Ujjwal Neogi
Senior Lecturer | Docent
E-mail: ujjwal.neogi@ki.se
Visiting address: Alfred Nobels alle 8, 14183 Huddinge
Postal address: H5 Laboratoriemedicin, H5 Klin Mikrobiologi Ujjwal Neogi, 141 52 Huddinge
About me
- I am a molecular and systems virologist with expertise in immunometabolism. In 2018, I founded the Systems Virology lab at Karolinska Institute, establishing a state-of-the-art interdisciplinary research platform that integrates computational biology, engineering, and clinical science. The primary goal of this initiative is to advance our understanding of viral pathogenesis. My lab pioneered in understanding metabolic rewiring in RNA virus infection by using systems biology studies and fingerprinting those using in vitro and in vivo studies. We aim to identify the molecular mechanisms of the natural control, primarily in HIV, and to develop novel functional cure strategies by engineering the metabolic state of the immune cells. We expanded our study to other pathogen including SARS-CoV-2, Crimean–Congo hemorrhagic fever viruses (CCHF), Japanese encephalitis viruses (JEV) and Dengue viruses.
Research
- Employing system analysis of multi-omics technologies, our research group strives to uncover the molecular mechanisms underlying viral adaptation within the host and to pinpoint innovative biomarkers indicative of natural immune control against RNA viruses. Our goal is to identify key components of the immune response essential for natural immune protection and disease severity. This knowledge can be translated into the future development of vaccines and antiviral strategies, particularly against emerging and re-emerging viruses such as human immunodeficiency viruses (HIV), Crimean–Congo hemorrhagic fever (CCHF) viruses, dengue viruses, Zika viruses, and more recently, SARS-CoV-2.
Using a similar high-throughput research methodology, our group also focuses on deciphering the mechanism of inflamm-aging in people living with HIV (PLHIV) who are on successful therapy. The aim is to identify biomarkers that could potentially guide future clinical interventions.
Teaching
- As a teacher, I aim to inspire students by igniting their imagination and quest for the unknown and love to learn something new. When I started my Doctoral education at Karolinska Institute in 2010, I was placed in a hospital (St. John's Medical College and Hospital, SJMCH) in Bangalore, India, to establish a molecular biology lab to support a European Union framework program (EU-FP7) funded clinical trial on mobile phone intervention to improve drug adherence. I continued my passion for teaching and started teaching medical students at Karolinska Institute and SJMCH molecular biological techniques. During this time, I was also part of an African/Asian Regional Capacity Development (ARCADE) project to develop a new research training capacity on social determinants of health (RSDH) in LMICs in Asia. The teaching mode was blended teaching, and I developed a course on HIV epidemiology. In 2015, I participated in the research school for clinicians as a lecturer. This course is at Karolinska Institute and focuses on molecular medicine, cell, and molecular biology for clinically active persons emphasizing translational experimental research. In the first year (2015), I taught upcoming clinicians molecular biology processes in lecture classes. In the second year (2017), I merged theory with practical sessions and observed that the students were more engaged and interested in learning with this approach. I also participated in the Erasmus+ mobility international teacher exchange program at The Escola Superior de Tecnologia da Saúde de Lisboa, Lisbon, Portugal. Since 2015, I have taught biomedical laboratory technology, emerging and re-emerging viral diseases. Finally, I have significant teaching experience supervising doctoral, master's, and high school students since 2014.
Articles
- Journal article: BRAIN, BEHAVIOR, AND IMMUNITY. 2024;123:914-927
- Journal article: ISCIENCE. 2024;27(8):110501
- Article: ALLERGY. EUROPEAN JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY. 2024;79(7):1938-1951
- Article: ISCIENCE. 2024;27(4):109346
- Article: NATURE COMMUNICATIONS. 2024;15(1):2532
- Article: VIRUS RESEARCH. 2024;341:199306
- Article: ALLERGY. EUROPEAN JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY. 2024;79(1):65-79
- Article: AGING CELL. 2023;22(10):e13951
- Article: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2023;120(37):e2304722120
- Article: JMIR RESEARCH PROTOCOLS. 2023;12:e47018
- Article: AIDS. 2023;37(7):1023-1033
- Article: CURRENT HIV/AIDS REPORTS. 2023;20(2):42-50
- Article: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2023;120(12):e2220320120
- Article: ELIFE. 2023;12:e82785
- Article: FRONTIERS IN MICROBIOLOGY. 2023;14:1172340
- Article: GUT MICROBES. 2022;14(1):2073131
- Article: LIFE SCIENCE ALLIANCE. 2022;5(9):e202201405
- Article: CELL SYSTEMS. 2022;13(8):665-681.e4
- Article: COMMUNICATIONS BIOLOGY. 2022;5(1):357
- Article: VIROLOGY. 2022;569:13-28
- Article: JOURNAL OF VIROLOGY. 2022;96(3):e0156821-e01521
- Article: COMMUNICATIONS BIOLOGY. 2022;5(1):27
- Article: HRB OPEN RESEARCH. 2022;5:31
- Article: MICROBIOLOGY SPECTRUM. 2021;9(2):e0054921-e00521
- Article: MICROBIOLOGY SPECTRUM. 2021;9(2):e0047021-e00421
- Article: HUMAN MOLECULAR GENETICS. 2021;30(21):2012-2026
- Article: AGING. 2021;13(19):22732-22751
- Article: JOURNAL OF VIROLOGY. 2021;95(18):e0047921-10.1128/jvi.00421
- Article: ISCIENCE. 2021;24(5):102420
- Article: CELL DEATH DISCOVERY. 2021;7(1):114
- Article: ACS INFECTIOUS DISEASES. 2021;7(5):1104-1115
- Article: BMC INFECTIOUS DISEASES. 2021;21(1):214
- Article: ISCIENCE. 2021;24(2):102111
- Article: AIDS. 2021;35(2):227-234
- Article: FRONTIERS IN IMMUNOLOGY. 2021;12:742736
- Article: FRONTIERS IN MICROBIOLOGY. 2021;12:667718
- Article: FRONTIERS IN IMMUNOLOGY. 2021;12:669347
- Article: FRONTIERS IN IMMUNOLOGY. 2021;12:638144
- Article: MOLECULAR & CELLULAR PROTEOMICS. 2021;20:100159
- Article: AIDS RESEARCH AND HUMAN RETROVIRUSES. 2020;36(12):1024-1032
- Article: EMERGING MICROBES AND INFECTIONS. 2020;9(1):1748-1760
- Article: BIOSENSORS AND BIOELECTRONICS. 2020;166:112442
- Article: PATHOGENS. 2020;9(5):E320-320
- Article: SCIENTIFIC REPORTS. 2020;10(1):2747
- Article: CLINICAL INFECTIOUS DISEASES. 2020;70(4):615-627
- Article: COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL. 2020;18:3734-3744
- Article: FRONTIERS IN MICROBIOLOGY. 2020;11:438
- Article: METABOLITES. 2019;9(10):E210-210
- Article: AIDS. 2019;33(11):1757-1763
- Article: BMC INFECTIOUS DISEASES. 2019;19(1):569
- Article: AIDS RESEARCH AND HUMAN RETROVIRUSES. 2019;35(6):572-576
- Article: JOURNAL OF VIROLOGY. 2019;93(9):e00077-e00019
- Article: LAB ON A CHIP. 2019;19(9):1657-1664
- Article: AIDS. 2019;33(3):588-592
- Article: FRONTIERS IN IMMUNOLOGY. 2019;10:1965
- Article: FRONTIERS IN MICROBIOLOGY. 2019;10:1227
- Article: JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY. 2018;73(10):2721-2728
- Article: SCIENTIFIC REPORTS. 2018;8(1):7556
- Article: JOURNAL OF VIROLOGY. 2018;92(9):e00063-e00018
- Article: SCIENTIFIC REPORTS. 2018;8(1):4709
- Article: AIDS. 2018;32(4):469-476
- Article: SCIENTIFIC REPORTS. 2018;8(1):2363
- Article: MEDICINE (UNITED KINGDOM). 2018;97(5):e9759
- Article: EBIOMEDICINE. 2018;27:40-50
- Article: FRONTIERS IN MICROBIOLOGY. 2018;9:1754
- Article: FRONTIERS IN MICROBIOLOGY. 2018;9:2358
- Article: HIV MEDICINE. 2017;18(9):677-684
- Article: SCIENTIFIC REPORTS. 2017;7(1):6371
- Article: SCIENTIFIC REPORTS. 2017;7(1):6269
- Article: SCIENTIFIC REPORTS. 2017;7(1):666
- Article: PLOS ONE. 2017;12(7):e0180140
- Article: JOURNAL OF MEDICAL VIROLOGY. 2017;89(1):106-111
- Article: JOURNAL OF VIROLOGICAL METHODS. 2016;236:98-104
- Article: AIDS RESEARCH AND HUMAN RETROVIRUSES. 2016;32(5):471-474
- Article: THE LANCET INFECTIOUS DISEASES. 2016;16(5):565-575
- Article: THE LANCET HIV. 2016;3(4):e166-e174
- Article: JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY. 2016;71(2):367-371
- Article: BMJ OPEN. 2016;6(1):e008795
- Article: AIDS RESEARCH AND HUMAN RETROVIRUSES. 2016;32(1):80-84
- Article: AIDS. 2015;29(18):2409-2418
- Article: TROPICAL MEDICINE AND INTERNATIONAL HEALTH. 2015;20(11):1462-1472
- Article: JOURNAL OF THE INTERNATIONAL AIDS SOCIETY. 2015;18(1):20035
- Article: INTERVIROLOGY. 2015;58(1):1-5
- Article: JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY. 2014;69(12):3349-3355
- Article: THE BMJ. 2014;349:g5978
- Article: INDIAN PEDIATRICS. 2014;51(10):801-803
- Article: AIDS. 2014;28(15):2319-2322
- Article: AIDS RESEARCH AND HUMAN RETROVIRUSES. 2014;30(6):586-591
- Article: JOURNAL OF ACQUIRED IMMUNE DEFICIENCY SYNDROMES (1999). 2014;65(4):397-404
- Article: PLOS ONE. 2014;9(9):e107074
- Article: ANTIVIRAL THERAPY. 2014;19(8):813-818
- Article: PLOS ONE. 2014;9(6):e99390
- Article: AIDS RESEARCH AND HUMAN RETROVIRUSES. 2013;29(12):1613-1616
- Article: JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY. 2013;68(9):2003-2006
- Article: PEDIATRIC INFECTIOUS DISEASE JOURNAL. 2013;32(5):e227-e229
- Article: JOURNAL OF THE INTERNATIONAL AIDS SOCIETY. 2013;16(1):18472
- Article: PLOS ONE. 2013;8(1):e55421
- Journal article: JOURNAL OF BIOLOGICAL CHEMISTRY. 2012;287(53):44714-44735
- Article: INTERNATIONAL JOURNAL OF MICROBIOLOGY RESEARCH. 2012;136(6):956-962
- Article: BMC INFECTIOUS DISEASES. 2012;12:317
- Article: AIDS RESEARCH AND HUMAN RETROVIRUSES. 2012;28(9):1152-1156
- Article: JOURNAL OF ACQUIRED IMMUNE DEFICIENCY SYNDROMES (1999). 2012;59(4):347-353
- Article: PLOS ONE. 2012;7(6):e39819
- Article: AIDS RESEARCH AND HUMAN RETROVIRUSES. 2011;27(11):1249-1253
- Article: AIDS. 2011;25(8):1123-1126
- Article: REVISTA DA SOCIEDADE BRASILEIRA DE MEDICINA TROPICAL. 2011;44(3):309-312
- Article: AIDS RESEARCH AND HUMAN RETROVIRUSES. 2010;26(12):1299-1305
- Article: AIDS RESEARCH AND HUMAN RETROVIRUSES. 2010;26(10):1097-1101
- Article: AIDS RESEARCH AND THERAPY. 2010;7:28
- Article: AIDS RESEARCH AND THERAPY. 2010;7:24
- Article: BMC MEDICAL RESEARCH METHODOLOGY. 2010;10:25
- Article: AIDS RESEARCH AND THERAPY. 2009;6:28
- Article: JOURNAL OF GENERAL VIROLOGY. 2009;90(Pt 11):2768-2776
- Article: BIOINFORMATION. 2009;4(3):90-91
- Article: ARCHIVES OF VIROLOGY. 2008;153(10):1961-1966
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All other publications
- Book chapter: ADVANCES IN IMMUNOLOGY. 2024;p. 73-100
- Letter: ALLERGY. EUROPEAN JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY. 2022;77(5):1623-1625
- Review: PHARMACOLOGICAL REPORTS. 2022;74(2):273-296
- Preprint: HRB OPEN RES. 2022
- Review: JOURNAL OF PROTEOME RESEARCH. 2020;19(11):4259-4274
- Letter: JOURNAL OF EPIDEMIOLOGY AND GLOBAL HEALTH. 2020;10(3):192-193
- Corrigendum: SCIENTIFIC REPORTS. 2020;10(1):13607
- Letter: ECLINICALMEDICINE. 2020;23:100430
- Editorial comment: ECLINICALMEDICINE. 2020;18:100251
- Meeting abstract: VIRUS EVOLUTION. 2019;5:S2
- Review: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES. 2018;19(7):E2000-2000
- Corrigendum: SCIENTIFIC REPORTS. 2018;8(1):6262
- Letter: AIDS. 2014;28(17):2635-2636
- Review: VIRUSES. 2014;6(9):3535-3562
- Letter: JOURNAL OF INFECTIOUS DISEASES. 2013;208(5):866-867
- Thesis / dissertation: 2013
- Meeting abstract: RETROVIROLOGY. 2012;9:p151
- Review: INDIAN JOURNAL OF MEDICAL RESEARCH. 2011;134(6):769-778
- Meeting abstract: RETROVIROLOGY. 2009;6:p375
- Published conference paper: INDIAN JOURNAL OF EXPERIMENTAL BIOLOGY. 2009;47(6):424-431
- Review: INDIAN JOURNAL OF BIOCHEMISTRY AND BIOPHYSICS. 2008;45(3):141-148
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Grants
- Swedish Research Council1 January 2023 - 31 December 2026
- Swedish Research Council1 December 2021 - 30 November 2025
- Swedish Research Council1 December 2021 - 30 November 2024
- Swedish Research Council1 January 2021 - 31 December 2023
- Swedish Research Council1 December 2018 - 30 November 2023
- Swedish Research Council1 December 2018 - 30 November 2023
- Swedish Research Council1 January 2018 - 31 December 2021
- Swedish Research Council1 January 2018 - 31 December 2020
- Swedish Research Council1 January 2016 - 31 December 2018
Employments
- Senior Lecturer, Department of Laboratory Medicine, Karolinska Institutet, 2024-
Degrees and Education
- Docent, Karolinska Institutet, 2018
- Degree Of Doctor Of Philosophy, Department of Medicine, Huddinge, Karolinska Institutet, 2013