Anastasios Damdimopoulos
Forskningsinfrastrukturspecialist
E-postadress: anastasios.damdimopoulos@ki.se
Besöksadress: Blickagången 16, 14152 Flemingsberg
Postadress: H7 Medicin, Huddinge, H7 GUT BEA, 171 77 Stockholm
Om mig
- Bioinformatician at BEA (Bioinformatics and Expression Analysis) core
facility and CBB (Centre for Bioinformatics and Biostatistics)
I hold a PhD in molecular and cellular biology but eventually transitioned
into the field of bioinformatics. My initial focus encompassed the analysis
of microarray gene expression studies and chromatin immunoprecipitation
sequencing. Since then, I have acquired extensive experience in numerous
applications where massively parallel sequencing can be applied.
Specifically, my expertise extends to gene expression analysis (RNAseq),
chromatin exploration (ChIPseq, ATACseq, RRBS), single-cell analysis, and
extensive data visualization. I am proficient in R, which serves as the
primary platform for conducting analyses. Furthermore, I have developed a
robust understanding of Linux and bash scripting, essential for big data
management and many analysis pipelines.
Due to my position at the BEA core facility, I have actively contributed to
numerous projects spanning a broad spectrum of biological systems. This
includes diverse areas such as cancer dynamics, developmental processes, and
immune responses, encompassing a wide range of organisms from humans to
viruses.
Artiklar
- Article: ENVIRONMENT INTERNATIONAL. 2024;187:108710Li T; Bjorvang RD; Hao J; Di Nisio V; Damdimopoulos A; Lindskog C; Papaikonomou K; Damdimopoulou P
- Article: REPRODUCTIVE TOXICOLOGY. 2023;119:108393Tarvainen I; Soto DA; Laws MJ; Bjorvang RD; Damdimopoulos A; Roos K; Li T; Kramer S; Li Z; Lavogina D; Visser N; Kallak TK; Lager S; Gidlof S; Edlund E; Papaikonomou K; Oberg M; Olovsson M; Salumets A; Velthut-Meikas A; Flaws JA; Damdimopoulou P
- Journal article: STEM CELLS. 2023;41(2):205-206Reply: Revisiting Claims of the Continued Absence of Functional Germline Stem Cells in Adult OvariesYoshihara M; Wagner M; Damdimopoulos A; Zhao C; Petropoulos S; Katayama S; Kere J; Lanner F; Damdimopoulou P
- Journal article: STEM CELLS. 2023;41(2):105-110Yoshihara M; Wagner M; Damdimopoulos A; Zhao C; Petropoulos S; Katayama S; Kere J; Lanner F; Damdimopoulou P
- Article: CANCERS. 2023;15(4):1298Huang D; Berglund M; Damdimopoulos A; Antonson P; Lindskog C; Enblad G; Amini R-M; Okret S
- Article: TOXICOLOGY. 2023;485:153425Li T; Vazakidou P; Leonards PEG; Damdimopoulos A; Panagiotou EM; Arnelo C; Jansson K; Pettersson K; Papaikonomou K; van Duursen M; Damdimopoulou P
- Article: ISCIENCE. 2022;25(12):105526Erlandsson MC; Andersson KME; Oparina NY; Chandrasekaran V; Saghy T; Damdimopoulos A; Garcia-Bonete M-J; Einbeigi Z; Silfversward ST; Pekna M; Katona G; Bokarewa MI
- Article: MOLECULAR PSYCHIATRY. 2022;27(8):3247-3261Matlik K; Garton DR; Montano-Rodriguez AR; Olfat S; Eren F; Casserly L; Damdimopoulos A; Panhelainen A; Porokuokka LL; Kopra JJ; Turconi G; Schweizer N; Bereczki E; Piehl F; Engberg G; Cervenka S; Piepponen TP; Zhang F-P; Sipila P; Jakobsson J; Sellgren CM; Erhardt S; Andressoo J-O
- Article: CANCERS. 2022;14(13):3098Huang D; Huang Z; Indukuri R; Revanna CB; Berglund M; Guan J; Yakimchuk K; Damdimopoulos A; Williams C; Okret S
- Article: PLOS PATHOGENS. 2022;18(5):e1010494Bradley F; Boger MF; Kaldhusdal V; Ahlberg A; Edfeldt G; Lajoie J; Bergstrom S; Omollo K; Damdimopoulos A; Czarnewski P; Manberg A; Oyugi J; Kimani J; Nilsson P; Fowke K; Tjernlund A; Broliden K
- Article: ISCIENCE. 2022;25(4):104137Vuoristo S; Bhagat S; Hyden-Granskog C; Yoshihara M; Gawriyski L; Jouhilahti E-M; Ranga V; Tamirat M; Huhtala M; Kirjanov I; Nykanen S; Krjutskov K; Damdimopoulos A; Weltner J; Hashimoto K; Recher G; Ezer S; Paluoja P; Paloviita P; Takegami Y; Kanemaru A; Lundin K; Airenne TT; Otonkoski T; Tapanainen JS; Kawaji H; Murakawa Y; Burglin TR; Varjosalo M; Johnson MS; Tuuri T; Katayama S; Kere J
- Article: METHODS IN MOLECULAR BIOLOGY. 2022;2418:203-221Indukuri R; Damdimopoulos A; Williams C
- Article: ACTA PHYSIOLOGICA. 2021;233(1):e13668Burmakin M; Fasching A; Kobayashi H; Urrutia AA; Damdimopoulos A; Palm F; Haase VH
- Article: INTERNATIONAL JOURNAL OF CANCER. 2021;149(3):692-706Indukuri R; Jafferali MH; Song D; Damdimopoulos A; Hases L; Zhao C; Archer A; Williams C
- Article: MOLECULAR CELL. 2021;81(5):953-968.e9Huang Z; Liang N; Goni S; Damdimopoulos A; Wang C; Ballaire R; Jager J; Niskanen H; Han H; Jakobsson T; Bracken AP; Aouadi M; Venteclef N; Kaikkonen MU; Fan R; Treuter E
- Article: DEVELOPMENTAL DYNAMICS. 2020;249(12):1500-1513Wong J; Damdimopoulos A; Damdimopoulou P; Gasperoni JG; Tran SC; Grommen SVH; De Groef B; Dworkin S
- Article: JOURNAL OF ASSISTED REPRODUCTION AND GENETICS. 2020;37(9):2137-2150Hao J; Tuck AR; Prakash CR; Damdimopoulos A; Sjodin MOD; Lindberg J; Niklasson B; Pettersson K; Hovatta O; Damdimopoulou P
- Journal article: OBSTETRICAL & GYNECOLOGICAL SURVEY. 2020;75(6):354-355Wagner M; Yoshihara M; Douagi I; Damdimopoulos A; Panula S; Petropoulos S; Lu H; Pettersson K; Palm K; Katayama S; Hovatta O; Kere J; Lanner F; Damdimopoulou P
- Article: NATURE COMMUNICATIONS. 2020;11(1):1147Wagner M; Yoshihara M; Douagi I; Damdimopoulos A; Panula S; Petropoulos S; Lu H; Pettersson K; Palm K; Katayama S; Hovatta O; Kere J; Lanner F; Damdimopoulou P
- Article: SCIENTIFIC REPORTS. 2019;9(1):8411Madissoon E; Damdimopoulos A; Katayama S; Krjutskov K; Einarsdottir E; Mamia K; De Groef B; Hovatta O; Kere J; Damdimopoulou P
- Article: FREE RADICAL BIOLOGY AND MEDICINE. 2019;137:59-73Chasapis CT; Makridakis M; Damdimopoulos AE; Zoidakis J; Lygirou V; Mavroidis M; Vlahou A; Miranda-Vizuete A; Spyrou G; Vlamis-Gardikas A
- Article: NATURE COMMUNICATIONS. 2019;10(1):1684Liang N; Damdimopoulos A; Goni S; Huang Z; Vedin L-L; Jakobsson T; Giudici M; Ahmed O; Pedrelli M; Barilla S; Alzaid F; Mendoza A; Schroder T; Kuiper R; Parini P; Hollenberg A; Lefebvre P; Francque S; Van Gaal L; Staels B; Venteclef N; Treuter E; Fan R
- Article: FASEB JOURNAL. 2019;33(2):1631-1643Huang Z; Liang N; Damdimopoulos A; Fan R; Treuter E
- Article: ENDOCRINOLOGY. 2016;157(10):3719-3730Kemilainen H; Adam M; Maki-Jouppila J; Damdimopoulou P; Damdimopoulos AE; Kere J; Hovatta O; Laajala TD; Aittokallio T; Adamski J; Ryberg H; Ohlsson C; Strauss L; Poutanen M
- Article: NATURE MEDICINE. 2016;22(7):780-791Fan R; Toubal A; Goni S; Drareni K; Huang Z; Alzaid F; Ballaire R; Ancel P; Liang N; Damdimopoulos A; Hainault I; Soprani A; Aron-Wisnewsky J; Foufelle F; Lawrence T; Gautier J-F; Venteclef N; Treuter E
- Article: BIOSCIENCE REPORTS. 2015;35(6):e00269Nalvarte I; Damdimopoulos AE; Ruegg J; Spyrou G
- Article: REPRODUCTIVE BIOLOGY AND ENDOCRINOLOGY. 2011;9(1):128Turunen HT; Sipila P; Pujianto DA; Damdimopoulos AE; Bjorkgren I; Huhtaniemi I; Poutanen M
- Article: JOURNAL OF NUTRITION. 2011;141(9):1583-1589Damdimopoulou P; Nurmi T; Salminen A; Damdimopoulos AE; Kotka M; van der Saag P; Strauss L; Poutanen M; Pongratz I; Makela S
- Article: GENES & DEVELOPMENT. 2010;24(4):381-395Venteclef N; Jakobsson T; Ehrlund A; Damdimopoulos A; Mikkonen L; Ellis E; Nilsson L-M; Parini P; Janne OA; Gustafsson J-A; Steffensen KR; Treuter E
- Article: BIOCHIMICA ET BIOPHYSICA ACTA: INTERNATIONAL JOURNAL OF BIOCHEMISTRY AND BIOPHYSICS. 2009;1793(10):1588-1596Damdimopoulou PE; Miranda-Vizuete A; Arner ESJ; Gustafsson J-A; Damdimopoulos AE
- Article: MOLECULAR CELL. 2009;34(4):510-518Jakobsson T; Venteclef N; Toresson G; Damdimopoulos AE; Ehrlund A; Lou X; Sanyal S; Steffensen KR; Gustafsson J-A; Treuter E
- Article: MOLECULAR AND CELLULAR BIOLOGY. 2009;29(8):2230-2242Ehrlund A; Anthonisen EH; Gustafsson N; Venteclef N; Remen KR; Damdimopoulos AE; Galeeva A; Pelto-Huikko M; Lalli E; Steffensen KR; Gustafsson J-A; Treuter E
- Article: JOURNAL OF BIOLOGICAL CHEMISTRY. 2008;283(5):2814-2821Dammeyer P; Damdimopoulos AE; Nordman T; Jimenez A; Miranda-Vizuete A; Arner ESJ
- Article: ENDOCRINOLOGY. 2008;149(1):339-345Damdimopoulos AE; Spyrou G; Gustafsson J-A
- Article: ENDOCRINOLOGY. 2007;148(10):4875-4886Penttinen P; Jaehrling J; Damdimopoulos AE; Inzunza J; Lemmen JG; van der Saag P; Pettersson K; Gauglitz G; Makela S; Pongratz I
- Article: ENDOCRINOLOGY. 2007;148(7):3196-3204Pujianto DA; Damdimopoulos AE; Sipilae P; Jalkanen J; Huhtaniemi I; Poutanen M
- Article: BIOCHIMICA ET BIOPHYSICA ACTA: INTERNATIONAL JOURNAL OF BIOCHEMISTRY AND BIOPHYSICS. 2007;1773(6):687-690Damdimopoulos AE; Gustafsson J-A; Spyrou G
- Article: JOURNAL OF BIOLOGICAL CHEMISTRY. 2007;282(10):7482-7490Zhou J; Damdimopoulos AE; Spyrou G; Bruene B
- Article: BIOCHEMICAL PHARMACOLOGY. 2005;69(12):1765-1772Madeja Z; Sroka J; Nyström C; Björkhem-Bergman L; Nordman T; Damdimopoulos A; Nalvarte I; Eriksson LC; Spyrou G; Olsson JM; Björnstedt M
- Article: JOURNAL OF BIOLOGICAL CHEMISTRY. 2004;279(52):54510-54517Nalvarte I; Damdimopoulos AE; Nystöm C; Nordman T; Miranda-Vizuete A; Olsson JM; Eriksson L; Björnstedt M; Arnér ESJ; Spyrou G
- Article: JOURNAL OF BIOLOGICAL CHEMISTRY. 2004;279(37):38721-38729Damdimopoulos AE; Miranda-Vizuete A; Treuter E; Gustafsson J; Spyrou G
- Article: FREE RADICAL BIOLOGY AND MEDICINE. 2004;36(10):1270-1278Nalvarte I; Damdimopoulos AE; Spyrou G
- Article: JOURNAL OF BIOLOGICAL CHEMISTRY. 2003;278(15):13133-13142Sadek CM; Jiménez A; Damdimopoulos AE; Kieselbach T; Nord M; Gustafsson JA; Spyrou I; Davis EC; Oko R; van der Hoorn FA; Miranda-Vizuete A
- Article: JOURNAL OF BIOLOGICAL CHEMISTRY. 2003;278(4):2141-2146Xia L; Nordman T; Olsson JM; Damdimopoulos A; Björkhem-Bergman L; Nalvarte I; Eriksson LC; Arnér ESJ; Spyrou G; Björnstedt M
- Article: JOURNAL OF BIOLOGICAL CHEMISTRY. 2003;278(2):1059-1066Cunnea PM; Miranda-Vizuete A; Bertoli G; Simmen T; Damdimopoulos AE; Hermann S; Leinonen S; Huikko MP; Gustafsson J; Sitia R; Spyrou G
- Article: JOURNAL OF BIOLOGICAL CHEMISTRY. 2002;277(36):33249-33257Damdimopoulos AE; Miranda-Vizuete A; Pelto-Huikko M; Gustafsson J; Spyrou G
- Article: GENES TO CELLS. 2001;6(12):1077-1090Sadek CM; Damdimopoulos AE; Pelto-Huikko M; Gustafsson J; Spyrou G; Miranda-Vizuete A
- Article: JOURNAL OF BIOLOGICAL CHEMISTRY. 2001;276(34):31567-31574Miranda-Vizuete A; Ljung J; Damdimopoulos AE; Gustafsson J; Oko R; Pelto-Huikko M; Spyrou G
- Article: MECHANISMS OF DEVELOPMENT. 2000;97(1-2):13-26Sadek CM; Jalaguier S; Feeney EP; Aitola M; Damdimopoulos AE; Pelto-Huikko M; Gustafsson J
- Article: EUROPEAN JOURNAL OF NEUROSCIENCE. 2000;12(5):1669-1678Rybnikova E; Damdimopoulos AE; Gustafsson J; Spyrou G; Pelto-Huikko M
- Article: BIOCHIMICA ET BIOPHYSICA ACTA: INTERNATIONAL JOURNAL OF BIOCHEMISTRY AND BIOPHYSICS. 1999;1447(1):113-118Miranda-Vizuete A; Damdimopoulos AE; Spyrou G
- Article: FEBS JOURNAL. 1999;261(2):405-412Miranda-Vizuete A; Damdimopoulos AE; Pedrajas JR; Gustafsson J; Spyrou G
- Article: MITOCHONDRIAL DNA. 1999;10(3):179-182Miranda-Vizuete A; Pedrajas JR; Damdimopoulos AE; Spyrou G
- Article: JOURNAL OF BIOLOGICAL CHEMISTRY. 1999;274(1):345-353Johansson L; Thomsen JS; Damdimopoulos AE; Spyrou G; Gustafsson J; Treuter E
- Article: JOURNAL OF BIOLOGICAL CHEMISTRY. 1997;272(49):30841-30847Miranda-Vizuete A; Damdimopoulos AE; Gustafsson JA; Spyrou G
- Visa fler
Alla övriga publikationer
- Doctoral thesis: 2003Damdimopoulos AE
- Published conference paper: BIOFACTORS. 2003;18(1-4):45-50Nordman T; Xia L; Björkhem-Bergman L; Damdimopoulos A; Nalvarte I; Arnér ESJ; Spyrou G; Eriksson LC; Björnstedt M; Olsson JM
- Review: ANTIOXIDANTS & REDOX SIGNALING. 2000;2(4):801-810Miranda-Vizuete A; Damdimopoulos AE; Spyrou G
Anställningar
- Forskningsinfrastrukturspecialist, Medicin, Huddinge, Karolinska Institutet, 2024-
Examina och utbildning
- MEDICINE DOKTORSEXAMEN, Institutionen för biovetenskaper och näringslära, Karolinska Institutet, 2003