Algoritmisk dynamik - avkoda och omprogrammera livet – Narsis Kianis team

Publikationer

Alla gruppmedlemmars publikationer

• Book chapter: COMPUTATIONAL SCIENCE AND ITS APPLICATIONS – ICCSA 2026: LECTURE NOTES IN COMPUTER SCIENCE. 2027;p. 18-34

  Algorithmic Complexity Underpins When Path Information Improves Graph Neural Networks Performance on Molecular Graphs

  Ibraheem A; Kiani N; Tegner J
• Conference publication: BASIC & CLINICAL PHARMACOLOGY & TOXICOLOGY. 2026;139:36-37

  A VAE-Based Approach to Genetic Heterogeneity Driving Multiple Sclerosis

  Li J; Kiani N; Manouchehrinia A; Olsson T; Kockum I; Shchetynsky K
• Conference publication: BASIC & CLINICAL PHARMACOLOGY & TOXICOLOGY. 2026;139:34

  Temporal Multilayer Clinical Graph for Interpretable MS Risk Trajectory Modelling

  Ebrahimi A; Manouchehrinia A; Moradbeiki P; Wiil UK; Magyari M; Kockum I; Lio P; Kiani N
• Preprint: BIORXIV. 2026

  Single-cell analysis suggests coordinated immune-cell redistribution between blood and cerebrospinal fluid in early multiple sclerosis

  Hallén N; Fernandes SJ; Rad Pour S; Gyllenberg A; Han Y; Ruffin N; Kiani N; Needhamsen M; Piehl F; Kockum I; Al Nimer F; Gomez-Cabrero D; Tegnér J; Jagodic M
• Article: MULTIPLE SCLEROSIS JOURNAL. 2026;32(9):915-926

  A susceptibility network analysis of disease trajectories leading to multiple sclerosis: A nationwide cohort study

  Ebrahimi A; Wiil UK; Olsson T; Lio P; Kockum I; Manouchehrinia A; Kiani NA
• Article: BREAST. 2026;88:104835

  Case-mix-adjusted benchmarking of long-term breast cancer-specific mortality: Insights from a nationwide Swedish registry

  Thurell J; Petrov I; Lindgren P; Bergh J; Fredriksson I; Kiani NA; Hedayati E
• Preprint: MEDRXIV. 2026

  Deep Learning-Based Pretreatment Cardiovascular Risk Stratification in Women with Breast Cancer

  Dehghan Manshadi M; Manouchehri N; Hubbert L; Liljegren A; Manouchehrinia A; Linder-Stragliotto C; Rantala J; Hedayati E; Kiani N
• Preprint: MEDRXIV. 2026

  Cardiovascular Risk in BRCA1/2 Mutation Carriers: A Matched Cohort Study of Breast Cancer Survivors

  Dehghan Manshadi M; Manouchehri N; Hubbert L; Liljegren A; Manouchehrinia A; Linder-Stragliotto C; Rantala J; Hedayati E; A.Kiani N
• Journal article: NPJ COMPLEXITY. 2026

  Assembly theory collapses to dictionary compression and is rendered redundant by common statistical algorithms

  Ozelim L; Uthamacumaran A; Abrahão FS; Hernández-Orozco S; Kiani NA; Tegnér J; Hernández-Quiroz F; Zenil H
• Article: JOURNAL OF CHEMINFORMATICS. 2026;18(1):101

  LEP-AD: language embedding of proteins and attention to drugs predicts drug-target interactions

  Alsulami R; Lehmann R; Daga A; Khan SA; Grunberg R; Abogosh A; Cabrero DG; Arold ST; Hoehndorf R; Tegner J; Kiani NA
• Article: BREAST CANCER RESEARCH AND TREATMENT. 2026;217(2):14

  External validation of PREDICT Breast v3.1 for overall survival in international cohorts, including young and invasive lobular subgroups

  Verheul EM; Doornkamp F; Petrov I; Siesling S; Lingsma HF; Koppert LB; Vreven LWA; Voogd AC; Karsten MM; Doppelbauer L; Gebert P; Kiani N; Borstnar S; Pharoah PDP; Hedayati E; Steyerberg EW; van Klaveren D
• Preprint: ARXIV. 2026

  Epigenetic feedback reshapes dynamical landscapes in gene regulatory networks

  Hauck SH; Saha S; Kiani NA; Tegner JN
• Article: NATURE MACHINE INTELLIGENCE. 2026;8(3):461-473

  Predicting and interpreting cell-type-specific drug responses in the small-data regime using inductive priors

  Alsulami R; Lehmann R; Khan SA; Lagani V; Maillo A; Gomez-Cabrero D; Kiani NA; Tegner J
• Preprint: BIORXIV. 2026

  A distal CTCF-binding site drives MYC expression plasticity in a negative feed-forward loop

  Gao C; Martino M; Chaurasiya A; Casagrande FB; Lim JP; van Ekelenburg YS; Feng W; Liu Y; Scholz B; Mishra P; Thippana M; Torkornoo D; Chau PK; Khan R; Tannaes TM; Tzelepis I; Chacoua I; Geyer N; Meltzer S; Ree AH; Gerling M; Hartman J; Kiani N; Ohlsson R; Göndör A
• Preprint: MEDRXIV. 2026

  A susceptibility network analysis of disease trajectories leading to multiple sclerosis: a nationwide cohort study

  Ebrahimi A; Wiil UK; Olsson T; Lio P; Kockum I; Manouchehrinia A; Kiani N
• Conference publication: ZEITSCHRIFT FUR GASTROENTEROLOGIE. 2026;64(01):e7-e8

  Drug repurposing in acute-on-chronic liver failure – standardized animal models and preclinical evaluation

  Uschner FE; Costa RF; Aguilar F; Kraus N; Schachteli F; Schierwagen R; Gu W; Brol MJ; Stankovic-Valentin N; Deledicque S; Ferreira S; Jeanne SS; Lotersztajn S; Cabrero DG; Kiani NA; Caraceni P; Moreau R; Rautou P-E; Clària J; Trebicka J; Klein S
• Article: AVICENNA JOURNAL OF PHYTOMEDICINE. 2026;16(1):184-194

  The effect of training and Tribulus terrestris extract on the antioxidant system and telomere functional markers in the liver tissue of rats exposed to stanozolol.

  Kiani N; Keshavarz S; Hosseini SA; Banai J
• Article: NATURE COMMUNICATIONS. 2025;16(1):11495

  Leveraging network motifs to improve artificial neural networks

  Zhang H; Yang C-HH; Zenil H; Chen P-Y; Shen Y; Kiani NA; Tegner JN
• Article: INFORMATION SCIENCES. 2025;720:122520

  Minimal algorithmic information loss methods for dimension reduction, feature selection and network sparsification

  Zenil H; Kiani NA; Adams A; Abrahao FS; Rueda-Toicen A; Zea AA; Ozelim L; Tegner J
• Preprint: ARXIV. 2025

  Assembly Theory Reduced to Shannon Entropy and Rendered Redundant by Naive Statistical Algorithms

  Ozelim L; Uthamacumaran A; Abrahão FS; Hernández-Orozco S; Kiani NA; Tegnér J; Zenil H
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Finansiering

Medarbetare och kontakt

Gruppledare

• 

  Narsis Aftab Kiani

  Senior Forskningsspecialist

  E-postadress narsis.kiani@ki.se

Alla medarbetare i gruppen

• 

  Mehdi Dehghan Manshadi

  Postdoktor

  E-postadress mehdi.dehghan.manshadi@ki.se
• Sneha Karthikeyan

  Anknuten till Forskning

  E-postadress sneha.karthikeyan@ki.se
• Narges Manouchehri

  Postdoktorala Studier

  E-postadress narges.manouchehri@ki.se