Masahito Yoshihara

Publikationer
Populärvetenskap och samverkan

Artiklar

Article: NATURE COMMUNICATIONS. 2024;15(1):9082
The DoGA Consortium expression atlas of promoters and genes in 100 canine tissues
DoGA Consortium
Article: NATURE COMMUNICATIONS. 2024;15(1):5543
Host-derived protein profiles of human neonatal meconium across gestational ages
Shitara Y; Konno R; Yoshihara M; Kashima K; Ito A; Mukai T; Kimoto G; Kakiuchi S; Ishikawa M; Kakihara T; Nagamatsu T; Takahashi N; Fujishiro J; Kawakami E; Ohara O; Kawashima Y; Watanabe E
Article: CORNEA. 2024;43(7):805-811
Comparison of Scheimpflug and Anterior Segment Optical Coherence Tomography Imaging Parameters for Japanese Patients With Fuchs Endothelial Corneal Dystrophy With and Without TCF4 Repeat Expansions
Maeno S; Oie Y; Koto R; Nishida N; Yamashita A; Yoshioka M; Kai C; Soma T; Koh S; Yoshihara M; Kawasaki R; Jhanji V; Nakamori M; Tsujikawa M; Nishida K
Article: BMC BIOLOGY. 2024;22(1):48
Primary cilia promote the differentiation of human neurons through the WNT signaling pathway
Coschiera A; Yoshihara M; Lauter G; Ezer S; Pucci M; Li H; Kavsek A; Riedel CG; Kere J; Swoboda P
Article: GENOME MEDICINE. 2023;15(1):73
Identification of novel genetic risk factors of dilated cardiomyopathy: from canine to human
Niskanen JE; Ohlsson A; Ljungvall I; Droegemueller M; Ernst RF; Dooijes D; van Deutekom HWM; van Tintelen JP; Blok CJBS; van Vugt M; van Setten J; Asselbergs FW; Petric AD; Salonen M; Hundi S; Hoertenhuber M; Kere J; Pyle WG; Donner J; Postma AV; Leeb T; Andersson G; Hytonen MK; Haggstrom J; Wiberg M; Friederich J; Eberhard J; Harakalova M; van Steenbeek FG; Wess G; Lohi H
Article: STEM CELL REPORTS. 2023;18(8):1621-1628
Transcriptomic differences between human 8-cell-like cells reprogrammed with different methods
Yoshihara M; Kere J
Article: CANCER COMMUNICATIONS. 2023;43(6):637-660
Perivascular localized cells commit erythropoiesis in PDGF-B-expressing solid tumors
Hosaka K; Wang C; Zhang S; Lv X; Seki T; Zhang Y; Jing X; Wu J; Du Q; He X; Fan Y; Li X; Kondo M; Yoshihara M; Qian H; Shi L; Zhu P; Xu Y; Yang Y; Cheng T; Cao Y
Article: ISCIENCE. 2023;26(3):106172
Comprehensive characterization of the embryonic factor LEUTX
Gawriyski L; Jouhilahti E-M; Yoshihara M; Fei L; Weltner J; Airenne TT; Trokovic R; Bhagat S; Tervaniemi MH; Murakawa Y; Salokas K; Liu X; Miettinen S; Burglin TR; Sahu B; Otonkoski T; Johnson MS; Katayama S; Varjosalo M; Kere J
Article: NATURE COMMUNICATIONS. 2023;14(1):488
B1 SINE-binding ZFP266 impedes mouse iPSC generation through suppression of chromatin opening mediated by reprogramming factors
Kaemena DF; Yoshihara M; Beniazza M; Ashmore J; Zhao S; Bertenstam M; Olariu V; Katayama S; Okita K; Tomlinson SR; Yusa K; Kaji K
Article: PEDIATRIC DIABETES. 2022;23(6):703-713
Viral infection-related gene upregulation in monocytes in children with signs of β-cell autoimmunity
Valta M; Yoshihara M; Einarsdottir E; Pahkuri S; Ezer S; Katayama S; Knip M; Veijola R; Toppari J; Ilonen J; Kere J; Lempainen J
Article: NATURE. 2022;608(7922):421-428
Brown-fat-mediated tumour suppression by cold-altered global metabolism
Seki T; Yang Y; Sun X; Lim S; Xie S; Guo Z; Xiong W; Kuroda M; Sakaue H; Hosaka K; Jing X; Yoshihara M; Qu L; Li X; Chen Y; Cao Y
Article: STEM CELL REPORTS. 2022;17(7):1743-1756
Transient DUX4 expression in human embryonic stem cells induces blastomere-like expression program that is marked by SLC34A2
Yoshihara M; Kirjanov I; Nykanen S; Sokka J; Weltner J; Lundin K; Gawriyski L; Jouhilahti E-M; Varjosalo M; Tervaniemi MH; Otonkoski T; Trokovic R; Katayama S; Vuoristo S; Kere J
Article: ISCIENCE. 2022;25(4):104137
DUX4 is a multifunctional factor priming human embryonic genome activation
Vuoristo S; Bhagat S; Hyden-Granskog C; Yoshihara M; Gawriyski L; Jouhilahti E-M; Ranga V; Tamirat M; Huhtala M; Kirjanov I; Nykanen S; Krjutskov K; Damdimopoulos A; Weltner J; Hashimoto K; Recher G; Ezer S; Paluoja P; Paloviita P; Takegami Y; Kanemaru A; Lundin K; Airenne TT; Otonkoski T; Tapanainen JS; Kawaji H; Murakawa Y; Burglin TR; Varjosalo M; Johnson MS; Tuuri T; Katayama S; Kere J
Article: STEM CELL REPORTS. 2022;17(2):413-426
CRISPR activation enables high-fidelity reprogramming into human pluripotent stem cells
Sokka J; Yoshihara M; Kvist J; Laiho L; Warren A; Stadelmann C; Jouhilahti E-M; Kilpinen H; Balboa D; Katayama S; Kyttala A; Kere J; Otonkoski T; Weltner J; Trokovic R
Article: OCULAR SURFACE. 2022;23:197-200
High expression of SARS-CoV2 viral entry-related proteins in human limbal stem cells
Sasamoto Y; Lee CAA; Yoshihara M; Martin G; Ksander BR; Frank MH; Frank NY
Article: STAR PROTOCOLS. 2021;2(4):100995
Generation of RNA sequencing libraries for transcriptome analysis of globin-rich tissues of the domestic dog
Ezer S; Yoshihara M; Katayama S; DoGA Consortium C; Daub C; Lohi H; Krjutskov K; Kere J
Article: HUMAN GENETICS. 2021;140(11):1569-1579
A missense variant in IFT122 associated with a canine model of retinitis pigmentosa
Kaukonen M; Pettinen I-T; Wickstrom K; Arumilli M; Donner J; Juhola I-J; Holopainen S; Turunen JA; Yoshihara M; Kere J; Lohi H
Article: NATURE ECOLOGY AND EVOLUTION. 2021;5(10):1415-1423
Dog colour patterns explained by modular promoters of ancient canid origin
Bannasch DL; Kaelin CB; Letko A; Loechel R; Hug P; Jagannathan V; Henkel J; Roosje P; Hytonen MK; Lohi H; Arumilli M; Minor KM; Mickelson JR; Drogemuller C; Barsh GS; Leeb T
Article: NEUROBIOLOGY OF DISEASE. 2021;156:105418
Cystatin B-deficiency triggers ectopic histone H3 tail cleavage during neurogenesis
Daura E; Tegelberg S; Yoshihara M; Jackson C; Simonetti F; Aksentjeff K; Ezer S; Hakala P; Katayama S; Kere J; Lehesjoki A-E; Joensuu T
Article: NATURE COMMUNICATIONS. 2021;12(1):3297
Discovery of widespread transcription initiation at microsatellites predictable by sequence-based deep neural network
Grapotte M; Saraswat M; Bessiere C; Menichelli C; Ramilowski JA; Severin J; Hayashizaki Y; Itoh M; Tagami M; Murata M; Kojima-Ishiyamas M; Noma S; Noguchi S; Kasukawa T; Hasegawa A; Suzuki H; Nishiyori-Sueki H; Frith MC; Chatelain C; Carninci P; de Hoom MJL; Wasserman WW; Brehelin L; Lecellieree C-H
Article: SCIENTIFIC REPORTS. 2021;11(1):9123
Identification of candidate PAX2-regulated genes implicated in human kidney development
Yamamura Y; Furuichi K; Murakawa Y; Hirabayashi S; Yoshihara M; Sako K; Kitajima S; Toyama T; Iwata Y; Sakai N; Hosomichi K; Murphy PM; Tajima A; Okita K; Osafune K; Kaneko S; Wada T
Article: CELLS. 2021;10(2):241
Spermatogonia Loss Correlates with LAMA 1 Expression in Human Prepubertal Testes Stored for Fertility Preservation
Kurek M; Akesson E; Yoshihara M; Oliver E; Cui Y; Becker M; Alves-Lopes JP; Bjarnason R; Romerius P; Sundin M; Noren Nystrom U; Langenskiold C; Vogt H; Henningsohn L; Petersen C; Soder O; Guo J; Mitchell RT; Jahnukainen K; Stukenborg J-B
Article: JOURNAL OF CELL SCIENCE. 2020;133(21):jcs249789
Differentiation of ciliated human midbrain-derived LUHMES neurons
Lauter G; Coschiera A; Yoshihara M; Sugiaman-Trapman D; Ezer S; Sethurathinam S; Katayama S; Kere J; Swoboda P
Article: EBIOMEDICINE. 2020;59:102872
Fetal HLA-G mediated immune tolerance and interferon response in preeclampsia
Wedenoja S; Yoshihara M; Teder H; Sariola H; Gissler M; Katayama S; Wedenoja J; Hakkinen IM; Ezer S; Linder N; Lundin J; Skoog T; Sahlin E; Iwarsson E; Pettersson K; Kajantie E; Mokkonen M; Heinonen S; Laivuori H; Krjutskov K; Kere J
Article: MOLECULAR NEUROBIOLOGY. 2020;57(7):2944-2958
Dyslexia Candidate Gene and Ciliary Gene Expression Dynamics During Human Neuronal Differentiation
Bieder A; Yoshihara M; Katayama S; Krjutskov K; Falk A; Kere J; Tapia-Paez I
Journal article: JOURNAL OF THE ENDOCRINE SOCIETY. 2020;4(Supplement_1):or31-or03
OR31-03 Single-Cell Profiling of Adult Human Ovarian Cortex Reveals Six Main Cell Types but No Germline Stem Cells
Wagner M; Yoshihara M; Douagi I; Damdimopoulos A; Panula S; Petropoulos S; Lu H; Pettersson K; Palm K; Katayama S; Hovatta O; Kere J; Lanner F; Damdimopoulou P
Article: NATURE COMMUNICATIONS. 2020;11(1):1147
Single-cell analysis of human ovarian cortex identifies distinct cell populations but no oogonial stem cells
Wagner M; Yoshihara M; Douagi I; Damdimopoulos A; Panula S; Petropoulos S; Lu H; Pettersson K; Palm K; Katayama S; Hovatta O; Kere J; Lanner F; Damdimopoulou P
Article: PLOS GENETICS. 2020;16(3):e1008659
A putative silencer variant in a spontaneous canine model of retinitis pigmentosa
Kaukonen M; Quintero IB; Mukarram AK; Hytonen MK; Holopainen S; Wickstrom K; Kyostila K; Arumilli M; Jalomaki S; Daub CO; Kere J; Lohi H
Article: JOURNAL OF BIOLOGICAL CHEMISTRY. 2019;294(7):2460-2469
Transcription factor TFAP2B up-regulates human corneal endothelial cell-specific genes during corneal development and maintenance
Hara S; Kawasaki S; Yoshihara M; Winegarner A; Busch C; Tsujikawa M; Nishida K
Article: ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY. 2019;1201:23-47
Genomic Instability of iPSCs and Challenges in Their Clinical Applications
Yoshihara M; Oguchi A; Murakawa Y
Article: JOURNAL OF THORACIC ONCOLOGY. 2018;13(11):1676-1691
An Integrative Analysis of Transcriptome and Epigenome Features of ASCL1-Positive Lung Adenocarcinomas
Miyashita N; Horie M; Suzuki HI; Yoshihara M; Djureinovic D; Persson J; Brunnstrom H; Lindskog C; Elfving H; Micke P; Saito A; Nagase T
Article: EBIOMEDICINE. 2017;25:175-186
Restricted Presence of POU6F2 in Human Corneal Endothelial Cells Uncovered by Extension of the Promoter-level Expression Atlas
Yoshihara M; Hara S; Tsujikawa M; Kawasaki S; Hayashizaki Y; Itoh M; Kawaji H; Nishida K
Article: CELL REPORTS. 2017;21(2):308-315
Hotspots of De Novo Point Mutations in Induced Pluripotent Stem Cells
Yoshihara M; Araki R; Kasama Y; Sunayama M; Abe M; Nishida K; Kawaji H; Hayashizaki Y; Murakawa Y
Article: SCIENTIFIC REPORTS. 2017;7(1):2845
High-resolution promoter map of human limbal epithelial cells cultured with keratinocyte growth factor and rho kinase inhibitor
Yoshihara M; Sasamoto Y; Hayashi R; Ishikawa Y; Tsujikawa M; Hayashizaki Y; Itoh M; Kawaji H; Nishida K
Article: CORNEA. 2015;34(1):54-59
Corneal Topographic Analysis of Patients With Mooren Ulcer Using 3-Dimensional Anterior Segment Optical Coherence Tomography
Yoshihara M; Maeda N; Soma T; Fuchihata M; Hayashi A; Koh S; Oie Y; Nishida K
Article: PLOS ONE. 2015;10(3):e0117581
Discovery of Molecular Markers to Discriminate Corneal Endothelial Cells in the Human Body
Yoshihara M; Ohmiya H; Hara S; Kawasaki S; Hayashizaki Y; Itoh M; Kawaji H; Tsujikawa M; Nishida K
Visa fler

Alla övriga publikationer

Preprint: BIORXIV. 2023
Primary cilia promote the differentiation of human neurons through the WNT signaling pathway
Coschiera A; Yoshihara M; Lauter G; Ezer S; Kere J; Swoboda P
Editorial comment: STEM CELLS. 2023;41(2):105-110
The Continued Absence of Functional Germline Stem Cells in Adult Ovaries
Yoshihara M; Wagner M; Damdimopoulos A; Zhao C; Petropoulos S; Katayama S; Kere J; Lanner F; Damdimopoulou P
Letter: STEM CELLS. 2023;41(2):205-206
Reply: Revisiting Claims of the Continued Absence of Functional Germline Stem Cells in Adult Ovaries
Yoshihara M; Wagner M; Damdimopoulos A; Zhao C; Petropoulos S; Katayama S; Kere J; Lanner F; Damdimopoulou P
Preprint: BIORXIV. 2022
B1 SINE-binding ZFP266 impedes reprogramming through suppression of chromatin opening mediated by pioneering factors
Kaemena DF; Yoshihara M; Ashmore J; Beniazza M; Zhao S; Bertenstam M; Olariu V; Katayama S; Okita K; Tomlinson SR; Yusa K; Kaji K
Book chapter: CURRENT TOPICS IN IPSCS TECHNOLOGY. 2022;p. 147-175
Chapter 7 An update on clinical applications of iPSCs from a genomic point of view
Yoshihara M; Murakawa Y
Preprint: BIORXIV. 2021
Transient DUX4 expression induces blastomere-like expression program that is marked by SLC34A2
Yoshihara M; Kirjanov I; Nykänen S; Sokka J; Weltner J; Lundin K; Gawriyski L; Jouhilahti E-M; Varjosalo M; Tervaniemi M; Otonkoski T; Trokovic R; Katayama S; Vuoristo S; Kere J
Preprint: RESEARCH SQUARE. 2021
A missense Variant in IFT122 Associated with a Canine Model of Retinitis Pigmentosa
Kaukonen M; Pettinen I-T; Wickström K; Arumilli M; Donner J; Juhola I-J; Holopainen S; Turunen J; Yoshihara M; Kere J; Lohi H
Conference publication: INVESTIGATIVE OPHTHALMOLOGY AND VISUAL SCIENCE. 2021;62(8)
Regulation of SARS-CoV2 viral entry-related proteins in human ocular surface epithelium
Sasamoto Y; Lee C; Yoshihara M; Martin G; Ksander B; Frank MH; Frank N
Preprint: BIORXIV. 2020
Ectopic histone clipping in the mouse model of progressive myoclonus epilepsy
Daura E; Tegelberg S; Yoshihara M; Jackson C; Simonetti F; Aksentjeff K; Ezer S; Hakala P; Katayama S; Kere J; Lehesjoki A-E; Joensuu T
Preprint: BIORXIV. 2020
Differentiation of ciliated human midbrain-derived LUHMES neurons
Lauter G; Coschiera A; Yoshihara M; Sugiaman-Trapman D; Ezer S; Sethurathinam S; Katayama S; Kere J; Swoboda P
Editorial comment: OBSTETRICAL AND GYNECOLOGICAL SURVEY. 2020;75(6):354-355
Single-Cell Analysis of Human Ovarian Cortex Identifies Distinct Cell Populations But No Oogonial Stem Cells
Wagner M; Yoshihara M; Douagi I; Damdimopoulos A; Panula S; Petropoulos S; Lu H; Pettersson K; Palm K; Katayama S; Hovatta O; Kere J; Lanner F; Damdimopoulou P
Preprint: BIORXIV. 2019
Balancing Selection atHLA-GModulates Fetal Survival, Preeclampsia and Human Birth Sex Ratio
Wedenoja S; Yoshihara M; Teder H; Sariola H; Gissler M; Katayama S; Wedenoja J; Häkkinen IM; Ezer S; Linder N; Lundin J; Skoog T; Sahlin E; Iwarsson E; Pettersson K; Kajantie E; Mokkonen M; Heinonen S; Laivuori H; Krjutškov K; Kere J
Preprint: BIORXIV. 2019
Single cell map of the human ovarian cortex
Wagner M; Yoshihara M; Douagi I; Damdimopoulos A; Panula S; Petropoulos S; Lu H; Pettersson K; Palm K; Katayama S; Hovatta O; Kere J; Lanner F; Damdimopoulou P
Preprint: BIORXIV. 2019
DUX4 regulates oocyte to embryo transition in human
Vuoristo S; Hydén-Granskog C; Yoshihara M; Bhagat S; Gawriyski L; Jouhilahti E-M; Damdimopoulos A; Ranga V; Tamirat M; Huhtala M; Hashimoto K; Krjutskov K; Recher G; Ezer S; Paluoja P; Paloviita P; Takegami Y; Kanemaru A; Lundin K; Airenne T; Otonkoski T; Tapanainen J; Kawaji H; Murakawa Y; Bürglin T; Varjosalo M; Johnson M; Tuuri T; Katayama S; Kere J
Conference publication: CIRCULATION. 2018;138
CXCL4 is a Predictive Biomarker of Cardiac Differentiation Propensity of Human Induced Pluripotent Stem Cells.
Ohashi F; Miyagawa S; Yasuda S; Miura T; Kuroda T; Yoshida S; Ito E; Yashiro K; Ito M; Kawaji H; Murakawa Y; Yoshihara M; Jun K; Sameshima T; Sawa Y; Sato Y
Review: STEM CELL REVIEWS AND REPORTS. 2017;13(1):7-16
Genomic Instability of iPSCs: Challenges Towards Their Clinical Applications
Yoshihara M; Hayashizaki Y; Murakawa Y
Review: TRENDS IN GENETICS. 2016;32(2):76-88
Enhancec Identification of Transcriptional Enhancers Provides Vechanistic Insights into Diseases
Murakawa Y; Yoshihara M; Kawaji H; Nishikawa M; Zayed H; Suzuki H; Hayashizaki Y
Corrigendum: PLOS ONE. 2015;10(5):e0129412
Discovery of Molecular Markers to Discriminate Corneal Endothelial Cells in the Human Body (vol 10, e0117581, 2015)
Yoshihara M; Ohmiya H; Hara S; Kawasaki S; Hayashizaki Y; Itoh M; Kawaji H; Tsujikawa M; Nishida K

Artiklar

Alla övriga publikationer

Nyheter från KI

Kalenderhändelser från KI