Algoritmisk dynamik - avkoda och omprogrammera livet – Narsis Kianis team

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Alla gruppmedlemmars publikationer

Book chapter: COMPUTATIONAL SCIENCE AND ITS APPLICATIONS – ICCSA 2026: LECTURE NOTES IN COMPUTER SCIENCE. 2027;p. 18-34
Algorithmic Complexity Underpins When Path Information Improves Graph Neural Networks Performance on Molecular Graphs
Ibraheem A; Kiani N; Tegner J
Preprint: BIORXIV. 2026
Single-cell analysis suggests coordinated immune-cell redistribution between blood and cerebrospinal fluid in early multiple sclerosis
Hallén N; Fernandes SJ; Pour SR; Gyllenberg A; Han Y; Ruffin N; Kiani N; Needhamsen M; Piehl F; Kockum I; Al Nimer F; Gomez-Cabrero D; Tegnér J; Jagodic M
Article: MULTIPLE SCLEROSIS JOURNAL. 2026;32(9):915-926
A susceptibility network analysis of disease trajectories leading to multiple sclerosis: A nationwide cohort study
Ebrahimi A; Wiil UK; Olsson T; Lio P; Kockum I; Manouchehrinia A; Kiani NA
Article: BREAST. 2026;88:104835
Case-mix-adjusted benchmarking of long-term breast cancer-specific mortality: Insights from a nationwide Swedish registry
Thurell J; Petrov I; Lindgren P; Bergh J; Fredriksson I; Kiani NA; Hedayati E
Preprint: MEDRXIV. 2026
Deep Learning-Based Pretreatment Cardiovascular Risk Stratification in Women with Breast Cancer
Dehghan Manshadi M; Manouchehri N; Hubbert L; Liljegren A; Manouchehrinia A; Linder-Stragliotto C; Rantala J; Hedayati E; Kiani N
Preprint: MEDRXIV. 2026
Cardiovascular Risk in BRCA1/2 Mutation Carriers: A Matched Cohort Study of Breast Cancer Survivors
Dehghan Manshadi M; Manouchehri N; Hubbert L; Liljegren A; Manouchehrinia A; Linder-Stragliotto C; Rantala J; Hedayati E; A.Kiani N
Journal article: NPJ COMPLEXITY. 2026
Assembly theory collapses to dictionary compression and is rendered redundant by common statistical algorithms
Ozelim L; Uthamacumaran A; Abrahão FS; Hernández-Orozco S; Kiani NA; Tegnér J; Hernández-Quiroz F; Zenil H
Article: JOURNAL OF CHEMINFORMATICS. 2026;18(1):101
LEP-AD: language embedding of proteins and attention to drugs predicts drug-target interactions
Alsulami R; Lehmann R; Daga A; Khan SA; Grunberg R; Abogosh A; Cabrero DG; Arold ST; Hoehndorf R; Tegner J; Kiani NA
Article: BREAST CANCER RESEARCH AND TREATMENT. 2026;217(2):14
External validation of PREDICT Breast v3.1 for overall survival in international cohorts, including young and invasive lobular subgroups
Verheul EM; Doornkamp F; Petrov I; Siesling S; Lingsma HF; Koppert LB; Vreven LWA; Voogd AC; Karsten MM; Doppelbauer L; Gebert P; Kiani N; Borstnar S; Pharoah PDP; Hedayati E; Steyerberg EW; van Klaveren D
Preprint: ARXIV. 2026
Epigenetic feedback reshapes dynamical landscapes in gene regulatory networks
Hauck SH; Saha S; Kiani NA; Tegner JN
Article: NATURE MACHINE INTELLIGENCE. 2026;8(3):461-473
Predicting and interpreting cell-type-specific drug responses in the small-data regime using inductive priors
Alsulami R; Lehmann R; Khan SA; Lagani V; Maillo A; Gomez-Cabrero D; Kiani NA; Tegner J
Preprint: BIORXIV. 2026
A distal CTCF-binding site drives MYC expression plasticity in a negative feed-forward loop
Gao C; Martino M; Chaurasiya A; Casagrande FB; Lim JP; van Ekelenburg YS; Feng W; Liu Y; Scholz B; Mishra P; Thippana M; Torkornoo D; Chau PK; Khan R; Tannaes TM; Tzelepis I; Chacoua I; Geyer N; Meltzer S; Ree AH; Gerling M; Hartman J; Kiani N; Ohlsson R; Göndör A
Preprint: MEDRXIV. 2026
A susceptibility network analysis of disease trajectories leading to multiple sclerosis: a nationwide cohort study
Ebrahimi A; Wiil UK; Olsson T; Lio P; Kockum I; Manouchehrinia A; Kiani N
Conference publication: ZEITSCHRIFT FUR GASTROENTEROLOGIE. 2026;64(01):e7-e8
Drug repurposing in acute-on-chronic liver failure – standardized animal models and preclinical evaluation
Uschner FE; Costa RF; Aguilar F; Kraus N; Schachteli F; Schierwagen R; Gu W; Brol MJ; Stankovic-Valentin N; Deledicque S; Ferreira S; Jeanne SS; Lotersztajn S; Cabrero DG; Kiani NA; Caraceni P; Moreau R; Rautou P-E; Clària J; Trebicka J; Klein S
Article: AVICENNA JOURNAL OF PHYTOMEDICINE. 2026;16(1):184-194
The effect of training and Tribulus terrestris extract on the antioxidant system and telomere functional markers in the liver tissue of rats exposed to stanozolol.
Kiani N; Keshavarz S; Hosseini SA; Banai J
Article: NATURE COMMUNICATIONS. 2025;16(1):11495
Leveraging network motifs to improve artificial neural networks
Zhang H; Yang C-HH; Zenil H; Chen P-Y; Shen Y; Kiani NA; Tegner JN
Article: INFORMATION SCIENCES. 2025;720:122520
Minimal algorithmic information loss methods for dimension reduction, feature selection and network sparsification
Zenil H; Kiani NA; Adams A; Abrahao FS; Rueda-Toicen A; Zea AA; Ozelim L; Tegner J
Preprint: ARXIV. 2025
Assembly Theory Reduced to Shannon Entropy and Rendered Redundant by Naive Statistical Algorithms
Ozelim L; Uthamacumaran A; Abrahão FS; Hernández-Orozco S; Kiani NA; Tegnér J; Zenil H
Article: CARDIO-ONCOLOGY. 2025;11(1):92
Timing and combinations of cardiovascular diseases in survivors of childhood, adolescent, and young adulthood cancer
Sodling J; Hytting J; Mallios P; Bollano E; Johansson M; Rodriguez-Wallberg KA; Hedayati E; Karlstrom P; Sundbom P; Kiani N; Keskisarkka R; Singull M; Hubbert L
Article: SCIENCE ADVANCES. 2025;11(41):eadw3110
Uncovering the regulatory landscape of early human B cell lymphopoiesis and its implications in the pathogenesis of B-ALL
Planell N; Martinez-de-Morentin X; Mouzo D; Lara-Astiaso D; Vilas-Zornoza A; Martin-Uriz PS; Alignani D; Paiva B; Maillo A; Kurowska A; Berastegui N; Garcia-Olloqui P; Urdangarin A; Noori P; Ortega-Legarreta A; Hernaez M; Lagani V; Kiani N; Merkenschlager M; Ezponda T; Martin-Subero JI; Ramirez RN; Tegner J; Prosper F; Gomez-Cabrero D
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Algoritmisk dynamik - avkoda och omprogrammera livet – Narsis Kianis team

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