Soham Gupta
Assistant Senior Lecturer | Docent
E-mail: soham.gupta@ki.se
Telephone: +46852483751
Visiting address: Alfred Nobels alle 8, 14183 Huddinge
Postal address: H5 Laboratoriemedicin, H5 Klin Mikrobiologi Ujjwal Neogi, 141 52 Huddinge
Part of:
- Department of Laboratory Medicine
- Division of Clinical Microbiology at Labmed
- The Systems Virology Lab – Ujjwal Neogi
About me
- The focus of my research is to expand our understanding of the interplay
between viruses and host immune system using an integrative approach.
I completed my Ph.D. studies on translational genomics of HIV-1 subtypes
circulating in India (HIV-1CIN) at St. John’s Medical College, Rajiv Gandhi
University of Health Sciences, India, in 2014. Post Ph.D. in 2015 I joined
Prof. Maria Masucci’s group at Department of Cell and Molecular Biology,
Karolinska Institutet as a postdoctoral researcher studying the role of
herpesvirus encoded cysteine protease on evasion of host innate immune
response. In 2019 I was appointed Assistant Professor at Division of
Clinical Microbiology, Department of Laboratory Medicine, Karolinska
Institutet.
Research
- My research is aimed at understanding the mechanism of immune regulation
during viral infections. The focus of my research is on emerging and
re-emerging viruses like Coronaviruses, Zika virus, CCHFV etc. and latent
viruses like herpesviruses and HIV-1 and expand our understanding of the
interplay between these viruses and host immune system using an integrative
approach combining multi-omics with immunology, molecular, cell-biological
and biochemical assays.
Articles
- Article: GENOME MEDICINE. 2026;18(1):74Lira-Junior R; Ambikan AT; Cederholm A; Rezene S; Mikaeloff F; Akusjarvi SS; Yalcinkaya A; Chen X; Sperk M; Aranda-Guillen M; Nordqvist H; Treutiger CJ; Landegren N; Neogi U; Gupta S
- Article: BIOMEDICINE & PHARMACOTHERAPY. 2025;193:118858Ahlén G; Ambikan A; Mikaeloff F; Rezene S; Yan J; Nikouyan N; Revanna CB; Appelberg S; Mirazimi A; Sällberg M; Neogi U; Gupta S
- Article: SCIENTIFIC REPORTS. 2025;15(1):32149Ambikan AT; Cederholm A; Rezene S; Aranda-Guillen M; Nordqvist H; Treutiger CJ; Lira-Junior R; Landegren N; Gupta S
- Journal article: SCIENTIFIC REPORTS. 2025;15(1):32149Ambikan AT; Cederholm A; Rezene S; Aranda-Guillén M; Nordqvist H; Treutiger CJ; Lira-Junior R; Landegren N; Gupta S
- Article: ADVANCED SCIENCE. 2025;12(16):2416453Mikaeloff F; Gelpi M; Escos A; Wang T; Gupta S; Olofsson A; Akusjarvi SS; Schuster S; Naval P; Sood V; Nikouyan N; Knudsen AD; Vestad B; Hogh J; Hov JR; Benfield T; Troseid M; Pawar V; Rucevic M; Benfeitas R; Vegvari A; O'Mahony L; Savai R; Bjorkstrom NK; Lourda M; de Magalhaes JP; Weiss S; Mardinoglu A; Varshney MK; Karlsson AC; Syed YA; Nielsen SD; Neogi U
- Article: VIRUS RESEARCH. 2024;341:199306Bhatt P; Varma M; Sood V; Ambikan A; Jayaram A; Babu N; Gupta S; Mukhopadhyay C; Neogi U
- Article: GENOME BIOLOGY. 2023;24(1):237Sounart H; Lazar E; Masarapu Y; Wu J; Varkonyi T; Glasz T; Kiss A; Borgstrom E; Hill A; Rezene S; Gupta S; Jurek A; Niesnerova A; Druid H; Bergmann O; Giacomello S
- Article: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2023;120(37):e2304722120Ambikan AT; Elaldi N; Akusjaervi SS; Bagci B; Pektas AN; Hewson R; Bagci G; Arasli M; Appelberg S; Mardinoglu A; Sood V; Vegvari A; Benfeitas R; Gupta S; Cetin I; Mirazimi A; Neogi U
- Article: FRONTIERS IN IMMUNOLOGY. 2022;13:1002823Darweesh M; Younis S; Hajikhezri Z; Ali A; Jin C; Punga T; Gupta S; Essand M; Andersson L; Akusjarvi G
- Article: CELL SYSTEMS. 2022;13(8):665-681.e4Ambikan AT; Yang H; Krishnan S; Akusjarvi SS; Gupta S; Lourda M; Sperk M; Arif M; Zhang C; Nordqvist H; Ponnan SM; Sonnerborg A; Treutiger CJ; O'Mahony L; Mardinoglu A; Benfeitas R; Neogi U
- Article: ELIFE. 2022;11:e76071Neogi U; Elaldi N; Appelberg S; Ambikan A; Kennedy E; Dowall S; Bagci BK; Gupta S; Rodriguez JE; Svensson-Akusjarvi S; Monteil V; Vegvari A; Benfeitas R; Banerjea A; Weber F; Hewson R; Mirazimi A
- Article: COMMUNICATIONS BIOLOGY. 2022;5(1):357Svensson Akusjarvi S; Krishnan S; Jutte BB; Ambikan AT; Gupta S; Rodriguez JE; Vegvari A; Sperk M; Nowak P; Vesterbacka J; Svensson JP; Sonnerborg A; Neogi U
- Article: VIROLOGY. 2022;569:13-28Sarkar L; Oko L; Gupta S; Bubak AN; Das B; Gupta P; Safiriyu AA; Singhal C; Neogi U; Bloom D; Banerjee A; Mahalingam R; Cohrs RJ; Koval M; Shindler KS; Pal D; Nagel M; Das Sarma J
- Article: ISCIENCE. 2022;25(1):103607Akusjarvi SS; Ambikan AT; Krishnan S; Gupta S; Sperk M; Vegvari A; Mikaeloff F; Healy K; Vesterbacka J; Nowak P; Sonnerborg A; Neogi U
- Article: COMMUNICATIONS BIOLOGY. 2022;5(1):27Mikaeloff F; Akusjarvi SS; Ikomey GM; Krishnan S; Sperk M; Gupta S; Magdaleno GDV; Escos A; Lyonga E; Okomo MC; Tagne CT; Babu H; Lorson CL; Vegvari A; Banerjea AC; Kele J; Hanna LE; Singh K; de Magalhaes JP; Benfeitas R; Neogi U
- Article: AUTOPHAGY. 2021;17(11):3461-3474Yla-Anttila P; Gupta S; Masucci MG
- Article: PLOS PATHOGENS. 2021;17(9):e1009954Li J; Nagy N; Liu J; Gupta S; Frisan T; Hennig T; Cameron DP; Baranello L; Masucci MG
- Article: ISCIENCE. 2021;24(5):102420Saccon E; Chen X; Mikaeloff F; Rodriguez JE; Szekely L; Vinhas BS; Krishnan S; Byrareddy SN; Frisan T; Vegvari A; Mirazimi A; Neogi U; Gupta S
- Article: CELL DEATH DISCOVERY. 2021;7(1):114Chen X; Saccon E; Appelberg KS; Mikaeloff F; Rodriguez JE; Vinhas BS; Frisan T; Vegvari A; Mirazimi A; Neogi U; Gupta S
- Article: HELIYON. 2021;7(5):e07134Szekely L; Bozoky B; Bendek M; Ostad M; Lavignasse P; Haag L; Wu J; Jing X; Gupta S; Saccon E; Sonnerberg A; Cao Y; Bjornstedt M; Szakos A
- Show more
All other publications
- Preprint: BIORXIV. 2025Ahlén G; Ambikan A; Mikaeloff F; Rezene S; Yan J; Nikouyan N; Revanna CB; Appelberg S; Mirazimi A; Sallberg M; Neogi U; Gupta S
- Editorial: FRONTIERS IN IMMUNOLOGY. 2023;14:1148296Sparrer KMJ; Bergeron E; Gupta S
- Review: JOURNAL OF PROTEOME RESEARCH. 2020;19(11):4259-4274Sperk M; van Domselaar R; Rodriguez JE; Mikaeloff F; Vinhas BS; Saccon E; Sonnerborg A; Singh K; Gupta S; Vegvari A; Neogi U
- Editorial: ECLINICALMEDICINE. 2020;18:100251Gupta S; Neogi U
- Editorial: MICROBIAL CELL. 2018;5(5):259-261Gupta S; Yla-Anttila P; Masucci MG
- Letter: CLINICAL LABORATORY. 2013;59(7-8):929-931Gupta S; Shamsundar R; Shet A; Srinivasa H
- Letter: JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY. 2012;67(5):1293-1295Gupta S; Aruna C; Nagaraj S; Dias M; Muralidharan S
Grants
- Swedish Research Council1 January 2022 - 31 December 2025
Employments
- Assistant Senior Lecturer, Department of Laboratory Medicine, Karolinska Institutet, 2025-
- Assistant Professor, Department of Laboratory Medicine, Karolinska Institutet, 2019-2025
Degrees and Education
- Docent, Karolinska Institutet, 2026