Tahmina Akhter

Tahmina Akhter

System Developer
Telephone: +46852487817
Visiting address: Nobels väg 12a, 17165 Solna
Postal address: C8 Medicinsk epidemiologi och biostatistik, C8 Administration IT, 171 77 Stockholm
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About me

  • I am an experienced bioinformatician with a PhD in computational biology, focusing on integrating omics data and statistical models to address complex biological problems. Currently, I work as a System Developer in the Department of Medical Epidemiology and Biostatistics at Karolinska Institutet. My role involves processing and managing large-scale clinical, registry, and health data, implementing advanced statistical models, and automating workflows to streamline research processes.

    My expertise spans data integration, analysis, and visualization using Python, R, SQL, and cloud computing platforms. I specialize in leveraging machine learning and advanced statistical methods to uncover actionable insights from complex datasets. In addition, I have significant experience with bioinformatics tools, genome browsers, and omics datasets, contributing to my ability to handle interdisciplinary research challenges effectively.

    In my doctoral research, I developed a cross-cohort classification framework for asthma, identifying molecular and clinical signatures through enhancer-mediated gene regulation. I continue to build on this expertise by contributing to cutting-edge projects in biostatistics and clinical data analysis.

Articles

  • Article: HELIYON. 2024;10(14):e34386
    Akhter T; Mileti E; Kere MM; Kolmert J; Konradsen JR; Hedlin G; Melen E; Daub CO
  • Journal article: EUROPEAN PHYSICAL JOURNAL-SPECIAL TOPICS. 2020;229(24):3675-4284
    Assmann RW; Weikum MK; Akhter T; Alesini D; Alexandrova AS; Anania MP; Andreev NE; Andriyash I; Artioli M; Aschikhin A; Audet T; Bacci A; Barna IF; Bartocci S; Bayramian A; Beaton A; Beck A; Bellaveglia M; Beluze A; Bernhard A; Biagioni A; Bielawski S; Bisesto FG; Bonatto A; Boulton L; Brandi F; Brinkmann R; Briquez F; Brottier F; Bründermann E; Büscher M; Buonomo B; Bussmann MH; Bussolino G; Campana P; Cantarella S; Cassou K; Chancé A; Chen M; Chiadroni E; Cianchi A; Cioeta F; Clarke JA; Cole JM; Costa G; Couprie M-E; Cowley J; Croia M; Cros B; Crump PA; D’Arcy R; Dattoli G; Del Dotto A; Delerue N; Del Franco M; Delinikolas P; De Nicola S; Dias JM; Di Giovenale D; Diomede M; Di Pasquale E; Di Pirro G; Di Raddo G; Dorda U; Erlandson AC; Ertel K; Esposito A; Falcoz F; Falone A; Fedele R; Ferran Pousa A; Ferrario M; Filippi F; Fils J; Fiore G; Fiorito R; Fonseca RA; Franzini G; Galimberti M; Gallo A; Galvin TC; Ghaith A; Ghigo A; Giove D; Giribono A; Gizzi LA; Grüner FJ; Habib AF; Haefner C; Heinemann T; Helm A; Hidding B; Holzer BJ; Hooker SM; Hosokai T; Hübner M; Ibison M; Incremona S; Irman A; Iungo F; Jafarinia FJ; Jakobsson O; Jaroszynski DA; Jaster-Merz S; Joshi C; Kaluza M; Kando M; Karger OS; Karsch S; Khazanov E; Khikhlukha D; Kirchen M; Kirwan G; Kitégi C; Knetsch A; Kocon D; Koester P; Kononenko OS; Korn G; Kostyukov I; Kruchinin KO; Labate L; Le Blanc C; Lechner C; Lee P; Leemans W; Lehrach A; Li X; Li Y; Libov V; Lifschitz A; Lindstrøm CA; Litvinenko V; Lu W; Lundh O; Maier AR; Malka V; Manahan GG; Mangles SPD; Marcelli A; Marchetti B; Marcouillé O; Marocchino A; Marteau F; Martinez de la Ossa A; Martins JL; Mason PD; Massimo F; Mathieu F; Maynard G; Mazzotta Z; Mironov S; Molodozhentsev AY; Morante S; Mosnier A; Mostacci A; Müller A-S; Murphy CD; Najmudin Z; Nghiem PAP; Nguyen F; Niknejadi P; Nutter A; Osterhoff J; Oumbarek Espinos D; Paillard J-L; Papadopoulos DN; Patrizi B; Pattathil R; Pellegrino L; Petralia A; Petrillo V; Piersanti L; Pocsai MA; Poder K; Pompili R; Pribyl L; Pugacheva D; Reagan BA; Resta-Lopez J; Ricci R; Romeo S; Rossetti Conti M; Rossi AR; Rossmanith R; Rotundo U; Roussel E; Sabbatini L; Santangelo P; Sarri G; Schaper L; Scherkl P; Schramm U; Schroeder CB; Scifo J; Serafini L; Sharma G; Sheng ZM; Shpakov V; Siders CW; Silva LO; Silva T; Simon C; Simon-Boisson C; Sinha U; Sistrunk E; Specka A; Spinka TM; Stecchi A; Stella A; Stellato F; Streeter MJV; Sutherland A; Svystun EN; Symes D; Szwaj C; Tauscher GE; Terzani D; Toci G; Tomassini P; Torres R; Ullmann D; Vaccarezza C; Valléau M; Vannini M; Vannozzi A; Vescovi S; Vieira JM; Villa F; Wahlström C-G; Walczak R; Walker PA; Wang K; Welsch A; Welsch CP; Weng SM; Wiggins SM; Wolfenden J; Xia G; Yabashi M; Zhang H; Zhao Y; Zhu J; Zigler A
  • Journal article: JOURNAL OF PHYSICS: CONFERENCE SERIES. 2019;1350(1):012059
    Weikum MK; Akhter T; Alesini D; Alexandrova AS; Anania MP; Andreev NE; Andriyash IA; Aschikhin A; Assmann RW; Audet T; Bacci A; Barna IF; Beaton A; Beck A; Beluze A; Bernhard A; Bielawski S; Bisesto FG; Brandi F; Brinkmann R; Bruendermann E; Büscher M; Bussmann MH; Bussolino G; Chance A; Chen M; Chiadroni E; Cianchi A; Clarke JA; Cole J; Couprie ME; Croia M; Cros B; Crump PA; Dattoli G; Del Dotto A; Delerue N; De Nicola S; Dias JM; Dorda U; Fedele R; Pousa AF; Ferrario M; Filippi F; Fiore G; Fonseca RA; Galimberti M; Gallo A; Ghaith A; Giove D; Giribono A; Gizzi LA; Grüner FJ; Habib AF; Haefner C; Heinemann T; Hidding B; Holzer BJ; Hooker SM; Hosokai T; Huebner M; Irman A; Jafarinia FJ; Jaroszynski DA; Joshi C; Kaluza M; Kando M; Karger OS; Karsch S; Khazanov E; Khikhlukha D; Knetsch A; Kocon D; Koester P; Kononenko OS; Korn G; Kostyukov I; Kruchinin KO; Labate L; Le Blanc C; Lechner C; Leemans W; Lehrach A; Li X; Libov V; Lifschitz A; Litvinenko V; Lu W; Lundh O; Maier AR; Malka V; Manahan GG; Mangles SPD; Marchetti B; de la Ossa AM; Martins JL; Mason PD; Massimo F; Mathieu F; Maynard G; Mazzotta Z; Molodozhentsev AY; Mostacci A; Mueller A-S; Murphy CD; Najmudin Z; Nghiem PAP; Nguyen F; Niknejadi P; Osterhoff J; Espinos DO; Papadopoulos DN; Patrizi B; Petrillo V; Pocsai MA; Poder K; Pompili R; Pribyl L; Pugacheva D; Rajeev PP; Romeo S; Conti MR; Rossi AR; Rossmanith R; Roussel E; Sahai AA; Sarri G; Schaper L; Scherkl P; Schramm U; Schroeder CB; Scifo J; Serafini L; Sheng ZM; Siders C; Silva LO; Silva T; Simon C; Sinha U; Specka A; Streeter MJV; Svystun EN; Symes D; Szwaj C; Tauscher GE; Terzani D; Thompson N; Toci G; Tomassini P; Torres R; Ullmann D; Vaccarezza C; Vannini M; Vieira JM; Villa F; Wahlstrom C-G; Walczak R; Walker PA; Wang K; Welsch CP; Wiggins SM; Wolfenden J; Xia G; Yabashi M; Zhu J; Zigler A
  • Article: INFLAMMATORY BOWEL DISEASES. 2019;25(2):306-316
    Drobin K; Assadi G; Hong M-G; Andersson E; Fredolini C; Forsstrom B; Reznichenko A; Akhter T; Ek WE; Bonfiglio F; Hansen MB; Sandberg K; Greco D; Repsilber D; Schwenk JM; D'Amato M; Halfvarson J
  • Article: PLOS ONE. 2012;7(12):e50758
    Angeletti D; Albrecht L; Blomqvist K; del Pilar Quintana M; Akhter T; Bachle SM; Sawyer A; Sandalova T; Achour A; Wahlgren M; Moll K

All other publications

  • Doctoral thesis: 2024
    Akhter T
  • Conference publication: AIP CONFERENCE PROCEEDINGS. 2019;2160(1):040012
    Weikum MK; Akhter T; Alesini PD; Alexandrova AS; Anania MP; Andreev NE; Andriyash I; Aschikhin A; Assmann RW; Audet T; Bacci A; Barna IF; Beaton A; Beck A; Beluze A; Bernhard A; Bielawski S; Bisesto FG; Brandi F; Bringer O; Brinkmann R; Bründermann E; Büscher M; Bussmann M; Bussolino GC; Chance A; Chanteloup JC; Chen M; Chiadroni E; Cianchi A; Clarke J; Cole J; Couprie ME; Croia M; Cros B; Crump P; Dattoli G; Delerue N; Delferriere O; Delinikolas P; De Nicola S; Dias J; Dorda U; Fedele R; Pousa AF; Ferrario M; Filippi F; Fils J; Fiore G; Fonseca RA; Galimberti M; Gallo A; Garzella D; Gastinel P; Giove D; Giribono A; Gizzi LA; Grüner FJ; Habib AF; Heinemann T; Hidding B; Holzer BJ; Hooker SM; Hosokai T; Hübner M; Irman A; Jafarinia F; Jaroszynski DA; Jaster-Merz S; Joshi C; Kaluza MC; Kando M; Karger OS; Karsch S; Khazanov E; Khikhlukha D; Knetsch A; Kocon D; Koester P; Kononenko O; Korn G; Kostyukov I; Kruchinin K; Labate L; Lechner C; Leemans WP; Lehrach A; Li FY; Li X; Libov V; Lifschitz A; Litvinenko V; Lu W; Lundh O; Maier AR; Malka V; Manahan GG; Mangles SPD; Marchetti B; Marocchino A; de la Ossa AM; Martins JL; Mason P; Massimo F; Mathieu F; Maynard G; Mazzotta Z; Mehrling TJ; Molodozhentsev AY; Mostacci A; Müller AS; Murphy CD; Najmudin Z; Nghiem PAP; Nguyen F; Niknejadi P; Osterhoff J; Papadopoulos D; Patrizi B; Petrillo V; Pocsai MA; Poder K; Pompili R; Pribyl L; Pugacheva D; Romeo S; Rajeev PP; Conti MR; Rossi AR; Rossmanith R; Roussel E; Sahai AA; Sarri G; Schaper L; Scherkl P; Schramm U; Schroeder CB; Schwindling J; Scifo J; Serafini L; Sheng ZM; Silva LO; Silva T; Simon C; Sinha U; Specka A; Streeter MJV; Svystun EN; Symes D; Szwaj C; Tauscher G; Terzani D; Thompson N; Toci G; Tomassini P; Torres R; Ullmann D; Vaccarezza C; Vannini M; Vieira JM; Villa F; Wahlström C-G; Walczak R; Walker PA; Wang K; Welsch CP; Wolfenden J; Xia G; Yabashi M; Yu L; Zhu J; Zigler A

Employments

  • System Developer, Department of Medical Epidemiology and Biostatistics, Karolinska Institutet, 2024-

Degrees and Education

  • Degree Of Doctor Of Philosophy, Department of Medicine, Huddinge, Karolinska Institutet, 2024

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