Anastasios Damdimopoulos
Forskningsinfrastrukturspecialist
E-postadress: anastasios.damdimopoulos@ki.se
Besöksadress: Blickagången 16, 14152 Flemingsberg
Postadress: H7 Medicin, Huddinge, H7 BioNut BEA, 171 77 Stockholm
Om mig
- Bioinformatician at BEA (Bioinformatics and Expression Analysis) core
facility and CBB (Centre for Bioinformatics and Biostatistics)
I hold a PhD in molecular and cellular biology but eventually transitioned
into the field of bioinformatics. My initial focus encompassed the analysis
of microarray gene expression studies and chromatin immunoprecipitation
sequencing. Since then, I have acquired extensive experience in numerous
applications where massively parallel sequencing can be applied.
Specifically, my expertise extends to gene expression analysis (RNAseq),
chromatin exploration (ChIPseq, ATACseq, RRBS), single-cell analysis, and
extensive data visualization. I am proficient in R, which serves as the
primary platform for conducting analyses. Furthermore, I have developed a
robust understanding of Linux and bash scripting, essential for big data
management and many analysis pipelines.
Due to my position at the BEA core facility, I have actively contributed to
numerous projects spanning a broad spectrum of biological systems. This
includes diverse areas such as cancer dynamics, developmental processes, and
immune responses, encompassing a wide range of organisms from humans to
viruses.
Artiklar
- Article: ENVIRONMENT INTERNATIONAL. 2024;187:108710
- Article: REPRODUCTIVE TOXICOLOGY. 2023;119:108393
- Article: CANCERS. 2023;15(4):1298
- Article: TOXICOLOGY. 2023;485:153425
- Article: ISCIENCE. 2022;25(12):105526
- Article: MOLECULAR PSYCHIATRY. 2022;27(8):3247-3261
- Article: PLOS PATHOGENS. 2022;18(5):e1010494
- Article: ISCIENCE. 2022;25(4):104137
- Article: METHODS IN MOLECULAR BIOLOGY. 2022;2418:203-221
- Article: ACTA PHYSIOLOGICA. 2021;233(1):e13668
- Article: INTERNATIONAL JOURNAL OF CANCER. 2021;149(3):692-706
- Article: MOLECULAR CELL. 2021;81(5):953-968.e9
- Article: DEVELOPMENTAL DYNAMICS. 2020;249(12):1500-1513
- Article: JOURNAL OF ASSISTED REPRODUCTION AND GENETICS. 2020;37(9):2137-2150
- Article: NATURE COMMUNICATIONS. 2020;11(1):1147
- Article: SCIENTIFIC REPORTS. 2019;9(1):8411
- Article: FREE RADICAL BIOLOGY AND MEDICINE. 2019;137:59-73
- Article: NATURE COMMUNICATIONS. 2019;10(1):1684
- Article: ENDOCRINOLOGY. 2016;157(10):3719-3730
- Article: NATURE MEDICINE. 2016;22(7):780-791
- Article: BIOSCIENCE REPORTS. 2015;35(6):e00269
- Article: REPRODUCTIVE BIOLOGY AND ENDOCRINOLOGY. 2011;9(1):128
- Article: JOURNAL OF NUTRITION. 2011;141(9):1583-1589
- Article: GENES & DEVELOPMENT. 2010;24(4):381-395
- Article: BIOCHIMICA ET BIOPHYSICA ACTA: INTERNATIONAL JOURNAL OF BIOCHEMISTRY AND BIOPHYSICS. 2009;1793(10):1588-1596
- Article: MOLECULAR CELL. 2009;34(4):510-518
- Article: MOLECULAR AND CELLULAR BIOLOGY. 2009;29(8):2230-2242
- Article: JOURNAL OF BIOLOGICAL CHEMISTRY. 2008;283(5):2814-2821
- Article: ENDOCRINOLOGY. 2008;149(1):339-345
- Article: ENDOCRINOLOGY. 2007;148(10):4875-4886
- Article: ENDOCRINOLOGY. 2007;148(7):3196-3204
- Article: BIOCHIMICA ET BIOPHYSICA ACTA: INTERNATIONAL JOURNAL OF BIOCHEMISTRY AND BIOPHYSICS. 2007;1773(6):687-690
- Article: JOURNAL OF BIOLOGICAL CHEMISTRY. 2007;282(10):7482-7490
- Article: BIOCHEMICAL PHARMACOLOGY. 2005;69(12):1765-1772
- Article: JOURNAL OF BIOLOGICAL CHEMISTRY. 2004;279(52):54510-54517
- Article: JOURNAL OF BIOLOGICAL CHEMISTRY. 2004;279(37):38721-38729
- Article: FREE RADICAL BIOLOGY AND MEDICINE. 2004;36(10):1270-1278
- Article: JOURNAL OF BIOLOGICAL CHEMISTRY. 2003;278(15):13133-13142
- Article: JOURNAL OF BIOLOGICAL CHEMISTRY. 2003;278(4):2141-2146
- Article: JOURNAL OF BIOLOGICAL CHEMISTRY. 2003;278(2):1059-1066
- Article: JOURNAL OF BIOLOGICAL CHEMISTRY. 2002;277(36):33249-33257
- Article: GENES TO CELLS. 2001;6(12):1077-1090
- Article: JOURNAL OF BIOLOGICAL CHEMISTRY. 2001;276(34):31567-31574
- Article: MECHANISMS OF DEVELOPMENT. 2000;97(1-2):13-26
- Article: EUROPEAN JOURNAL OF NEUROSCIENCE. 2000;12(5):1669-1678
- Article: BIOCHIMICA ET BIOPHYSICA ACTA: INTERNATIONAL JOURNAL OF BIOCHEMISTRY AND BIOPHYSICS. 1999;1447(1):113-118
- Article: FEBS JOURNAL. 1999;261(2):405-412
- Article: JOURNAL OF BIOLOGICAL CHEMISTRY. 1999;274(1):345-353
- Article: MITOCHONDRIAL DNA. 1999;10(3):179-182
- Article: JOURNAL OF BIOLOGICAL CHEMISTRY. 1997;272(49):30841-30847
- Visa fler
Alla övriga publikationer
- Editorial comment: STEM CELLS. 2023;41(2):105-110
- Letter: STEM CELLS. 2023;41(2):205-206
- Editorial comment: OBSTETRICAL & GYNECOLOGICAL SURVEY. 2020;75(6):354-355
- Thesis / dissertation: 2003
- Published conference paper: BIOFACTORS. 2003;18(1-4):45-50
- Review: ANTIOXIDANTS & REDOX SIGNALING. 2000;2(4):801-810
Anställningar
- Forskningsinfrastrukturspecialist, Medicin, Huddinge, Karolinska Institutet, 2024-
Examina och utbildning
- MEDICINE DOKTORSEXAMEN, Institutionen för biovetenskaper och näringslära, Karolinska Institutet, 2003