Jan Ellenberg
About me
Jan Ellenberg is distinguished for many contributions to the cell biology and imaging field. The majority of these were made at the European Molecular Biology Laboratory (EMBL) as Senior Scientist and Head of the Cell Biology and Biophysics Unit. Today, Jan Ellenberg is Director of the Swedish national research infrastructure, SciLifeLab. His major research contributions cover several aspects of the cell division cycle and nuclear organization, including systematic analysis of mitosis, nuclear pore complex structure and assembly, as well as chromatin organization and formation and segregation of mitotic and meiotic chromosomes.
His goal has been to obtain structural and functional measures of the required molecular machinery inside cells using quantitative 4D imaging, single molecule spectroscopy, as well as light sheet and super-resolution microscopy, and recently launched Alpha Cell, that aims to use artificial intelligence and spatial and temporal molecular data to create a predictive model for core functions of human cells and tissue.
Research
Jan Ellenberg's research centers on understanding the intricate dynamics of cell division and nuclear organization, particularly within the context of human disease and development. Utilizing advanced microscopy and live-cell imaging techniques, his team investigates the functional and structural changes of chromosomes and the nuclear envelope during mitosis. His work also delves into the development of new imaging technologies and computational models to study cellular processes molecularly at scale and understand their implications in cancer and fertility disorders.
Articles
- Journal article: NATURE STRUCTURAL & MOLECULAR BIOLOGY. 2026Zhang W; Latham AP; Ronchi P; Schnorrenberg S; Heriche J-K; Huang Z; Sue C; Hossain MJ; Morero NR; Pflaumer H; Hantsche-Grininger M; Schwab Y; Sali A; Ellenberg J
- Journal article: NATURE AGING. 2026;6(8):1592-1610Palikyras S; Varamogiani-Mamatsi V; Zhu Y; Mizi A; Ramasamy S; Grini JV; Liebermann I; Stavropoulou A; Puig AP; Ogurlu-Tank TS; Kydonakis K; Papadionysiou I; Bartsch D; Kargapolova Y; Morero NR; Sofiadis K; Nikolaou C; Kundel F; Kurian L; Ellenberg J; Oudelaar AM; Barbieri M; Beckwith KS; Papantonis A
- Article: NATURE COMMUNICATIONS. 2025;16(1):6673Beckwith KS; Odegard-Fougner O; Morero NR; Barton C; Schueder F; Tang W; Alexander S; Peters J-M; Jungmann R; Birney E; Ellenberg J
- Article: CELL. 2025;188(10):2656-2669Beckwith KS; Brunner A; Morero NR; Jungmann R; Ellenberg J
- Article: NATURE METHODS. 2025;22(4):672-676Bajcsy P; Bhattiprolu S; Boerner K; Cimini BA; Collinson L; Ellenberg J; Fiolka R; Giger M; Goscinski W; Hartley M; Hotaling N; Horwitz R; Jug F; Kemmer I; Kreshuk A; Lundberg E; Mathur A; Narayan K; Onami S; Plant AL; Prior F; Swedlow JR; Taylor A; Keppler A
- Journal article: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2025;122(11):e2415674122Latham AP; Zhang W; Tempkin JOB; Otsuka S; Ellenberg J; Sali A
- Article: JOURNAL OF CELL BIOLOGY. 2025;224(3):e202405169Brunner A; Morero NR; Zhang W; Hossain MJ; Lampe M; Pflaumer H; Halavatyi A; Peters J-M; Beckwith KS; Ellenberg J
- Journal article: NATURE PROTOCOLS. 2025;20(1):26-66Callegari A; Kueblbeck M; Morero NR; Serrano-Solano B; Ellenberg J
- Journal article: BIORXIV. 2024;:2024.10.28.620625Beckwith KS; Brunner A; Morero NR; Jungmann R; Ellenberg J
- Journal article: MOLECULAR CELL. 2024;84(17):3254-3270.e9Hernandez-Armendariz A; Sorichetti V; Hayashi Y; Koskova Z; Brunner A; Ellenberg J; Saric A; Cuylen-Haering S
- Journal article: BIORXIV. 2024;:2024.08.06.606842Latham AP; Tempkin JOB; Otsuka S; Zhang W; Ellenberg J; Sali A
- Journal article: JOURNAL OF MICROSCOPY. 2024;294(3):397-410Wright GD; Thompson KA; Reis Y; Bischof J; Hockberger PE; Itano MS; Yen L; Adelodun ST; Bialy N; Brown CM; Chaabane L; Chew T-L; Chitty AI; Cordelieres FP; De Niz M; Ellenberg J; Engelbrecht L; Fabian-Morales E; Fazeli E; Fernandez-Rodriguez J; Ferrando-May E; Fletcher G; Galloway GJ; Guerrero A; Guimaraes JM; Jacobs CA; Jayasinghe S; Kable E; Kitten GT; Komoto S; Ma X; Marques JA; Millis BA; Miranda K; JohnO'Toole P; Olatunji SY; Paina F; Pollak CN; Prats C; Pylvanainen JW; Rahmoon MA; Reiche MA; Riches JD; Rossi AH; Salamero J; Thiriet C; Terjung S; Vasconcelos ADS; Keppler A
- Journal article: BIORXIV. 2024;:2024.05.29.596439Brunner A; Morero NR; Zhang W; Hossain MJ; Lampe M; Pflaumer H; Halavatyi A; Peters J-M; Beckwith KS; Ellenberg J
- Journal article: NATURE METHODS. 2024;21(5):922Yang F; Bevilacqua C; Hambura S; Neves A; Gopalan A; Watanabe K; Govendir M; Bernabeu M; Ellenberg J; Diz-Munoz A; Koehler S; Rapti G; Jechlinger M; Prevedel R
- Journal article: NATURE METHODS. 2023;20(12):1900-1908Fung HKH; Hayashi Y; Salo VT; Babenko A; Zagoriy I; Brunner A; Ellenberg J; Muller CW; Cuylen-Haering S; Mahamid J
- Journal article: NATURE METHODS. 2023;20(12):1971-1979Yang F; Bevilacqua C; Hambura S; Neves A; Gopalan A; Watanabe K; Govendir M; Bernabeu M; Ellenberg J; Diz-Munoz A; Koehler S; Rapti G; Jechlinger M; Prevedel R
- Journal article: BIOINFORMATICS. 2023;39(10):btad587Theiss M; Heriche J-K; Russell C; Helekal D; Soppitt A; Ries J; Ellenberg J; Brazma A; Uhlmann V
- Journal article: EMBO JOURNAL. 2023;42(17):e113280Bondarenko V; Nikolaev M; Kromm D; Belousov R; Wolny A; Blotenburg M; Zeller P; Rezakhani S; Hugger J; Uhlmann V; Hufnagel L; Kreshuk A; Ellenberg J; van Oudenaarden A; Erzberger A; Lutolf MP; Hiiragi T
- Journal article: NATURE METHODS. 2023;20(7):973-975Nogare DD; Hartley M; Deschamps J; Ellenberg J; Jug F
- Journal article: NATURE METHODS. 2023;20(5):755-760Bevilacqua C; Gomez JM; Fiuza U-M; Chan CJ; Wang L; Hambura S; Eguren M; Ellenberg J; Diz-Munoz A; Leptin M; Prevedel R
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All other publications
- Preprint: BIORXIV. 2025;BIORXIVZhang W; Latham AP; Ronchi P; Schnorrenberg S; Hériché J-K; Huang Z; Hossain MJ; Morero NR; Pflaumer H; Hantsche-Grininger M; Schwab Y; Sali A; Ellenberg J
- Preprint: BIORXIV. 2023Hernandez-Armendariz A; Sorichetti V; Hayashi Y; Brunner A; Ellenberg J; Šarić A; Cuylen-Haering S
- Preprint: BIORXIV. 2022Fung HKH; Hayashi Y; Salo V; Babenko A; Zagoriy I; Brunner A; Ellenberg J; Müller C; Cuylen-Haering S; Mahamid J
- Preprint: BIORXIV. 2022Yang F; Bevilacqua C; Hambura S; Neves A; Gopalan A; Watanabe K; Govendir M; Bernabeu M; Ellenberg J; Diz-Muñoz A; Köhler S; Rapti G; Jechlinger M; Prevedel R
- Preprint: BIORXIV. 2022Bondarenko V; Nikolaev M; Kromm D; Belousov R; Wolny A; Rezakhani S; Hugger J; Uhlmann V; Hufnagel L; Kreshuk A; Ellenberg J; Erzberger A; Lutolf M; Hiiragi T
- Preprint: BIORXIV. 2022Gwosch K; Balzarotti F; Pape J; Hoess P; Ellenberg J; Ries J; Matti U; Schmidt R; Sahl S; Hell S
- Preprint: BIORXIV. 2022Theiss M; Hériché J-K; Russell C; Helekal D; Soppitt A; Ries J; Ellenberg J; Brazma A; Uhlmann V
- Preprint: BIORXIV. 2022Bevilacqua C; Gomez JM; Fiuza U-M; Chan CJ; Wang L; Hambura S; Eguren M; Ellenberg J; Diz-Muñoz A; Leptin M; Prevedel R
- Preprint: BIORXIV. 2021Kueblbeck M; Callegari A; Serrano-Solano B; Ellenberg J
- Preprint: BIORXIV. 2021Otsuka S; Tempkin J; Zhang W; Politi A; Rybina A; Hossain J; Kueblbeck M; Callegari A; Koch B; Morero NR; Morero NR; Sali A; Ellenberg J
- Preprint: BIORXIV. 2021Beckwith KS; Ødegård-Fougner Ø; Morero NR; Barton C; Schueder F; Tang W; Alexander S; Peters J-M; Jungmann R; Jungmann R; Birney E; Ellenberg J
- Corrigendum: NATURE. 2021;592(7852):E8Rajewsky N; Almouzni G; Gorski SA; Aerts S; Amit I; Bertero MG; Bock C; Bredenoord AL; Cavalli G; Chiocca S; Clevers H; De Strooper B; Eggert A; Ellenberg J; Fernandez XM; Figlerowicz M; Gasser SM; Hubner N; Kjems J; Knoblich JA; Krabbe G; Lichter P; Linnarsson S; Marine J-C; Marioni JC; Marti-Renom MA; Netea MG; Nickel D; Nollmann M; Novak HR; Parkinson H; Piccolo S; Pinheiro I; Pombo A; Popp C; Reik W; Roman-Roman S; Rosenstiel P; Schultze JL; Stegle O; Tanay A; Testa G; Thanos D; Theis FJ; Torres-Padilla M-E; Valencia A; Vallot C; van Oudenaarden A; Vidal M; Voet T
- Preprint: BIORXIV. 2020Sabinina VJ; Hossain J; Hériché J-K; Hoess P; Nijmeijer B; Mosalaganti S; Kueblbeck M; Callegari A; Szymborska A; Beck M; Ries J; Ellenberg J
- Preprint: BIORXIV. 2020Schneider I; de Ruijter-Villani M; Hossain J; Stout T; Ellenberg J
- Preprint: BIORXIV. 2019Gwosch K; Pape J; Balzarotti F; Hoess P; Ellenberg J; Ries J; Hell S
- Preprint: BIORXIV. 2019Farrants H; Tarnawski M; Müller T; Otsuka S; Hiblot J; Koch B; Kueblbeck M; Kräusslich H-G; Ellenberg J; Johnsson K
- Preprint: BIORXIV. 2019Frei M; Hoess P; Lampe M; Nijmeijer B; Kueblbeck M; Ellenberg J; Ries J; Pitsch S; Reymond L; Johnsson K
- Preprint: BIORXIV. 2019Thevathasan JV; Kahnwald M; Cieśliński K; Hoess P; Peneti SK; Reitberger M; Heid D; Kasuba KC; Hoerner SJ; Li Y; Wu Y-L; Mund M; Matti U; Pereira PM; Henriques R; Nijmeijer B; Kueblbeck M; Sabinina VJ; Ellenberg J; Ries J
- Preprint: BIORXIV. 2019Schlichthaerle T; Strauss M; Schueder F; Auer A; Nijmeijer B; Kueblbeck M; Sabinina VJ; Thevathasan J; Ries J; Ellenberg J; Jungmann R
- Preprint: BIORXIV. 2019Holzmann J; Politi A; Nagasaka K; Hantsche-Grininger M; Walther N; Koch B; Fuchs J; Dürnberger G; Tang W; Ladurner R; Stocsits R; Busslinger G; Novak B; Mechtler K; Davidson I; Ellenberg J; Peters J-M
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