Mtakai Ngara
Research
Every cell is unique and generates distinct molecular response(s) in disease.
Understanding these perturbations at single cell resolution is critical in
unravelling complex, yet important diseases such as malaria.
In areas of endemic malaria transmission, individuals living in
geographically defined regions often present distinct phenotypes when
infected by the Plasmodium falciparum. I am interested in applying a systems
approach to understanding how immune cells define the three key outcomes of
malaria infection namely: asymptomatic, mild and symptomatic. To this end, we
will adopt single cell RNA-seq and other genome-wide technologies to profile
T lymphocytes derived from a high-resolution longitudinal cohort from Lake
Victoria islands in Kenya. This will provide an opportunity to gain novel
insight(s) into the disease in field transmission context and enhance our
understanding of the main drivers of adaptive response to malaria infection.
Articles
- Article: BMJ PUBLIC HEALTH. 2024;2(2):e001557Ko YK; Kagaya W; Chan CW; Kanamori M; Mbugua SM; Rotich AK; Kanoi BN; Ngara M; Gitaka J; Kaneko A
- Article: TROPICAL MEDICINE AND HEALTH. 2024;52(1):52Omondi P; Musyoka B; Okai T; Kongere J; Kagaya W; Chan CW; Ngara M; Kanoi BN; Kido Y; Gitaka J; Kaneko A
- Article: DRUG METABOLISM AND PHARMACOKINETICS. 2024;57:101029Musyoka K; Chan CW; Rico EMG; Omondi P; Kijogi C; Okai T; Kongere J; Ngara M; Kagaya W; Kanoi BN; Hiratsuka M; Kido Y; Gitaka J; Kaneko A
- Article: DIABETOLOGIA. 2024;67(2):356-370Miskelly MG; Lindqvist A; Piccinin E; Hamilton A; Cowan E; Nergård B-J; Del Giudice R; Ngara M; Cataldo LR; Kryvokhyzha D; Volkov P; Engelking L; Artner I; Lagerstedt JO; Eliasson L; Ahlqvist E; Moschetta A; Hedenbro J; Wierup N
- Article: ISCIENCE. 2023;26(12):108416Lindqvist A; Abels M; Shcherbina L; Ngara M; Kryvokhyzha D; Chriett S; Riva M; Fajul A; Barghouth M; Luan C; Eliasson L; Larsen O; Rosenkilde MM; Zhang E; Renström E; Wierup N
- Article: SCIENTIFIC REPORTS. 2023;13(1):11416Osborne A; Phelan JE; Kaneko A; Kagaya W; Chan C; Ngara M; Kongere J; Kita K; Gitaka J; Campino S; Clark TG
- Article: TRIALS. 2023;24(1):354Kagaya W; Chan CWW; Kongere J; Kanoi BNN; Ngara M; Omondi P; Osborne A; Barbieri L; Kc A; Minakawa N; Gitaka J; Kaneko A
- Article: JOURNAL OF CLINICAL INVESTIGATION. 2023;133(4):e163612Bacos K; Perfilyev A; Karagiannopoulos A; Cowan E; Ofori JK; Bertonnier-Brouty L; Rönn T; Lindqvist A; Luan C; Ruhrmann S; Ngara M; Nilsson Å; Gheibi S; Lyons CL; Lagerstedt JO; Barghouth M; Esguerra JL; Volkov P; Fex M; Mulder H; Wierup N; Krus U; Artner I; Eliasson L; Prasad RB; Cataldo LR; Ling C
- Article: SCIENTIFIC REPORTS. 2021;11(1):19809Osborne A; Manko E; Takeda M; Kaneko A; Kagaya W; Chan C; Ngara M; Kongere J; Kita K; Campino S; Kaneko O; Gitaka J; Clark TG
- Article: EXPERIMENTAL CELL RESEARCH. 2018;371(1):130-138Ngara M; Palmkvist M; Sagasser S; Hjelmqvist D; Bjorklund AK; Wahlgren M; Ankarklev J; Sandberg R
- Article: PLOS ONE. 2016;11(7):e0154102Astakhova L; Ngara M; Babich O; Prosekov A; Asyakina L; Dyshlyuk L; Midtvedt T; Zhou X; Ernberg I; Matskova L
- Article: CANCER CELL. 2014;25(6):794-808Woll PS; Kjallquist U; Chowdhury O; Doolittle H; Wedge DC; Thongjuea S; Erlandsson R; Ngara M; Anderson K; Deng Q; Mead AJ; Stenson L; Giustacchini A; Duarte S; Giannoulatou E; Taylor S; Karimi M; Scharenberg C; Mortera-Blanco T; Macaulay IC; Clark S-A; Dybedal I; Josefsen D; Fenaux P; Hokland P; Holm MS; Cazzola M; Malcovati L; Tauro S; Bowen D; Boultwood J; Pellagatti A; Pimanda JE; Unnikrishnan A; Vyas P; Goehring G; Schlegelberger B; Tobiasson M; Kvalheim G; Constantinescu SN; Nerlov C; Nilsson L; Campbell PJ; Sandberg R; Papaemmanuil E; Hellstrom-Lindberg E; Linnarsson S; Jacobsen SEW
All other publications
- Preprint: MEDRXIV. 2024Ko Y; Kagaya W; Chan C; Kanamori M; Mbugua S; Rotich A; Kanoi B; Ngara M; Gitaka J; Kaneko A
- Preprint: RESEARCH SQUARE. 2023Kagaya W; Chan CW; Kongere J; Kanoi BN; Ngara M; Omondi P; Osborne A; Barbieri L; Kc A; Minakawa N; Gitaka J; Kaneko A
- Review: DIABETOLOGIA. 2022;65(8):1241-1250Ngara M; Wierup N
- Doctoral thesis: 2019Ngara M
- Editorial comment: PLOS COMPUTATIONAL BIOLOGY. 2010;6(2):e1000650Gichora NN; Fatumo SA; Ngara MV; Chelbat N; Ramdayal K; Opap KB; Siwo GH; Adebiyi MO; El Gonnouni A; Zofou D; Maurady AAM; Adebiyi EF; de Villiers EP; Masiga DK; Bizzaro JW; Suravajhala P; Ommeh SC; Hide W
Grants
- Swedish Research Council1 January 2023 - 31 December 2026Despite effective control tools, malaria elimination remains elusive in tropical Africa. In endemic areas many infected individuals are asymptomatic and submicroscopic that go undiagnosed and untreated but still sustain transmission. Interactions among parasites, mosquitos, and humans are key for the control and maintenance of these low-density infection, however yet to understand the mechanisms behind. Naturally acquired immunity through repeated exposure to parasites can suppress parasite density and protect individuals from severe disease, but the mechanism of immunity acquisition in relation to T cell subsets remains unexplored. Parasites indirectly change the blood seeking behavior of mosquitos by inducing volatile compounds from infected humans, but the link with the parasite density is missing. Using a longitudinal cohort in Lake Victoria, Kenya, we aim to (1) characterize asymptomatic and submicroscopic infection together with the risk factors in eco-epidemiological context, (2) compare the transcriptomes of CD8+ T cells at the single cell level to identify factors that mediate disease severity, and (3) identify behavioral modifiers which explain the increased attractiveness of people carrying various density of parasite. With a focus on asymptomatic and submicroscopic infections, this study seeks to understand how residual transmission persists, with potential implications for development of novel tools and strategies for malaria elimination in tropical Africa.
- Swedish Research Council1 January 2021 - 31 December 2023
Employments
- Postdoctoral Researcher, Department of Microbiology, Tumor and Cell Biology, Karolinska Institutet, 2022-2026
Degrees and Education
- Degree Of Doctor Of Philosophy, Department of Cell and Molecular Biology, Karolinska Institutet, 2019