Research at KaroKidney

KaroKidney is a collaboration between researchers from Karolinska Institutet and Karolinska University Hospital. Here you can read about our research projects.

Research Projects

Food as Medicine

What is good for the planet is also good for your health

Food as Medicine in chronic kidney disease

Food as Medicine - Research Group

Inflammatory Kidney Diseases/ Vasculitis

Pediatric Nephrology

The Pediatric Nephrology Research Group at Karolinska Institutet and Karolinska University Hospital is dedicated to improving the lives of children with kidney disease through clinical innovation, research, and global collaboration. We combine clinical expertise with advanced science to enhance understanding and treatment of pediatric kidney disorders—from molecular mechanisms to long-term outcomes.

Our research covers chronic kidney disease and dialysis, focusing on epidemiology, cardiovascular risk, and optimizing replacement therapies. Children undergoing kidney biopsy are included in the KaroKidney biopsy cohort since start of the network. We also work on congenital anomalies of the kidney and urinary tract, as well as on kidney transplantation to improve diagnostics and surgical results. Another important area of our research is infection and immunity, exploring defense mechanisms in urinary tract infections, hemolytic uremic syndrome and inflammation in CKD. Additionally, we develop strategies for fluid and electrolyte balance in critically ill children.

Our approach integrates clinical cohorts and international registries, translational research linking biology to practice, and strong multidisciplinary collaboration. The group has contributed to European guidelines, pioneered research on immune defense in urinary tract infections, and led long-term studies on CKD and transplantation.

Our vision is to deliver personalized, evidence-based care and turn scientific insights into global clinical improvements.

Group Members

Maria Herthelius 
Milan Chromek 
Peter Bárány 

Pediatric Nephrology - Research Group
Pediatric Nephrology - Research Group

Renal Biopsy Project

Background

Launched in 2010, this collaborative initiative unites clinicians and researchers from Karolinska University Hospital and Karolinska Institutet to advance chronic kidney disease (CKD) diagnostics and treatment.
We have established a unique biobank of kidney tissue, blood, and urine samples from CKD patients, linked to longitudinal outcome data.

Methods and Innovation

By integrating clinical variables with high-resolution biomolecular data and applying data-driven analytics, we uncover patterns beyond conventional biomarkers. This approach, combined with detailed histopathology, lays the foundation for next-generation diagnostic tools and individualized therapies.

Goals and Impact

Our research seeks to identify structural, genetic, and biological markers for CKD onset and progression, improving early diagnosis, tailoring treatments, and reducing the need for dialysis or transplantation.

Patient cohort

  • Adult and pediatric patients that undergo kidney biopsy at Karolinska University Hospital Huddinge for clinical reasons.
  • Ongoing inclusion; annual inclusion rate is about 75-100 patients.
  • Current cohort size is approximately 1500 patients, including > 740 adult and 270 pediatric patients with native biopsies, 180 transplanted patients and 290 living kidney donors (representing the control group). 

Representation of diagnostic groups among adult patients with native kidney biopsies:

  • IgA nephritis, 31 %
  • Hypertension/Nephrosclerosis, 10 %
  • Diabetic Kidney Disease, 8 %
  • Tubulointerstitial nephritis, 8 %
  • Membranous Nephropathy, 7 %
  • ANCA-associated vasculitis/Anti-GBM, 7 %
  • Focal Segmental Glomerulosclerosis, 5 %  
  • Other glomerulonephritis, 5 %
  • Minimal change disease, 4 %
  • Alport/Thin basement membrane disease, 3 %
  • Myeloma/MGRS, 3 %
  • Other/unspecific, 8 %

The biobank also includes a subcohort of patients with chronic kidney disease of Undetermined/Unknown Etiology (CKDu), consisting of kidney biopsies, blood and urine samples from El Salvador (n=8), Nicaragua (n=19), Sri Lanka (n=11) and India (n=18).

Samples and data collection

Biological samples: 

  • Kidney biopsies, blood, and urine at the time of kidney biopsy or transplantation
  • Blood and urine at 5-year follow-up

Clinical data:

  • Information regarding previous medical history and medications
  • Glomerular filtration rate (GFR) determined by iohexol clearance 
  • Anthropometric measurements of body composition, including bone density test (DXA)
  • Lifestyle questionnaires on diet, intake of medicines/drugs, and quality of life

Histopathology: 

  • Light microscopy and electron microscopy (EM)
  • Immunostaining
  • ImmunoEM (iEM)

Omics: 

  • RNA sequencing of RNA isolated from microdissected glomeruli and remaining tissue (tubulointerstitium and vessels) from kidney biopsies
  • Spatial transcriptomics (10X Genomics Visium and Xenium)
  • Metabolomics and proteomics (mass spectrometry) of blood and urine

Biomarkers: 

  • Metabolic, renal, aging, cardiovascular, and inflammatory markers in blood, plasma/serum, and urine 

Prospective data: 

  • Participants are invited to follow-up investigations 5 years after biopsy/transplantation
  • Lab data from annual checkups
  • Outcome data extracted from national registries

 Research group

Anna Levin
Angelina Schwarz
Jessica Smolander
Julia Wijkström
Anna Witasp
Annika Östman Wernerson (PI)

Contributing researchers 

Peter Barany
Annette Bruchfeld
Maria Herthelius
Torbjörn Lundgren
Hannes Olauson
Alexandra Nowak
Lars Wennberg
Emelie Westergren
Salimullah Mohmand, MD, Renal Medicine, Karolinska University Hospital

Recent publications

Transcriptomic Patterns in Adult and Pediatric Patients with IgA Nephropathy or IgA Vasculitis with Nephropathy - PubMed

Kidney transcriptomics signature of prospective rapid diabetic kidney disease progression - PubMed  

Defining the molecular response to ischemia-reperfusion injury and remote ischemic preconditioning in human kidney transplantation - PubMed 

Intranasal Administration of Sugarcane Ash Causes Chronic Kidney Disease in Rats - PubMed

Silica Nanoparticles and Mesoamerican Nephropathy: A Case Series - PubMed

Deep learning-based segmentation and quantification of podocyte foot process morphology suggests differential patterns of foot process effacement across kidney pathologies - PubMed

Fibroblast growth factor 23 is independently associated with renal magnesium handling in patients with chronic kidney disease - PubMed

Clinical findings and kidney morphology in chronic kidney disease of unknown cause in India - PubMed

The role of dendrin in IgA nephropathy - PubMed

Inhaled silica nanoparticles cause chronic kidney disease in rats - PubMed

Mesoamerican Nephropathy and Kidney Disease Progression: A Case Series of Individuals With Kidney Biopsies From Nicaragua and El Salvador - PubMed

Retinoic acid receptor responder1 promotes development of glomerular diseases via the Nuclear Factor-κB signaling pathway - PubMed

Single-cell RNA sequencing reveals the mesangial identity and species diversity of glomerular cell transcriptomes - PubMed

A fast and simple clearing and swelling protocol for 3D in-situ imaging of the kidney across scales - PubMed

Novel insights into the disease transcriptome of human diabetic glomeruli and tubulointerstitium - PubMed

"Dysmorphic" lysosomes in proximal tubular cells are not specific for CINAC/CKDu and do not provide evidence that CINAC/CKDu is a toxin-induced disease - PubMed

Renal Biopsy Project - Research Group Wernerson

Renal Epidemiology and Clinical Trials

Renal Medicine at Novum (Baxter Novum)

We focus on research in renal medicine, chronic kidney disease and kidney failure, its complications such as cardiovascular disease, metabolic alterations, malnutrition and inflammation, and its treatment including dialysis therapies, especially peritoneal dialysis.

Renal Medicine at Novum - Bengt Lindholm Group

Renal Medicine at Baxter Novum - Research Group

Vascular Progeria

The work on early vascular aging (EVA) focuses on how chronic kidney disease (CKD), inflammation, oxidative stress, and metabolic disturbances accelerate biological aging of the vascular system. 

Patients with CKD exhibit premature vascular calcification and endothelial dysfunction, resembling the vascular phenotype of much older individuals. The basis for the studies include prospective studies of incident dialysis patients and CKD5 patients undergoing living donor transplantation. Biopsies of arteries, muscles and fat are collected for detailed studies. 

Key aspects of the research include: Malnutrition-inflammation-atherosclerosis (MIA) syndrome - a triad as a major driver of early vascular aging and mortality in CKD. The studies demonstrated how accumulation of toxins and oxidative damage promote vascular stiffness and calcification and explored how evolutionary trade-offs - such as mechanisms once advantageous for survival - may now predispose humans to vascular aging under modern conditions. The studies highlight the roles of fetuin-A, Nrf2, senescence, klotho, somatic mutations and inflammation-related microRNAs as possible therapeutic targets for EVA.

Key papers

  • Hobson S, et al. Accelerated vascular ageing in chronic kidney disease: the potential for novel therapies. Circ Res. 2023;132(8):950-969.
  • Revêchon G, et al. Recurrent somatic mutation and progerin expression in early vascular aging of chronic kidney disease. Nat Aging. 2025;5(6):1046-1062.
Vascular Progeria - Research Group
Content reviewer:
10-12-2025