Soham Gupta
Assistant Senior Lecturer
E-mail: soham.gupta@ki.se
Telephone: +46852483751
Visiting address: Alfred Nobels alle 8, 14183 Huddinge
Postal address: H5 Laboratoriemedicin, H5 Klin Mikrobiologi Ujjwal Neogi, 141 52 Huddinge
Part of:
- Department of Laboratory Medicine
- Division of Clinical Microbiology at Labmed
- The Systems Virology Lab – Ujjwal Neogi
About me
- The focus of my research is to expand our understanding of the interplay
between viruses and host immune system using an integrative approach.
I completed my Ph.D. studies on translational genomics of HIV-1 subtypes
circulating in India (HIV-1CIN) at St. John’s Medical College, Rajiv Gandhi
University of Health Sciences, India, in 2014. Post Ph.D. in 2015 I joined
Prof. Maria Masucci’s group at Department of Cell and Molecular Biology,
Karolinska Institutet as a postdoctoral researcher studying the role of
herpesvirus encoded cysteine protease on evasion of host innate immune
response. In 2019 I was appointed Assistant Professor at Division of
Clinical Microbiology, Department of Laboratory Medicine, Karolinska
Institutet.
Research
- My research is aimed at understanding the mechanism of immune regulation
during viral infections. The focus of my research is on emerging and
re-emerging viruses like Coronaviruses, Zika virus, CCHFV etc. and latent
viruses like herpesviruses and HIV-1 and expand our understanding of the
interplay between these viruses and host immune system using an integrative
approach combining multi-omics with immunology, molecular, cell-biological
and biochemical assays.
Articles
- Article: BIOMEDICINE & PHARMACOTHERAPY. 2025;193:118858Ahlén G; Ambikan A; Mikaeloff F; Rezene S; Yan J; Nikouyan N; Revanna CB; Appelberg S; Mirazimi A; Sällberg M; Neogi U; Gupta S
- Journal article: SCIENTIFIC REPORTS. 2025;15(1):32149Ambikan AT; Cederholm A; Rezene S; Aranda-Guillén M; Nordqvist H; Treutiger CJ; Lira-Junior R; Landegren N; Gupta S
- Article: SCIENTIFIC REPORTS. 2025;15(1):32149Ambikan AT; Cederholm A; Rezene S; Aranda-Guillen M; Nordqvist H; Treutiger CJ; Lira-Junior R; Landegren N; Gupta S
- Article: ADVANCED SCIENCE. 2025;12(16):2416453Mikaeloff F; Gelpi M; Escos A; Wang T; Gupta S; Olofsson A; Akusjarvi SS; Schuster S; Naval P; Sood V; Nikouyan N; Knudsen AD; Vestad B; Hogh J; Hov JR; Benfield T; Troseid M; Pawar V; Rucevic M; Benfeitas R; Vegvari A; O'Mahony L; Savai R; Bjorkstrom NK; Lourda M; de Magalhaes JP; Weiss S; Mardinoglu A; Varshney MK; Karlsson AC; Syed YA; Nielsen SD; Neogi U
- Article: VIRUS RESEARCH. 2024;341:199306Bhatt P; Varma M; Sood V; Ambikan A; Jayaram A; Babu N; Gupta S; Mukhopadhyay C; Neogi U
- Article: GENOME BIOLOGY. 2023;24(1):237Sounart H; Lazar E; Masarapu Y; Wu J; Varkonyi T; Glasz T; Kiss A; Borgstrom E; Hill A; Rezene S; Gupta S; Jurek A; Niesnerova A; Druid H; Bergmann O; Giacomello S
- Article: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2023;120(37):e2304722120Ambikan AT; Elaldi N; Akusjaervi SS; Bagci B; Pektas AN; Hewson R; Bagci G; Arasli M; Appelberg S; Mardinoglu A; Sood V; Vegvari A; Benfeitas R; Gupta S; Cetin I; Mirazimi A; Neogi U
- Article: FRONTIERS IN IMMUNOLOGY. 2022;13:1002823Darweesh M; Younis S; Hajikhezri Z; Ali A; Jin C; Punga T; Gupta S; Essand M; Andersson L; Akusjarvi G
- Article: CELL SYSTEMS. 2022;13(8):665-681.e4Ambikan AT; Yang H; Krishnan S; Akusjarvi SS; Gupta S; Lourda M; Sperk M; Arif M; Zhang C; Nordqvist H; Ponnan SM; Sonnerborg A; Treutiger CJ; O'Mahony L; Mardinoglu A; Benfeitas R; Neogi U
- Article: ELIFE. 2022;11:e76071Neogi U; Elaldi N; Appelberg S; Ambikan A; Kennedy E; Dowall S; Bagci BK; Gupta S; Rodriguez JE; Svensson-Akusjarvi S; Monteil V; Vegvari A; Benfeitas R; Banerjea A; Weber F; Hewson R; Mirazimi A
- Article: COMMUNICATIONS BIOLOGY. 2022;5(1):357Svensson Akusjarvi S; Krishnan S; Jutte BB; Ambikan AT; Gupta S; Rodriguez JE; Vegvari A; Sperk M; Nowak P; Vesterbacka J; Svensson JP; Sonnerborg A; Neogi U
- Article: VIROLOGY. 2022;569:13-28Sarkar L; Oko L; Gupta S; Bubak AN; Das B; Gupta P; Safiriyu AA; Singhal C; Neogi U; Bloom D; Banerjee A; Mahalingam R; Cohrs RJ; Koval M; Shindler KS; Pal D; Nagel M; Das Sarma J
- Article: ISCIENCE. 2022;25(1):103607Akusjarvi SS; Ambikan AT; Krishnan S; Gupta S; Sperk M; Vegvari A; Mikaeloff F; Healy K; Vesterbacka J; Nowak P; Sonnerborg A; Neogi U
- Article: COMMUNICATIONS BIOLOGY. 2022;5(1):27Mikaeloff F; Akusjarvi SS; Ikomey GM; Krishnan S; Sperk M; Gupta S; Magdaleno GDV; Escos A; Lyonga E; Okomo MC; Tagne CT; Babu H; Lorson CL; Vegvari A; Banerjea AC; Kele J; Hanna LE; Singh K; de Magalhaes JP; Benfeitas R; Neogi U
- Article: AUTOPHAGY. 2021;17(11):3461-3474Yla-Anttila P; Gupta S; Masucci MG
- Article: PLOS PATHOGENS. 2021;17(9):e1009954Li J; Nagy N; Liu J; Gupta S; Frisan T; Hennig T; Cameron DP; Baranello L; Masucci MG
- Article: ISCIENCE. 2021;24(5):102420Saccon E; Chen X; Mikaeloff F; Rodriguez JE; Szekely L; Vinhas BS; Krishnan S; Byrareddy SN; Frisan T; Vegvari A; Mirazimi A; Neogi U; Gupta S
- Article: CELL DEATH DISCOVERY. 2021;7(1):114Chen X; Saccon E; Appelberg KS; Mikaeloff F; Rodriguez JE; Vinhas BS; Frisan T; Vegvari A; Mirazimi A; Neogi U; Gupta S
- Article: HELIYON. 2021;7(5):e07134Szekely L; Bozoky B; Bendek M; Ostad M; Lavignasse P; Haag L; Wu J; Jing X; Gupta S; Saccon E; Sonnerberg A; Cao Y; Bjornstedt M; Szakos A
- Article: BMC INFECTIOUS DISEASES. 2021;21(1):214Obasa AE; Ambikan AT; Gupta S; Neogi U; Jacobs GB
- Article: MOLECULAR & CELLULAR PROTEOMICS. 2021;20:100159Krishnan S; Nordqvist H; Ambikan AT; Gupta S; Sperk M; Svensson-Akusjarvi S; Mikaeloff F; Benfeitas R; Saccon E; Ponnan SM; Rodriguez JE; Nikouyan N; Odeh A; Ahlen G; Asghar M; Sallberg M; Vesterbacka J; Nowak P; Vegvari A; Sonnerborg A; Treutiger CJ; Neogi U
- Article: FRONTIERS IN IMMUNOLOGY. 2020;11:437Gupta S; Yla-Anttila P; Sandalova T; Achour A; Masucci MG
- Article: COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL. 2020;18:3734-3744Tiwari R; Mishra AR; Mikaeloff F; Gupta S; Mirazimi A; Byrareddy SN; Neogi U; Nayak D
- Article: EMERGING MICROBES & INFECTIONS. 2020;9(1):1748-1760Appelberg S; Gupta S; Svensson Akusjarvi S; Ambikan AT; Mikaeloff F; Saccon E; Vegvari A; Benfeitas R; Sperk M; Stahlberg M; Krishnan S; Singh K; Penninger JM; Mirazimi A; Neogi U
- Article: PLOS PATHOGENS. 2019;15(11):e1008146Gupta S; Yla-Anttila P; Sandalova T; Sun R; Achour A; Masucci MG
- Article: PLOS PATHOGENS. 2018;14(1):e1006852Gupta S; Yla-Anttila P; Callegari S; Tsai M-H; Delecluse H-J; Masucci MG
- Article: BMJ OPEN. 2016;6(1):e008795Gupta S; Palchaudhuri R; Neogi U; Srinivasa H; Ashorn P; De Costa A; Kallander C; Shet A
- Article: TRANSACTIONS OF THE ROYAL SOCIETY OF TROPICAL MEDICINE AND HYGIENE. 2015;109(12):769-774Harwalkar A; Gupta S; Rao A; Srinivasa H
- Article: INTERVIROLOGY. 2015;58(1):1-5Gupta S; Neogi U; Srinivasa H; Shet A
- Article: BMJ-BRITISH MEDICAL JOURNAL. 2014;349:g5978Shet A; De Costa A; Kumarasamy N; Rodrigues R; Rewari BB; Ashorn P; Eriksson B; Diwan V
- Article: GERMS. 2014;4(3):70-72Vamsimohan A; Gupta S; Muralidharan S
- Article: JOURNAL OF INFECTION AND PUBLIC HEALTH. 2014;7(5):413-419Harwalkar A; Gupta S; Rao A; Srinivasa H
- Article: JAIDS-JOURNAL OF ACQUIRED IMMUNE DEFICIENCY SYNDROMES. 2014;65(4):397-404Gupta S; Neogi U; Srinivasa H; Banerjea AC; Shet A
- Article: INTERNATIONAL JOURNAL OF BIOMATERIALS. 2014;2014:383756-6Nirupama DN; Nainan MT; Ramaswamy R; Muralidharan S; Usha HHL; Sharma R; Gupta S
- Article: ANTIVIRAL THERAPY. 2014;19(8):813-818Neogi U; Gupta S; Palchaudhuri R; Rao SD; Shastri S; Diwan V; Laishram RS; De Costa A; Shet A
- Article: JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY. 2013;68(9):2003-2006Gupta S; Neogi U; Srinivasa H; Shet A
- Article: JOURNAL OF INFECTION AND PUBLIC HEALTH. 2013;6(2):108-114Harwalkar A; Sataraddi J; Gupta S; Yoganand R; Rao A; Srinivasa H
- Journal article: CLINICAL MICROBIOLOGY NEWSLETTER. 2013;35(3):25-26Aruna C; Savio J; Gupta S; Muralidharan S
- Article: INTERNATIONAL JOURNAL OF MICROBIOLOGY RESEARCH. 2012;136(6):956-962Neogi U; Gupta S; Rodridges R; Sahoo PN; Rao SD; Rewari BB; Shastri S; De Costa A; Shet A
- Journal article: CLINICAL MICROBIOLOGY NEWSLETTER. 2012;34(17):141-142Aruna C; Savio J; Gupta S; Muralidharan S
- Article: AIDS RESEARCH AND HUMAN RETROVIRUSES. 2012;28(9):1152-1156Neogi U; Gupta S; Sahoo PN; Shet A; Rao SD; Ranga U; Prasad VR
- Article: PLOS ONE. 2012;7(6):e39819Neogi U; Bontell I; Shet A; De Costa A; Gupta S; Diwan V; Laishram RS; Wanchu A; Ranga U; Banerjea AC; Sonnerborg A
- Article: TROPICAL DOCTOR. 2012;42(1):35-37Mishra B; Rockey SM; Gupta S; Srinivasa H; Muralidharan S
- Article: INDIAN JOURNAL OF PEDIATRICS. 2011;78(12):1495-1497Gupta S; Shamsundar R; Shet A; Chawan R; Srinivasa H
- Article: JOURNAL OF INFECTION AND PUBLIC HEALTH. 2011;4(3):140-144Gupta S; Shenoy VP; Bairy I; Srinivasa H; Mukhopadhyay C
- Article: INDIAN JOURNAL OF PATHOLOGY AND MICROBIOLOGY. 2011;54(3):569-571Gupta S; Agarwal S; Sahoo DR; Muralidharan S
- Article: REVISTA DA SOCIEDADE BRASILEIRA DE MEDICINA TROPICAL. 2011;44(3):309-312Goud R; Gupta S; Neogi U; Agarwal D; Naidu K; Chalannavar R; Subhaschandra G
- Article: NEPHROLOGY. 2011;16(1):63-67Gupta S; Muralidharan S; Gokulnath; Srinivasa H
- Article: TROPICAL MEDICINE & INTERNATIONAL HEALTH. 2011;16(1):74-78Gupta S; Shenoy VP; Mukhopadhyay C; Bairy I; Muralidharan S
- Article: CLINICAL LABORATORY. 2011;57(9-10):767-769Gupta S; Aruna C; Muralidharan S
- Article: INDIAN JOURNAL OF MEDICAL SCIENCES. 2010;64(12):553-556Gupta S; Mishra B; Muralidharan S; Srinivasa H
- Article: AIDS RESEARCH AND HUMAN RETROVIRUSES. 2010;26(10):1097-1101Neogi U; Prarthana BS; Gupta S; D'souza G; De Costa A; Kuttiatt VS; Arumugam K; Shet A
- Article: JORNAL BRASILEIRO DE PNEUMOLOGIA. 2010;36(5):612-616Comparison among three cold staining methods in the primary diagnosis of tuberculosis: a pilot studyGupta S; Shenoy VP; Bairy I; Muralidharan S
- Journal article: ASIAN PACIFIC JOURNAL OF TROPICAL MEDICINE. 2010;3(4):328-329Gupta S; Shenoy VP; Bairy I; Muralidharan S
- Article: SOUTHEAST ASIAN JOURNAL OF TROPICAL MEDICINE AND PUBLIC HEALTH. 2009;40(4):765-769Gupta S; Prasad V; Bairy I; Muralidharan S
- Article: JOURNAL OF INFECTION IN DEVELOPING COUNTRIES. 2009;3(2):83-87Chawla K; Gupta S; Mukhopadhyay C; Rao PS; Bhat SS
- Show more
All other publications
- Preprint: BIORXIV. 2025Ahlén G; Ambikan A; Mikaeloff F; Rezene S; Yan J; Nikouyan N; Revanna CB; Appelberg S; Mirazimi A; Sallberg M; Neogi U; Gupta S
- Editorial: FRONTIERS IN IMMUNOLOGY. 2023;14:1148296Sparrer KMJ; Bergeron E; Gupta S
- Review: JOURNAL OF PROTEOME RESEARCH. 2020;19(11):4259-4274Sperk M; van Domselaar R; Rodriguez JE; Mikaeloff F; Vinhas BS; Saccon E; Sonnerborg A; Singh K; Gupta S; Vegvari A; Neogi U
- Editorial: ECLINICALMEDICINE. 2020;18:100251Gupta S; Neogi U
- Editorial: MICROBIAL CELL. 2018;5(5):259-261Gupta S; Yla-Anttila P; Masucci MG
- Letter: CLINICAL LABORATORY. 2013;59(7-8):929-931Gupta S; Shamsundar R; Shet A; Srinivasa H
- Letter: JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY. 2012;67(5):1293-1295Gupta S; Aruna C; Nagaraj S; Dias M; Muralidharan S
Grants
- Swedish Research Council1 January 2022 - 31 December 2025
Employments
- Assistant Senior Lecturer, Department of Laboratory Medicine, Karolinska Institutet, 2025-
- Assistant Professor, Department of Laboratory Medicine, Karolinska Institutet, 2019-2025