Current activities

Initiated research collaborations

Genome structure, function and dynamics
Sequencer established at KI

  • Prof. Katsuhiko Shirahige, BioNut/CMB/IQB
  • Assoc. Prof. Ryuichiro Nakato, IQB
  • Assoc. Prof. Takashi Sutani, IQB
  • Dr. Toyonori Sakata, BioNut/CMB/IQB
  • Dr. Yuri Nakagawa, BioNut/CMB/IQB
     
  • Prof. Camilla Björkegren, BioNut/CMB
  • Associate Professor Lena Ström
  • Dr. Takaharu Kanno, CMB
  • Assist. Prof. Kristian Jeppsson, BioNut/CMB/IQB
  • Assist. Prof. Laura Baranello, CMB
  • Prof. Karl Ekwall, BioNut
  • Prof. Carsten Daub, BioNut

Single-cell, spatial characterization of cancer and immune cells during immune checkpoint blockade therapy

  • Prof. Taku Okazaki, IQB
  • Assist. Prof. Jean Hausser, CMB

Chromatin structure

  • Prof. Hitoshi Kurumizaka, IQB
  • Assoc. Prof. Herwig Schüler, BioNut

Genome Grammar

  • Prof.  Kenta Nakai, Institute of Medical Science
  • Dr. Simon Elsässer, MBB/Scilife

Cohesin function in Acute Myeloid Leukemia

  • Prof. Utaka Suzuki, Graduate School of Frontier Science
  • Dr. Andreas Lennartsson, BioNut

Courses

Doctoral course in Bioinformatics analysis and visualization of medical genomics data, spring 2023

  • In 2023 the course is offered in hybrid format using digital platforms and a one week on-site module at the University of Tokyo.

Course faculty

Kenta Nakai, Institute of Medical Science, UTokyo

Yutaka Suzuki, Dept. of computational Biology and Medical Sciences, UTokyo

Miho Ohsugi, Graduate School of Art and Science, UTokyo

Lea Mikkola, Turku Bioscience Center

Carsten Daub, Dept. of Biosciences and Nutrition, KI

Katsuhiko Shirahige, Institute for Quantitative Biosciences, UTokyo

Contact persons

Carsten Daub

Katsuhiko Shirahige