae028

Jag1 insufficiency alters liver fibrosis via T cell and hepatocyte differentiation defects.
Mašek J, Filipovic I, Van Hul N, Belicová L, Jiroušková M, Oliveira DV, Frontino AM, Hankeova S, He J, Turetti F, Iqbal A, Červenka I, Sarnová L, Verboven E, Brabec T, Björkström NK, Gregor M, Dobeš J, Andersson ER
EMBO Mol Med 2024 Nov;16(11):2946-2975

Intravenous chaperone treatment of late-stage Alzheimer´s disease (AD) mouse model affects amyloid plaque load, reactive gliosis and AD-related genes.
Zhang R, Ohshima M, Brodin D, Wang Y, Morancé A, Schultzberg M, Chen G, Johansson J
Transl Psychiatry 2024 Oct;14(1):453

2023

Emerging role and clinical implication of mRNA scavenger decapping enzyme in colorectal cancer.
Jan Dimberg , Shamoun L, Johansson G, Landerholm K, Wågsäter D
Pathol Res Pract 2024 Jan;253():155009

Characterization of the bone marrow niche in patients with chronic myeloid leukemia identifies CXCL14 as a new therapeutic option.
Dolinska M, Cai H, Månsson A, Shen J, Xiao P, Bouderlique T, Li X, Leonard E, Chang M, Gao Y, Medina JP, Kondo M, Sandhow L, Johansson AS, Deneberg S, Söderlund S, Jädersten M, Ungerstedt J, Tobiasson M, Östman A, Mustjoki S, Stenke L, Le Blanc K, Hellström-Lindberg E, Lehmann S, Ekblom M, Olsson-Strömberg U, Sigvardsson M, Qian H
Blood 2023 Jul;142(1):73-89

TGFß1 Stimulates Lymphatic Endothelial Cells to Produce IL7 and IL15, Which Act as Chemotactic Factors for Breast Cancer Cells with Mesenchymal Properties.
Giotopoulou N, Shi W, Parniewska MM, Sun W, Fuxe J
J Mammary Gland Biol Neoplasia 2023 Dec;28(1):25

The single-cell transcriptional landscape of innate and adaptive lymphocytes in pediatric-onset colitis.
Kokkinou E, Soini T, Pandey RV, van Acker A, Theorell J, Czarnewski P, Kvedaraite E, Vandamme N, Lourda M, Sorini C, Weigel W, Carrasco A, Tibbitt CA, Schlums H, Lindforss U, Nordenvall C, Ljunggren M, Ideström M, Svensson M, Henter JI, Villablanca EJ, Bryceson YT, Rolandsdotter H, Mjösberg J
Cell Rep Med 2023 May;4(5):101038

Stem cell-derived brainstem mouse astrocytes obtain a neurotoxic phenotype in vitro upon neuroinflammation.
Lindblad C, Neumann S, Kolbeinsdóttir S, Zachariadis V, Thelin EP, Enge M, Thams S, Brundin L, Svensson M
J Inflamm (Lond) 2023 Jun;20(1):22

Irradiation and lithium treatment alter the global DNA methylation pattern and gene expression underlying a shift from gliogenesis towards neurogenesis in human neural progenitors.
Neofytou C, Backlund A, Blomgren K, Hermanson O
Transl Psychiatry 2023 Jul;13(1):258

Control of protein synthesis through mRNA pseudouridylation by dyskerin.
Pederiva C, Trevisan DM, Peirasmaki D, Chen S, Savage SA, Larsson O, Ule J, Baranello L, Agostini F, Farnebo M
Sci Adv 2023 Jul;9(30):eadg1805

Chemical Modifications and Design Influence the Potency of Huntingtin Anti-Gene Oligonucleotides.
Saher O, Zaghloul EM, Umek T, Hagey DW, Mozafari N, Danielsen MB, Gouda AS, Lundin KE, Jørgensen PT, Wengel J, Smith CIE, Zain R
Nucleic Acid Ther 2023 Apr;33(2):117-131

Skin mesenchymal niches maintain and protect AML-initiating stem cells.
Sandhow L, Cai H, Leonard E, Xiao P, Tomaipitinca L, Månsson A, Kondo M, Sun X, Johansson AS, Tryggvason K, Kasper M, Järås M, Qian H
J Exp Med 2023 Oct;220(10):

Global loss of cellular m6A RNA methylation following infection with different SARS-CoV-2 variants.
Vaid R, Mendez A, Thombare K, Burgos-Panadero R, Robinot R, Fonseca BF, Gandasi NR, Ringlander J, Hassan Baig M, Dong JJ, Cho JY, Reinius B, Chakrabarti LA, Nystrom K, Mondal T
Genome Res 2023 Mar;33(3):299-313

An essential role for the Ino80 chromatin remodeling complex in regulation of gene expression during cellular quiescence.
Zahedi Y, Zeng S, Ekwall K
Chromosome Res 2023 Apr;31(2):14