Annika Karlsson

Publikationer
Forskningsbidrag
CV
Populärvetenskap och samverkan

Artiklar

Article: SCIENCE TRANSLATIONAL MEDICINE. 2023;15(704):eadg9452
Additive effects of booster mRNA vaccination and SARS-CoV-2 Omicron infection on T cell immunity across immunocompromised states
Muller TRR; Sekine T; Trubach D; Niessl J; Chen P; Bergman P; Blennow O; Hansson L; Mielke S; Nowak P; Vesterbacka J; Akber M; Olofsson A; Hernandez SPA; Gao Y; Cai C; Soderdahl G; Smith CIE; Osterborg A; Lore K; Sallberg Chen M; Ljungman P; Ljunggren H-G; Karlsson ACC; Saini SK; Aleman S; Buggert M
Journal article: JOURNAL OF IMMUNOLOGY. 2023;210(1_Supplement):75.20
Pre-existing SARS-CoV-2-reactive CD4 +T cells are established and highly functional in early childhood
Olofsson A; Humbert M; Niessl J; Hodcroft E; Gao Y; Sohlberg E; Malmberg K-J; Lund-Johansen F; Björkhem-Bergman L; Jenmalm MC; Ljunggren H-G; Buggert M; Karlsson AC
Journal article: JOURNAL OF IMMUNOLOGY. 2023;210(1_Supplement):75.16
Anamnestic expansion of Omicron-reactive CD8 +T cells after booster SARS-CoV-2 mRNA vaccination across different immunocompromised states
Müller TR; Sekine T; Trubach D; Niessl J; Olofsson A; Gao Y; Cai C; Nowak P; Blennow O; Hansson L; Mielke S; Bergman P; Ljunggren H-G; Karlsson AC; Saini SK; Aleman S; Buggert M
Article: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2023;120(12):e2220320120
Functional SARS-CoV-2 cross-reactive CD4⁺ T cells established in early childhood decline with age
Humbert M; Olofsson A; Wullimann D; Niessl J; Hodcroft EB; Cai C; Gao Y; Sohlberg E; Dyrdak R; Mikaeloff F; Neogi U; Albert J; Malmberg K-J; Lund-Johansen F; Aleman S; Bjorkhem-Bergman L; Jenmalm MC; Ljunggren H-G; Buggert M; Karlsson AC
Article: CELLS. 2022;11(19):3142
Hierarchical Clustering and Trajectory Analyses Reveal Viremia-Independent B-Cell Perturbations in HIV-2 Infection
Johansson E; Kerkman PF; Scharf L; Lindman J; Szojka ZI; Mansson F; Biague A; Medstrand P; Norrgren H; Buggert M; Karlsson AC; Forsell MNE; Esbjornsson J; Jansson M
Article: NATURE MEDICINE. 2022;28(3):472-476
Ancestral SARS-CoV-2-specific T cells cross-recognize the Omicron variant
Gao Y; Cai C; Grifoni A; Muller TR; Niessl J; Olofsson A; Humbert M; Hansson L; Osterborg A; Bergman P; Chen P; Olsson A; Sandberg JK; Weiskopf D; Price DA; Ljunggren H-G; Karlsson AC; Sette A; Aleman S; Buggert M
Journal article: NATURE MEDICINE. 2022
Ancestral SARS-CoV-2-specific T cells cross-recognize Omicron
Gao Y; Cai C; Grifoni A; Müller TR; Niessl J; Olofsson A; Humbert M; Hansson L; Österborg A; Bergman P; Chen P; Olsson A; Sandberg JK; Weiskopf D; Price DA; Ljunggren H-G; Karlsson AC; Sette A; Aleman S; Buggert M
Article: SCIENCE IMMUNOLOGY. 2021;6(64):eabk0894
Identification of resident memory CD8⁺ T cells with functional specificity for SARS-CoV-2 in unexposed oropharyngeal lymphoid tissue
Niessl J; Sekine T; Lange J; Konya V; Forkel M; Maric J; Rao A; Mazzurana L; Kokkinou E; Weigel W; Llewellyn-Lacey S; Hodcroft EB; Karlsson AC; Fehrm J; Sundman J; Price DA; Mjosberg J; Friberg D; Buggert M
Article: FRONTIERS IN IMMUNOLOGY. 2021;12:744530
Inverted CD8 T-Cell Exhaustion and Co-Stimulation Marker Balance Differentiate Aviremic HIV-2-Infected From Seronegative Individuals
Scharf L; Pedersen CB; Johansson E; Lindman J; Olsen LR; Buggert M; Wilhelmson S; Mansson F; Esbjornsson J; Biague A; Medstrand P; Norrgren H; Karlsson AC; Jansson M
Article: SCIENCE IMMUNOLOGY. 2020;5(53):eabe8063
The known unknowns of T cell immunity to COVID-19
Karlsson AC; Humbert M; Buggert M
Article: JOURNAL OF VIROLOGY. 2020;94(14):e02128-e02119
Delayed Expression of PD-1 and TIGIT on HIV-Specific CD8 T Cells in Untreated HLA-B*57:01 Individuals Followed from Early Infection
Scharf L; Tauriainen J; Buggert M; Hartogensis W; Nolan DJ; Deeks SG; Salemi M; Hecht FM; Karlsson AC
Article: JOURNAL OF INFECTIOUS DISEASES. 2018;218(3):453-465
Human Immunodeficiency Virus-Infected Women Have High Numbers of CD103^-CD8⁺ T Cells Residing Close to the Basal Membrane of the Ectocervical Epithelium
Gibbs A; Buggert M; Edfeldt G; Ranefall P; Introini A; Cheuk S; Martini E; Eidsmo L; Ball TB; Kimani J; Kaul R; Karlsson AC; Wahlby C; Broliden K; Tjernlund A
Article: PLOS PATHOGENS. 2018;14(4):e1006973
Limited immune surveillance in lymphoid tissue by cytolytic CD4+T cells during health and HIV disease
Buggert M; Nguyen S; McLane LM; Steblyanko M; Anikeeva N; Paquin-Proulx D; Del Rio Estrada PM; Ablanedo-Terrazas Y; Noyan K; Reuter MA; Demers K; Sandberg JK; Eller MA; Streeck H; Jansson M; Nowak P; Sonnerborg A; Canaday DH; Naji A; Wherry EJ; Robb ML; Deeks SG; Reyes-Teran G; Sykulev Y; Karlsson AC; Betts MR
Journal article: JOURNAL OF IMMUNOLOGY. 2017;198(1_Supplement):78.25
HIV-induced modifications of TIGIT expression impair CD8 T cell polyfunctionality
Scharf L; Tauriainen J; Frederiksen J; Naji A; Ljunggren H-G; Sönnerborg A; Lund O; Reyes-Terán G; Hecht FM; Deeks SG; Betts MR; Buggert M; Karlsson AC
Article: TRANSLATIONAL CANCER RESEARCH. 2017;6:S65-S67
Genetic footprints of T cell exhaustion
Buggert M; Tauriainen J; Karlsson AC
Article: SCIENTIFIC REPORTS. 2017;7:40354
Perturbed CD8⁺ T cell TIGIT/CD226/PVR axis despite early initiation of antiretroviral treatment in HIV infected individuals
Tauriainen J; Scharf L; Frederiksen J; Naji A; Ljunggren H-G; Sonnerborg A; Lund O; Reyes-Teran G; Hecht FM; Deeks SG; Betts MR; Buggert M; Karlsson AC
Article: JOURNAL OF EXPERIMENTAL MEDICINE (JEM). 2017;214(1):91-106
Combined immunodeficiency and Epstein-Barr virus-induced B cell malignancy in humans with inherited CD70 deficiency
Abolhassani H; Edwards ESJ; Ikinciogullari A; Jing H; Borte S; Buggert M; Du L; Matsuda-Lennikov M; Romano R; Caridha R; Bade S; Zhang Y; Frederiksen J; Fang M; Bal SK; Haskologlu S; Dogu F; Tacyildiz N; Matthews HF; McElwee JJ; Gostick E; Price DA; Palendira U; Aghamohammadi A; Boisson B; Rezaei N; Karlsson AC; Lenardo MJ; Casanova J-L; Hammarstrom L; Tangye SG; Su HC; Pan-Hammarstrom Q
Article: AIDS. 2016;30(16):2415-2426
CD4⁺ T cells with an activated and exhausted phenotype distinguish immunodeficiency during aviremic HIV-2 infection
Buggert M; Frederiksen J; Lund O; Betts MR; Biague A; Nielsen M; Tauriainen J; Norrgren H; Medstrand P; Karlsson AC; Jansson M
Article: AIDS. 2016;30(11):1713-1722
Elevated levels of invariant natural killer T-cell and natural killer cell activation correlate with disease progression in HIV-1 and HIV-2 infections
Bachle SM; Malone DFG; Buggert M; Karlsson AC; Isberg P-E; Biague AJ; Norrgren H; Medstrand P; Moll M; Sandberg JK; Jansson M
Article: CLINICAL INFECTIOUS DISEASES. 2016;62(5):655-663
Transmission of HIV Drug Resistance and the Predicted Effect on Current First-line Regimens in Europe
Hofstra LM; Sauvageot N; Albert J; Alexiev I; Garcia F; Struck D; Van de Vijver DAMC; Asjo B; Beshkov D; Coughlan S; Descamps D; Griskevicius A; Hamouda O; Horban A; Van Kasteren M; Kolupajeva T; Kostrikis LG; Liitsola K; Linka M; Mor O; Nielsen C; Otelea D; Paraskevis D; Paredes R; Poljak M; Puchhammer-Stoeckl E; Sonnerborg A; Stanekova D; Stanojevic M; Van Laethem K; Zazzi M; Lepej SZ; Boucher CAB; Schmit J-C; Wensing AMJ
Journal article: PLOS ONE. 2016;11(7):e0160293
Rapid Progressing Allele HLA-B35 Px Restricted Anti-HIV-1 CD8+ T Cells Recognize Vestigial CTL Epitopes (vol 5, e10249, 2010)
Willberg CB; Garrison KE; Jones RB; Meiklejohn DA; Spotts G; Liegler TJ; Ostrowski MA; Karlsson AC; Hecht FM; Nixon DF
Article: JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY. 2015;70(10):2885-2888
Primary resistance to integrase strand-transfer inhibitors in Europe.
Casadellà M; van Ham PM; Noguera-Julian M; van Kessel A; Pou C; Hofstra LM; Santos JR; Garcia F; Struck D; Alexiev I; Bakken Kran AM; Hoepelman AI; Kostrikis LG; Somogyi S; Liitsola K; Linka M; Nielsen C; Otelea D; Paraskevis D; Poljak M; Puchhammer-Stöckl E; Staneková D; Stanojevic M; Van Laethem K; Zidovec Lepej S; Clotet B; Boucher CAB; Paredes R; Wensing AMJ; SPREAD programme
Article: BMC INFECTIOUS DISEASES. 2015;15:175
Virologic and immunologic failure, drug resistance and mortality during the first 24 months postpartum among HIV-infected women initiated on antiretroviral therapy for life in the Mitra plus Study, Dar es Salaam, Tanzania
Ngarina M; Kilewo C; Karlsson K; Aboud S; Karlsson A; Marrone G; Leyna G; Ekstroem AM; Biberfeld G
Article: FRONTIERS IN IMMUNOLOGY. 2015;6:196
Single-cell characterization of in vitro migration and interaction dynamics of T cells expanded with IL-2 and IL-7
Tauriainen J; Gustafsson K; Gothlin M; Gertow J; Buggert M; Frisk TW; Karlsson AC; Uhlin M; Onfelt B
Article: PLOS ONE. 2015;10(9):e0137635
Multidimensional Clusters of CD4+T Cell Dysfunction Are Primarily Associated with the CD4/CD8 Ratio in Chronic HIV Infection
Frederiksen J; Buggert M; Noyan K; Nowak P; Sonnerborg A; Lund O; Karlsson AC
Article: RETROVIROLOGY. 2014;11:105
Persistence of frequently transmitted drug-resistant HIV-1 variants can be explained by high viral replication capacity.
Pingen M; Wensing AMJ; Fransen K; De Bel A; de Jong D; Hoepelman AIM; Magiorkinis E; Paraskevis D; Lunar MM; Poljak M; Nijhuis M; Boucher CAB; SPREAD programme
Article: CYTOMETRY. PART A : THE JOURNAL OF THE INTERNATIONAL SOCIETY FOR ANALYTICAL CYTOLOGY. 2014;85A(11):969-977
NetFCM: A Semi-Automated Web-Based Method for Flow Cytometry Data Analysis
Frederiksen J; Buggert M; Karlsson AC; Lund O
Article: PLOS COMPUTATIONAL BIOLOGY. 2014;10(9):e1003830
Baseline CD4⁺ T Cell Counts Correlates with HIV-1 Synonymous Rate in HLA-B*5701 Subjects with Different Risk of Disease Progression
Norstrom MM; Veras NM; Huang W; Proper MCF; Cook J; Hartogensis W; Hecht FM; Karlsoon AC; Salemi M
Article: BMC INFECTIOUS DISEASES. 2014;14:407
Increase in transmitted resistance to non-nucleoside reverse transcriptase inhibitors among newly diagnosed HIV-1 infections in Europe
Frentz D; Van de Vijver DAMC; Abecasis AB; Albert J; Hamouda O; Jorgensen LB; Kucherer C; Struck D; Schmit J-C; Vercauteren J; Asjo B; Balotta C; Beshkov D; Camacho RJ; Clotet B; Coughlan S; Griskevicius A; Grossman Z; Horban A; Kolupajeva T; Korn K; Kostrikis LG; Liitsola K; Linka M; Nielsen C; Otelea D; Paraskevis D; Paredes R; Poljak M; Puchhammer-Stockl E; Sonnerborg A; Stanekova D; Stanojevic M; Van Wijngaerden E; Wensing AMJ; Boucher CAB
Article: PLOS PATHOGENS. 2014;10(7):e1004251
T-bet and Eomes Are Differentially Linked to the Exhausted Phenotype of CD8+T Cells in HIV Infection
Buggert M; Tauriainen J; Yamamoto T; Frederiksen J; Ivarsson MA; Michaelsson J; Lund O; Hejdeman B; Jansson M; Sonnerborg A; Koup RA; Betts MR; Karlsson AC
Article: JOURNAL OF IMMUNOLOGY. 2014;192(10):4685-4696
Functional Avidity and IL-2/Perforin Production Is Linked to the Emergence of Mutations within HLA-B*5701-Restricted Epitopes and HIV-1 Disease Progression
Buggert M; Norstrom MM; Salemi M; Hecht FM; Karlsson AC
Article: JOURNAL OF IMMUNOLOGY. 2014;192(5):2099-2108
Multiparametric Bioinformatics Distinguish the CD4/CD8 Ratio as a Suitable Laboratory Predictor of Combined T Cell Pathogenesis in HIV Infection
Buggert M; Frederiksen J; Noyan K; Svard J; Barqasho B; Nnerborg AS; Lund O; Nowak P; Karlsson AC
Journal article: PLOS COMPUTATIONAL BIOLOGY. 2014;10(11)
Baseline CD4+ T Cell Counts Correlates inn HIV-1 Synonymous Rate in HLA-B*5701 Subjects with Different Risk of Disease Progression (vol 10, e1003830, 2014)
Karlsson AC
Article: PLOS ONE. 2014;10(4):e0120787
Newly Exerted T Cell Pressures on Mutated Epitopes following Transmission Help Maintain Consensus HIV-1 Sequences
Eriksson EM; Liegler T; Keh CE; Karlsson AC; Holditch SJ; Pilcher CD; Loeb L; Nixon DF; Hecht FM
Article: PLOS ONE. 2014;9(4):e94495
Patterns of Transmitted HIV Drug Resistance in Europe Vary by Risk Group
Frentz D; van de Vijver D; Abecasis A; Albert J; Hamouda O; Jorgensen L; Kucherer C; Struck D; Schmit J-C; Vercauteren J; Asjo B; Balotta C; Bergin C; Beshkov D; Camacho R; Clotet B; Griskevicius A; Grossman Z; Horban A; Kolupajeva T; Korn K; Kostrikis L; Linka KLM; Nielsen C; Otelea D; Paraskevis D; Paredes R; Poljak M; Puchhammer-Stoeckl E; Sonnerborg A; Stanekova D; Stanojevic M; Vandamme A-M; Boucher C; Wensing A
Article: RETROVIROLOGY. 2013;10:36
Limited cross-border infections in patients newly diagnosed with HIV in Europe
Frentz D; Wensing AMJ; Albert J; Paraskevis D; Abecasis AB; Hamouda O; Jorgensen LB; Kuecherer C; Struck D; Schmit J-C; Asjo B; Balotta C; Beshkov D; Camacho RJ; Clotet B; Coughlan S; De Wit S; Griskevicius A; Grossman Z; Horban A; Kolupajeva T; Korn K; Kostrikis LG; Liitsola K; Linka M; Nielsen C; Otelea D; Paredes R; Poljak M; Puchhammer-Stoeckl E; Sonnerborg A; Stanekova D; Stanojevic M; Vandamme A-M; Boucher CAB; Van de Vijver DAMC
Article: AIDS RESEARCH AND HUMAN RETROVIRUSES. 2013;29(3):602-612
Targeting of Conserved Gag-Epitopes in Early HIV Infection Is Associated with Lower Plasma Viral Load and Slower CD4⁺ T Cell Depletion
Perez CL; Milush JM; Buggert M; Eriksson EM; Larsen MV; Liegler T; Hartogensis W; Bacchetti P; Lund O; Hecht FM; Nixon DF; Karlsson AC
Article: AIDS RESEARCH AND HUMAN RETROVIRUSES. 2012;28(11):1434-1443
Identification of Conserved Subdominant HIV Type 1 CD8⁺ T Cell Epitopes Restricted Within Common HLA Supertypes for Therapeutic HIV Type 1 Vaccines
Karlsson I; Kloverpris H; Jensen KJ; Stryhn A; Buus S; Karlsson A; Vinner L; Goulder P; Fomsgaard A
Article: RETROVIROLOGY. 2012;9:81
Treatment-associated polymorphisms in protease are significantly associated with higher viral load and lower CD4 count in newly diagnosed drug-naive HIV-1 infected patients
Theys K; Deforche K; Vercauteren J; Libin P; van de Vijver DAMC; Albert J; Asjo B; Balotta C; Bruckova M; Camacho RJ; Clotet B; Coughlan S; Grossman Z; Hamouda O; Horban A; Korn K; Kostrikis LG; Kucherer C; Nielsen C; Paraskevis D; Poljak M; Puchhammer-Stockl E; Riva C; Ruiz L; Liitsola K; Schmit J-C; Schuurman R; Sonnerborg A; Stanekova D; Stanojevic M; Struck D; Van Laethem K; Wensing AMJ; Boucher CAB; Vandamme A-M
Article: JOURNAL OF VIROLOGY. 2012;86(18):9802-9816
Combination of Immune and Viral Factors Distinguishes Low-Risk versus High-Risk HIV-1 Disease Progression in HLA-B*5701 Subjects
Norstrom MM; Buggert M; Tauriainen J; Hartogensis W; Prosperi MC; Wallet MA; Hecht FM; Salemi M; Karlsson AC
Article: PLOS ONE. 2012;7(3):e33484
Low Prevalence of Transmitted Drug Resistance in Patients Newly Diagnosed with HIV-1 Infection in Sweden 2003-2010
Karlsson A; Bjoerkman P; Bratt G; Ekvall H; Gisslen M; Soennerborg A; Mild M; Albert J
Article: PLOS ONE. 2012;7(7):e39874
Characterization of HIV-Specific CD4+T Cell Responses against Peptides Selected with Broad Population and Pathogen Coverage
Buggert M; Norstrom MM; Czarnecki C; Tupin E; Luo M; Gyllensten K; Sonnerborg A; Lundegaard C; Lund O; Nielsen M; Karlsson AC
Article: EVOLUTIONARY BIOINFORMATICS. 2012;8:261-269
PhyloTempo: A Set of R Scripts for Assessing and Visualizing Temporal Clustering in Genealogies Inferred from Serially Sampled Viral Sequences
Norstrom MM; Prosperi MCF; Gray RR; Karlsson AC; Salemi M
Article: AIDS RESEARCH AND HUMAN RETROVIRUSES. 2011;27(10):1055-1059
Short Communication: High Prevalence of Drug Resistance in HIV Type 1-Infected Children Born in Honduras and Belize 2001 to 2004
Parham L; Lorenzana de Rivera I; Murillo W; Naver L; Largaespada N; Albert J; Karlsson AC
Article: HUMAN IMMUNOLOGY. 2010;71(7):733-735
Identification of HLA-DPA1*020107 in an individual of Ugandan descent
Czarnecki C; Luo M; Brunham R; Broliden K; Karlsson AC; Plummer FA
Article: JOURNAL OF IMMUNOLOGY. 2010;184(9):5383-5391
Interdisciplinary Analysis of HIV-Specific CD8⁺ T Cell Responses against Variant Epitopes Reveals Restricted TCR Promiscuity
Hoof I; Perez CL; Buggert M; Gustafsson RKL; Nielsen M; Lund O; Karlsson AC
Article: AIDS. 2010;24(7):969-974
Induction of systemic HIV-1-specific cellular immune responses by oral exposure in the uninfected partner of discordant couples
Perez CL; Hasselrot K; Bratt G; Broliden K; Karlsson AC
Article: PLOS ONE. 2010;5(4):e10249
Rapid Progressing Allele HLA-B35 Px Restricted Anti-HIV-1 CD8+T Cells Recognize Vestigial CTL Epitopes
Willberg CB; Garrison KE; Jones RB; Meiklejohn DJ; Spotts G; Liegler TJ; Ostrowski MA; Karlsson AC; Hecht FM; Nixon DF
Article: HIV MEDICINE. 2010;11(2):95-103
Prevalence of drug resistance and importance of viral load measurements in Honduran HIV-infected patients failing antiretroviral treatment
Murillo W; de Rivera IL; Parham L; Jovel E; Palou E; Karlsson AC; Albert J
Article: AIDS RESEARCH AND THERAPY. 2009;6:15
Reduction of the HIV-1 reservoir in resting CD4+ T-lymphocytes by high dosage intravenous immunoglobulin treatment: a proof-of-concept study.
Lindkvist A; Edén A; Norström MM; Gonzalez VD; Nilsson S; Svennerholm B; Karlsson AC; Sandberg JK; Sönnerborg A; Gisslén M
Article: RETROVIROLOGY. 2009;6:49
Tracing the HIV-1 subtype B mobility in Europe: a phylogeographic approach
Paraskevis D; Pybus O; Magiorkinis G; Hatzakis A; Wensing AMJ; de Vijver DAV; Albert J; Angarano G; Asjo B; Balotta C; Boeri E; Camacho R; Chaix M-L; Coughlan S; Costagliola D; De Luca A; de Mendoza C; Derdelinckx I; Grossman Z; Hamouda O; Hoepelman IM; Horban A; Korn K; Kuecherer C; Leitner T; Loveday C; MacRae E; Maljkovic-Berry I; Meyer L; Nielsen C; de Coul ELMO; Ormaasen V; Perrin L; Puchhammer-Stoeckl E; Ruiz L; Salminen MO; Schmit J-C; Schuurman R; Soriano V; Stanczak J; Stanojevic M; Struck D; Van Laethem K; Violin M; Yerly S; Zazzi M; Boucher CA; Vandamme A-M
Article: JOURNAL OF IMMUNOLOGY. 2008;180(7):5092-5100
Broadly immunogenic HLA class I supertype-restricted elite CTL epitopes recognized in a diverse population infected with different HIV-1 subtypes
Perez CL; Larsen MV; Gustafsson R; Norstroem MM; Atlas A; Nixon DF; Nielsen M; Lund O; Karlsson AC
Article: JOURNAL OF VIROLOGY. 2007;81(20):11543-11548
Antiretroviral drug therapy alters the profile of human immunodeficiency virus type 1-specific T-cell responses and shifts the immunodominant cytotoxic T-lymphocyte response from gag to pol
Karlsson AC; Chapman JM; Heiken BD; Hoh R; Kallas EG; Martin JN; Hecht FM; Deeks SG; Nixon DF
Article: PLOS ONE. 2007;2(2):e225
Sequential Broadening of CTL Responses in Early HIV-1 Infection Is Associated with Viral Escape
Karlsson AC; Iversen AKN; Chapman JM; de Oliveira T; Spotts G; McMichael AJ; Davenport MP; Hecht FM; Nixon DF
Article: VIROLOGY. 2006;347(1):117-126
CD8 T cell effector maturation in HIV-1-infected children
Jordan KA; Furlan SN; Gonzalez VD; Karlsson AC; Quigley MF; Deeks SG; Rosenberg MG; Nixon DF; Sandberg JK
Article: CLINICAL INFECTIOUS DISEASES. 2006;42(5):700-708
Seroreversion in subjects receiving antiretroviral therapy during acute/early HIV infection
Hare CB; Pappalardo BL; Busch MP; Karlsson AC; Phelps BH; Alexander SS; Bentsen C; Ramstead CA; Nixon DF; Levy JA; Hecht FM
Article: JOURNAL OF IMMUNOLOGICAL METHODS. 2004;288(1-2):135-147
ELISPOT cell rescue
Meiklejohn DA; Karlsson RK; Karlsson AC; Chapman JM; Nixon DF; Schweighardt B
Article: AIDS. 2004;18(7):981-989
Immunologic and virologic evolution during periods of intermittent and persistent low-level viremia
Karlsson AC; Younger SR; Martin JN; Grossman Z; Sinclair E; Hunt PW; Hagos E; Nixon DF; Deeks SG
Article: JOURNAL OF IMMUNOLOGICAL METHODS. 2003;283(1-2):141-153
Comparison of the ELISPOT and cytokine flow cytometry assays for the enumeration of antigen-specific T cells
Karlsson AC; Martin JN; Younger SR; Bredt BM; Epling L; Ronquillo R; Varma A; Deeks SG; McCune JM; Nixon DF; Sinclair E
Article: JOURNAL OF VIROLOGY. 2003;77(12):6743-6752
Dual pressure from antiretroviral therapy and cell-mediated immune response on the human immunodeficiency virus type 1 protease gene
Karlsson AC; Deeks SG; Barbour JD; Heiken BD; Younger SR; Hoh R; Lane M; Sällberg M; Ortiz GM; Demarest JF; Liegler T; Grant RM; Martin JN; Nixon DF
Article: HIV MEDICINE. 2002;3(1):1-11
The selection and evolution of viral quasispecies in HIV-1 infected children.
Nowak P; Karlsson AC; Naver L; Bohlin AB; Piasek A; Sönnerborg A
Article: JOURNAL OF INFECTIOUS DISEASES. 2001;184(11):1392-1401
Recent origin of human immunodeficiency virus type 1 variants in resting CD4⁺ T lymphocytes in untreated and suboptimally treated subjects
Karlsson AC; Lindkvist A; Lindbäck S; Gaines H; Sönnerborg A
Article: AIDS RESEARCH AND HUMAN RETROVIRUSES. 2001;17(5):409-416
Initiation of therapy during primary HIV type 1 infection results in a continuous decay of proviral DNA and a highly restricted viral evolution
Karlsson AC; Birk M; Lindbäck S; Gaines H; Mittler JE; Sönnerborg A
Article: AIDS. 2000;14(15):2333-2339
Diagnosis of primary HIV-1 infection and duration of follow-up after HIV exposure
Lindbäck S; Thorstensson R; Karlsson AC; von Sydow M; Flamholc L; Blaxhult A; Sönnerborg A; Biberfeld G; Gaines H
Article: AIDS. 2000;14(15):2283-2291
Viral dynamics in primary HIV-1 infection
Lindbäck S; Karlsson AC; Mittler J; Blaxhult A; Carlsson M; Briheim G; Sönnerborg A; Gaines H
Article: JOURNAL OF VIROLOGY. 1999;73(7):6191-6196
Reappearance of founder virus sequence in human immunodeficiency virus type 1-infected patients
Karlsson AC; Gaines H; Sällberg M; Lindbäck S; Sönnerborg A
Article: AIDS. 1998;12(8):839-847
Characterization of the viral population during primary HIV-1 infection
Karlsson AC; Lindbäck S; Gaines H; Sönnerborg A
Visa fler

Alla övriga publikationer

Conference publication: JOURNAL OF IMMUNOLOGY. 2023;210(1)
Anamnestic expansion of Omicron-reactive CD8+T cells after booster SARS-CoV-2 mRNA vaccination across different immunocompromised states
Mueller TR; Sekine T; Trubach D; Niessl J; Olofsson A; Gao Y; Cai C; Nowak P; Blennow O; Hansson L; Mielke S; Bergman P; Ljunggren H-G; Karlsson AC; Saini SK; Aleman S; Buggert M
Conference publication: ACTA OBSTETRICIA ET GYNECOLOGICA SCANDINAVICA. 2023;102:19
Pregnancy management of women living with human immunodeficiency virus 2010-2019 in Stockholm, Sweden
Pettersson K; Jones E; Pettersson K; Naver L; Karlsson A
Conference publication: JOURNAL OF IMMUNOLOGY. 2023;210(1)
Pre-existing SARS-CoV-2-reactive CD4⁺ T cells are established and highly functional in early childhood
Olofsson A; Humbert M; Niessl J; Hodcroft E; Gao Y; Sohlberg E; Malmberg K-J; Lund-Johansen F; Bjorkhem-Bergman L; Jenmalm MC; Ljunggren H-G; Buggert M; Karlsson AC
Preprint: RESEARCH SQUARE. 2022
Ancestral SARS-CoV-2-specific T cells cross-recognize Omicron (B.1.1.529)
Gao Y; Cai C; Grifoni A; Müller T; Niessl J; Olofsson A; Humbert M; Hansson L; Österborg A; Bergman P; Chen P; Olsson A; Sandberg J; Weiskopf D; Price D; Ljunggren H-G; Karlsson A; Sette A; Aleman S; Buggert M
Conference publication: SCANDINAVIAN JOURNAL OF IMMUNOLOGY. 2017;86(4):318
Modifications of TIGIT expression contribute to CD8 T cell exhaustion in chronic virus infection
Tauriainen J; Scharf L; Frederiksen J; Naji A; Ljunggren H-G; Sonnerborg A; Lund O; Reyes-Teran G; Hecht FM; Deeks SG; Betts MR; Buggert M; Karlsson AC
Conference publication: JOURNAL OF IMMUNOLOGY. 2017;198(1)
HIV-induced modifications of TIGIT expression impair CD8 T cell polyfunctionality
Scharf L; Tauriainen J; Frederiksen J; Naji A; Ljunggren H-G; Sonnerborg A; Lund O; Reyes-Teran G; Hecht FM; Deeks SG; Betts MR; Buggert M; Karlsson AC
Conference publication: JOURNAL OF CLINICAL IMMUNOLOGY. 2017;37(2):230
COMBINED IMMUNODEFICIENCY AND EPSTEIN-BARR VIRUS-INDUCED B CELL MALIGNANCY IN HUMANS WITH INHERITED CD70 DEFICIENCY
Jing H; Abolhassani H; Edwards ESJ; Ikinciogullari KA; Borte S; Buggert M; Du L; Lennikov M; Romano R; Caridha R; Bade S; Zhang Y; Frederiksen J; Fang M; Bal SK; Haskologlu S; Dogu F; Tacyildiz N; Matthews HF; McElwee JJ; Gostick E; Price DA; Palendira U; Aghamohammadi A; Boisson B; Rezaei N; Karlsson A; Lenardo MJ; Casanova J-L; Hammarstrom L; Tangye SG; Pan-Hammarstrom Q; Su HC
Conference publication: SCANDINAVIAN JOURNAL OF IMMUNOLOGY. 2017;86(4):288-289
Increased numbers of CD103^-CD8⁺ T_RM cells in the cervical mucosa of HIV-infected women
Gibbs A; Buggert M; Edfeldt G; Ranefall P; Introini A; Cheuk S; Martini E; Eidsmo L; Hirbod T; Ball TB; Kimani J; Kaul R; Karlsson AC; Wahlby C; Broliden K; Tjernlund A
Conference publication: AIDS RESEARCH AND HUMAN RETROVIRUSES. 2016;32:307
Analysis of the Distribution of CD103 on CD8 T Cells in Blood and Genital Mucosa of HIV-infected Female Sex Workers
Gibbs A; Buggert M; Ranefall P; Introini A; Cheuk S; Eidsmo L; Hirbod T; Ball TB; Kimani J; Kaul R; Karlsson AC; Wahlby C; Broliden K; Tjernlund A
Conference publication: SCANDINAVIAN JOURNAL OF IMMUNOLOGY. 2013;77(4):325
NetFCM: A Tool for Automated Flow Cytometric Data Analysis
Frederiksen J; Lund O; Buggert M; Karlsson A
Review: NEW MICROBIOLOGICA. 2012;35(2):101-111
Towards a new paradigm linking virus molecular evolution and pathogenesis: experimental design and phylodynamic inference
Norstrom MM; Karlsson AC; Salemi M
Conference publication: AIDS RESEARCH AND HUMAN RETROVIRUSES. 2011;27(10):A88
Interdisciplinary Evaluation of Broadly-Reactive HLA Class II Restricted Epitopes Eliciting HIV-Specific CD4+T Cell Responses
Buggert M; Norstrom M; Lundegaard C; Lund O; Nielsen M; Karlsson AC
Conference publication: ANTIVIRAL THERAPY. 2011;16:A139
Drug resistance in an MTCT programme in Honduras
Parham L; Lorenzana IJ; Albert J; Karlsson A
Conference publication: 2010;:658-659
PopCover
Lundegaard C; Buggert M; Karlsson A; Lund O; Perez C; Nielsen M
Meeting abstract: RETROVIROLOGY. 2009;6:p231
Induction of systemic HIV-1 specific cellular immune responses by oral exposure in exposed uninfected partner of discordant couples
Perez C; Hasselrot K; Broliden K; Karlsson A
Letter: THE LANCET. 2005;365(9475):1924-1925
Multidrug-resistant, dual-tropic HIV-1 and rapid progression
Nixon DF; Deeks SG; Shacklett BL; Karlsson AC
Thesis / dissertation: 2000
Viral dynamics and evolution following primary HIV-1 infection
Karlsson, Annika C

Forskningsbidrag

Clinical and translational studies on cancer related fatigue in palliative care. Focus on vitamin D and the immune system.
Swedish Research Council
1 January 2023 - 31 December 2025
Cellular and molecular dynamics of antigen-specific T cells in HIV-treated children, pregnant women, and human cancer affecting immune function, development and health
Swedish Research Council
1 January 2021 - 31 December 2023
Molecular dynamics of T cell exhaustion in human viral infection and cancer affecting immune recovery and health
Swedish Research Council
1 January 2018 - 31 December 2020
A translational approach to link clinical, virological and immunological findings toward a functional cure for HIV
Swedish Research Council
1 January 2013 - 31 December 2017
The impact, role, and consequences of HIV-1 immune escape mutations on viral fitness, immune function, and clinical outcome
Swedish Research Council
1 January 2010 - 31 December 2012

Anställningar

Lektor, Laboratoriemedicin, Karolinska Institutet, 2024-

Examina och utbildning

Docent, Virologi, Karolinska Institutet, 2009
MEDICINE DOKTORSEXAMEN, Institutionen för laboratoriemedicin, Karolinska Institutet, 2000
LICENTIATEXAMEN, Institutionen för laboratoriemedicin, Karolinska Institutet, 1998

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Examina och utbildning

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