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Discrimination of pancreatic cancer and pancreatitis by LC-MS metabolomics
Lindahl A, Heuchel R, Forshed J, Lehtiö J, Löhr M, Nordström A
Metabolomics : Official journal of the Metabolomic Society 2017;13(5):61-

Experimental Design in Clinical 'Omics Biomarker Discovery
Forshed J
Journal of proteome research 2017;16(11):3954-3960

Overlap in serum metabolic profiles between non-related diseases: Implications for LC-MS metabolomics biomarker discovery
Lindahl A, Forshed J, Nordström A
Biochemical and biophysical research communications 2016;478(3):1472-7

Proteomics profiling identify CAPS as a potential predictive marker of tamoxifen resistance in estrogen receptor positive breast cancer
Johansson Hj, Sanchez Bc, Forshed J, Stål O, Fohlin H, Lewensohn R, et al
Clinical proteomics 2015;12(1):8-

Discrimination of conventional and organic white cabbage from a long-term field trial study using untargeted LC-MS-based metabolomics
Mie A, Laursen Kh, Åberg Km, Forshed J, Lindahl A, Thorup-kristensen K, et al
Analytical and bioanalytical chemistry 2014;406(12):2885-97

HiRIEF LC-MS enables deep proteome coverage and unbiased proteogenomics
Branca Rm, Orre Lm, Johansson Hj, Granholm V, Huss M, Pérez-bercoff Å, et al
Nature methods 2014;11(1):59-62

Proteome screening of pleural effusions identifies galectin 1 as a diagnostic biomarker and highlights several prognostic biomarkers for malignant mesothelioma
Mundt F, Johansson Hj, Forshed J, Arslan S, Metintas M, Dobra K, et al
Molecular & cellular proteomics : MCP 2014;13(3):701-15

Quantitative accuracy in mass spectrometry based proteomics of complex samples: the impact of labeling and precursor interference
Sandberg A, Branca Rm, Lehtiö J, Forshed J
Journal of proteomics 2014;96():133-44

SpliceVista, a tool for splice variant identification and visualization in shotgun proteomics data
Zhu Y, Hultin-rosenberg L, Forshed J, Branca Rm, Orre Lm, Lehtiö J
Molecular & cellular proteomics : MCP 2014;13(6):1552-62

Defining, comparing, and improving iTRAQ quantification in mass spectrometry proteomics data
Hultin-rosenberg L, Forshed J, Branca Rm, Lehtiö J, Johansson Hj
Molecular & cellular proteomics : MCP 2013;12(7):2021-31

Protein quantification by peptide quality control (PQPQ) of shotgun proteomics data
Forshed J
Methods in molecular biology (Clifton, N.J.) 2013;1023():149-58

Quantitative proteomics profiling of primary lung adenocarcinoma tumors reveals functional perturbations in tumor metabolism
Pernemalm M, De Petris L, Branca Rm, Forshed J, Kanter L, Soria Jc, et al
Journal of proteome research 2013;12(9):3934-43

Retinoic acid receptor alpha is associated with tamoxifen resistance in breast cancer
Johansson Hj, Sanchez Bc, Mundt F, Forshed J, Kovacs A, Panizza E, et al
Nature communications 2013;4():2175-

Tumor Proteomics by Multivariate Analysis on Individual Pathway Data for Characterization of Vulvar Cancer Phenotypes
Sandberg A, Lindell G, Kallstrom Bn, Branca Rm, Danielsson Kg, Dahlberg M, et al
MOLECULAR & CELLULAR PROTEOMICS 2012;11(7):M112.016998-

Enhanced Information Output From Shotgun Proteomics Data by Protein Quantification and Peptide Quality Control (PQPQ)
Forshed J, Johansson Hj, Pernemalm M, Branca Rmm, Sandberg A, Lehtio J
MOLECULAR & CELLULAR PROTEOMICS 2011;10(10):M111.010264-

Herman Wold medal winners 2007-2009
Forshed J, Gottfries J, Josefson M, Eriksson L, Lundstedt T
JOURNAL OF CHEMOMETRICS 2010;24(11-12):635-635

Multivariate meta-analysis of proteomics data from human prostate and colon tumours
Rosenberg Lh, Franzen B, Auer G, Lehtio J, Forshed J
BMC BIOINFORMATICS 2010;:468-

Effects of pyridine exposure upon structural lipid metabolism in Swiss Webster mice
Wheelock Ce, Forshed J, Goto S, Hammock Bd, Newman Jw
CHEMICAL RESEARCH IN TOXICOLOGY 2008;21(3):583-90

Intra- and inter-metabolite correlation spectroscopy of tomato metabolomics data obtained by liquid chromatography-mass spectrometry and nuclear magnetic resonance
Moco S, Forshed J, De Vos Rch, Bino Rj, Vervoort J
METABOLOMICS 2008;4(3):202-215

Proteomic data analysis workflow for discovery of candidate biomarker peaks predictive of clinical outcome for patients with acute myeloid leukemia
Forshed J, Pernemalm M, Tan Cs, Lindberg M, Kanter L, Pawitan Y, et al
JOURNAL OF PROTEOME RESEARCH 2008;7(6):2332-41

Enhanced multivariate analysis by correlation scaling and fusion of LC/MS and H-1 NMR data
Forshed J, Stolt R, Idborg H, Jacobsson Sp
CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS 2007;85(2):179-185

Evaluation of different techniques for data fusion of LC/MS and H-1-NMR
Forshed J, Idborg H, Jacobsson Sp
CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS 2007;85(1):102-109

Mass spectrometry profiling of low molecular weight platelet Proteome for the detection of lung cancer specific biomarkers
De Petris L, Pernemalm M, Branden E, Koyi H, Forshed J, Sundelin B, et al
JOURNAL OF THORACIC ONCOLOGY 2007;2(8):S356-S357

Global proteomics in AML: Using SELDI-TOF MS on diagnostic samples to identify spectra and protein biomarkers indicative of prognosis
Stenke L, Pememalm M, Forshed J, Pawitan Y, Lagergren-lindberg M, Kanter L, et al
BLOOD 2006;108(11):187B-187B

Proteomic profiling of blast cells from patients with acute myeloid leukaemia, retrospective study
Pernemalm M, Forshed J, Stenke L, Lewensohn R, Kanter L, Lehtio J
MOLECULAR & CELLULAR PROTEOMICS 2006;5(10):S278-S278

A comparison of methods for alignment of NMR peaks in the context of cluster analysis
Forshed J, Torgrip Rjo, Aberg Km, Karlberg B, Lindberg J, Jacobsson Sp
JOURNAL OF PHARMACEUTICAL AND BIOMEDICAL ANALYSIS 2005;38(5):824-32

Quantification of aldehyde impurities in poloxamer by H-1 NMR spectrometry
Forshed J, Erlandsson B, Jacobsson Sp
ANALYTICA CHIMICA ACTA 2005;552(1-2):160-165

Peak alignment of NMR signals by means of a genetic algorithm
Forshed J, Schuppe-koistinen I, Jacobsson Sp
ANALYTICA CHIMICA ACTA 2003;487(2):189-199

NMR and Bayesian regularized neural network regression for impurity determination of 4-aminophenol
Forshed J, Andersson Fo, Jacobsson Sp
JOURNAL OF PHARMACEUTICAL AND BIOMEDICAL ANALYSIS 2002;29(3):495-505

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