Nicholas Tobin
About me
I am a Principal Researcher and Team Leader at Karolinska Institutet, working at the interface of cancer genomics, computational biology and clinical translation. My research focuses on biomarker development and patient stratification in cancer, with a particular emphasis on integrating molecular and clinical data to understand disease progression, treatment response, and long-term outcomes.
I hold a BSc in Biotechnology and a PhD in vascular biology from Dublin City University, and have held postdoctoral positions in Lund, Manchester, and at Karolinska Institutet before establishing my current research team at Karolinska Institutet.
I also contribute to teaching and course development at Karolinska Institutet across undergraduate, postgraduate and doctoral levels, with a focus on integrating computational and translational perspectives into biomedical training.
Local Leadership and commissions of trust
Current
2023 - present: Member: Docent Committee, KI
2021 - present: Member: Onk-Pat Departmental Leadership Board
2018 - present: Member: Onk-Pat Equality Committee, KI
Previous
2021 - 2022: KI Faculty advisory council (Fakultetsrådet - JF Representative)
2019 - 2022: Vice Chair - KI Junior Faculty (JF)
Research
Our research focuses on cancer genomics and computational biology, with an emphasis on biomarker development and patient stratification. We have a particular interest in breast cancer, where our work has explored how molecular features, including gene expression signatures and cell cycle activity, influence disease progression, treatment response, and long-term clinical outcomes.
Our work integrates molecular data with large clinical cohorts to identify clinically relevant biomarkers and assess their prognostic and predictive value. More broadly, we aim to develop biology and AI-driven data-centric approaches that support translational research and improve patient stratification across cancer types.
Research Leadership and commissions of trust
Current
2021 - present: Director - cBioNet (Cancer Bioinformatics Network), Onk-Pat
2020 - present: Member - Pfizer Breast Cancer Translational Research Advisory Board
2013 - present: Executive Board Member - BRECT (Breast Cancer Research Consortium)
Previous
2023 - 2025: Chair, Scientific Committee - Cancer Core Europe Summer School
2019 - 2022: Executive Board Member - Cancer Research KI (JF Representative)
Teaching
I teach primarily in bioinformatics across undergraduate (Bachelor’s), Master’s, and doctoral education at Karolinska Institutet. My teaching focuses on the application of computational methods to better understand cancer biology. In addition, I deliver seminars on key aspects of cancer biology, including the hallmarks of cancer and the clinical utility of gene expression signatures. I also provide training in widely used cancer genomics platforms such as cBioPortal.
I serve as Director of Education (GUA) at the Department of Oncology-Pathology, where I contribute to educational leadership, curriculum development, and strategic planning. I have completed 12 weeks of formal pedagogical training and have extensive experience supervising and examining students at Bachelor’s, Master’s, PhD, and postdoctoral levels.
Education Leadership and commissions of trust
Current
2024 - present: Board Member - Education Advisory Board, Gustave Roussy, Paris
2024 - present: Board Member - Education and Training Pillar, Cancer Core Europe
2021 - present: Director of Education (GUA) - Onk-Pat, KI
2020 - present: Board Member FoTO (PhD Programme, Tumour Biology and Oncology), KI
Previous
2020 - 2024: Course Director, Molecular Medicine-Oncology (Biomedicine Programme), KI
Selected publications
- Journal article: BMC MEDICINE. 2026;24(1):424Camargo-Romera P; Castresana-Aguirre M; Danielsson O; Dar H; Ostman A; Czene K; Lindstrom LS; Tobin NP
- Article: BREAST CANCER RESEARCH. 2025;28(1):19Computational decoding of cell-cycle phase effects on cancer hallmarks across breast cancer subtypesCastresana-Aguirre M; Matikas A; Lindstrom LS; Tobin NP
- Article: BREAST CANCER RESEARCH. 2024;26(1):38Castresana-Aguirre M; Johansson A; Matikas A; Foukakis T; Lindstroem LS; Tobin NP
- Article: NPJ PRECISION ONCOLOGY. 2022;6(1):59Lundberg A; Yi JJJ; Lindstrom LS; Tobin NP
- Article: ONCOGENE. 2020;39(32):5430-5440Lundberg A; Lindstrom LS; Parker JS; Loverli E; Perou CM; Bergh J; Tobin NP
- Article: BREAST CANCER RESEARCH. 2019;21(1):34Lundberg A; Lindstroem LS; Li J; Harrell JC; Darai-Ramqvist E; Sifakis EG; Foukakis T; Perou CM; Czene K; Bergh J; Tobin NP
- Article: CLINICAL CANCER RESEARCH. 2017;23(24):7512-7520Lundberg A; Lindstrom LS; Harrell JC; Falato C; Carlson JW; Wright PK; Foukakis T; Perou CM; Czene K; Bergh J; Tobin NP
- Article: CLINICAL CANCER RESEARCH. 2017;23(23):7225-7231Tobin NP; Lundberg A; Lindstrom LS; Harrell JC; Foukakis T; Carlsson L; Einbeigi Z; Linderholm BK; Loman N; Malmberg M; Ferno M; Czene K; Perou CM; Bergh J; Hatschek T
- Article: CLINICAL CANCER RESEARCH. 2016;22(10):2417-2426Tobin NP; Wennmalm K; Lindstrom LS; Foukakis T; He L; Genove G; Ostman A; Landberg G; Betsholtz C; Bergh J
- Article: ANNALS OF ONCOLOGY. 2015;26(1):81-88Tobin NP; Harrell JC; Lövrot J; Egyhazi Brage S; Frostvik Stolt M; Carlsson L; Einbeigi Z; Linderholm B; Loman N; Malmberg M; Walz T; Fernö M; Perou CM; Bergh J; Hatschek T; Lindström LS
- Article: BMC CANCER. 2013;13:473Milosevic J; Klinge J; Borg A-L; Foukakis T; Bergh J; Tobin NP
Articles
- Article: JNCI-JOURNAL OF THE NATIONAL CANCER INSTITUTE. 2026;118(7):1248-1256Danielsson O; Dar H; Nordenskjold A; Perez-Tenorio G; Nordenskjold B; Fornander T; Stal O; Tobin NP; Tutzauer J; Johansson A; Lindstrom LS
- Article: INTERNATIONAL JOURNAL OF CANCER. 2026;158(4):1106-1115Danielsson O; Dar H; Perez-Tenorio G; Nordenskjold A; Yau C; Benz CC; Esserman LJ; Nordenskjold B; Stal O; Fornander T; Hartman J; Tobin NP; Johansson A; Lindstrom LS
- Article: ONCOIMMUNOLOGY. 2025;14(1):2481109Tong L; Kremer V; Neo SY; Seitz C; Tobin NP; Seliger B; Harmenberg U; Colon E; Plogell A-HS; Liu LL; Lundqvist A
- Article: JNCI-JOURNAL OF THE NATIONAL CANCER INSTITUTE. 2025;117(5):868-878Johansson A; Dar H; Nordenskjold A; Perez-Tenorio G; Tobin NP; Yau C; Benz CC; Esserman LJ; van 't Veer LJ; Nordenskjold B; Stal O; Fornander T; Lindstrom LS
- Article: CELL COMMUNICATION AND SIGNALING. 2025;23(1):184Zhang Y; Katkhada K; Meng LZ; Zhao B; Tong S; Chaabane W; Kallai A; Tobin NP; Ostman A; Mega A; Ehnman M
- Article: JOURNAL OF EXPERIMENTAL & CLINICAL CANCER RESEARCH. 2024;43(1):107Fonseca P; Cui W; Struyf N; Tong L; Chaurasiya A; Casagrande F; Zhao H; Fernando D; Chen X; Tobin NP; Seashore-Ludlow B; Lundqvist A; Hartman J; Gondor A; Ostling P; Holmgren L
- Article: JOURNAL OF CLINICAL ONCOLOGY. 2022;40(35):4071-4082Johansson A; Dar H; Veer LJVT; Tobin NP; Perez-Tenorio G; Nordenskjold A; Johansson U; Hartman J; Skoog L; Yau C; Benz CC; Esserman LJ; Stal O; Nordenskjold B; Fornander T; Lindstrom LS
- Article: INTERNATIONAL JOURNAL OF CANCER. 2022;150(12):2072-2082Johansson A; Yu NY; Iftimi A; Tobin NP; 't Veer L; Nordenskjold B; Benz CC; Fornander T; Perez-Tenorio G; Stal O; Esserman LJ; Yau C; Lindstrom LS
- Article: PLOS COMPUTATIONAL BIOLOGY. 2022;18(3):e1010020Jeuken GS; Tobin NP; Kall L
- Article: EUROPEAN JOURNAL OF CANCER. 2022;162:194-205Ugalde-Morales E; Grassmann F; Humphreys K; Li J; Eriksson M; Tobin NP; Lindstrom LS; Vallon-Christersson J; Borg A; Hall P; Czene K
- Article: GENETICS IN MEDICINE. 2022;24(1):157-169Yang M; Johnsson P; Brautigam L; Yang XR; Thrane K; Gao J; Tobin NP; Zhou Y; Yu R; Nagy N; Engstrom PG; Tuominen R; Eriksson H; Lundeberg J; Tucker MA; Goldstein AM; Egyhazi-Brage S; Zhao J; Cao Y; Hoiom V
- Article: CELL REPORTS. 2021;36(8):109616Zhang Y; Zhang Y; Kameishi S; Barutello G; Zheng Y; Tobin NP; Nicosia J; Hennig K; Chiu DK-C; Balland M; Barker TH; Cavallo F; Holmgren L
- Article: CANCERS. 2021;13(5):1175Su Y; Tsagkozis P; Papakonstantinou A; Tobin NP; Gultekin O; Malmerfelt A; Ingelshed K; Neo SY; Lundquist J; Chaabane W; Nisancioglu MH; Leiss LW; Ostman A; Bergh J; Sedimbi S; Lehti K; Lundqvist A; Stragliotto CL; Haglund F; Ehnman M
- Article: INTERNATIONAL JOURNAL OF CANCER. 2021;148(4):884-894Ugalde-Morales E; Grassmann F; Humphreys K; Li J; Eriksson M; Tobin NP; Borg A; Vallon-Christersson J; Hall P; Czene K
- Article: MOLECULAR ONCOLOGY. 2020;14(5):951-963Zerdes I; Sifakis EG; Matikas A; Chretien S; Tobin NP; Hartman J; Rassidakis GZ; Bergh J; Foukakis T
- Article: JOURNAL OF CLINICAL INVESTIGATION. 2020;130(3):1185-1198Neo SY; Yang Y; Record J; Ma R; Chen X; Chen Z; Tobin NP; Blake E; Seitz C; Thomas R; Wagner AK; Andersson J; de Boniface J; Bergh J; Murray S; Alici E; Childs R; Johansson M; Westerberg LS; Haglund F; Hartman J; Lundqvist A
- Article: GLIA. 2020;68(2):316-327Mega A; Nilsen MH; Leiss LW; Tobin NP; Miletic H; Sleire L; Strell C; Nelander S; Krona C; Hagerstrand D; Enger PO; Nister M; Ostman A
- Article: CANCERS. 2019;11(10):E1479-1479Zerdes I; Wallerius M; Sifakis EG; Wallmann T; Betts S; Bartish M; Tsesmetzis N; Tobin NP; Coucoravas C; Bergh J; Rassidakis GZ; Rolny C; Foukakis T
- Article: EBIOMEDICINE. 2019;48:212-223Svedlund J; Strell C; Qian X; Zilkens KJC; Tobin NP; Bergh J; Sieuwerts AM; Nilsson M
- Article: JAMA ONCOLOGY. 2019;5(9):1304-1309Yu NY; Iftimi A; Yau C; Tobin NP; van 't Veer L; Hoadley KA; Benz CC; Nordenskjold B; Fornander T; Stal O; Czene K; Esserman LJ; Lindstrom LS
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All other publications
- Preprint: MEDRXIV. 2026Camargo-Romera P; Castresana-Aguirre M; Danielsson O; Dar H; Östman A; Czene K; Lindström LS; Tobin N
- Preprint: BIORXIV. 2025Castresana-Aguirre M; Matikas A; Lindström L; Tobin N
- Poster: ANNALS OF ONCOLOGY. 2024;35:s327Romera PC; Romero MR; Danielsson O; Dar HA; Lindstrom LS; Tobin NP
- Poster: ANNALS OF ONCOLOGY. 2024;35:s346Danielsson O; Dar HA; Nordenskjold A; Tenorio GP; Yau C; Benz C; Van't Veer LJ; Esserman L; Nordenskjold BA; Fornander T; Stal O; Tobin NP; Johansson A; Lindstrom LS
- Poster: ANNALS OF ONCOLOGY. 2024;35:s346Romero MR; Danielsson O; Fornander T; Nordenskjold A; Tenorio GP; Tobin NP; Nordenskjold BA; Stal O; Esserman L; Van't Veer LJ; Lindstrom LS
- Poster: ANNALS OF ONCOLOGY. 2024;35:s340Tutzauer J; De Vos JKJ; Nordenskjold A; Nordenskjold BA; Fornander T; Tenorio GP; Stal O; Tobin NP; Lindstrom LS
- Poster: ANNALS OF ONCOLOGY. 2024;35:s390De Vos JKJ; Tutzauer J; Nordenskjold A; Nordenskjold BA; Fornander T; Tenorio GP; Stal O; Tobin NP; Lindstrom LS
- Letter: CANCER COMMUNICATIONS. 2023;43(7):855-859Tong L; Kremer V; Neo SY; Liu Y; Chen Y; Wagner AK; Yang Y; Chen Z; Seitz C; Tobin NP; Ligtenberg MA; Alici E; Chen X; Haglund F; Seliger B; Harmenberg U; Colon E; Plogell A-HS; Liu LL; Lundqvist A
- Poster: CANCER RESEARCH. 2023;83(5):p6-01-08-p6-01-08Aguirre MC; Johansson A; Lindstrom LS; Tobin N
- Preprint: MEDRXIV. 2023Castresana-Aguirre M; Johansson A; Matikas A; Foukakis T; Lindström L; Tobin N
- Conference publication: CLINICAL CANCER RESEARCH. 2022;28(18)Ehnman M; Katkhada K; Meng LZ; Zhang Y; Zhao B; Tong S; Kallai A; Ostman A; Tobin N
- Poster: CLINICAL CANCER RESEARCH. 2022;28(18_Supplement):a039Ehnman M; Katkhada K; Meng LZ; Zhang Y; Zhao B; Tong S; Kallai A; Östman A; Tobin N
- Preprint: BIORXIV. 2022Lundberg A; Yi JJJ; Lindström L; Tobin N
- Preprint: BIORXIV. 2021Jeuken GS; Tobin NP; Käll L
- Preprint: BIORXIV. 2021Zhang Y; Zhang Y; Kameishi S; Barutello G; Zheng Y; Tobin N; Nicosia J; Hennig K; Chiu DK-C; Balland M; Barker T; Cavallo F; Holmgren L
- Preprint: RESEARCH SQUARE. 2020Johansson A; Yu NY-L; Iftimi A; Tobin NP; Veer LV; Nordenskjöld B; Benz CC; Fornander T; Perez-Tenorio G; Stål O; Esserman L; Yau C; Lindström LS
- Preprint: BIORXIV. 2020Lundberg A; Lindström LS; Parker JS; Löverli E; Perou CM; Bergh J; Tobin NP
- Poster: JOURNAL OF CLINICAL ONCOLOGY. 2019;37(15):550Zerdes I; Sifakis EG; Tobin N; Bergh JCS; Matikas A; Foukakis T
- Poster: CANCER RESEARCH. 2019;79(4):p2-08-25-p2-08-25Zerdes I; Sifakis E; Matikas A; Tobin NP; Charlotte R; Rassidakis GZ; Bergh J; Foukakis T
- Conference publication: NEURO-ONCOLOGY. 2018;20:263-264Mega A; Leiss L; Nilsen MH; Tobin N; Sleire L; Strell C; Liu J; Nekhotiaeva N; Eriksson A; Nelander S; Uhrbom L; Krona C; Hagerstrand D; Enger PO; Nister M; Ostman A
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Employments
- Principal Researcher, Department of Oncology-Pathology, Karolinska Institutet, 2022-
- Lecturer, Department of Oncology-Pathology, Karolinska Institutet, 2021-
Degrees and Education
- Docent, Karolinska Institutet, 2018