Akos Vegvari

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Head of facility - Proteomics Biomedicum

Articles

Journal article: OSTEOARTHRITIS AND CARTILAGE OPEN. 2025;7(1):100543
Proteomic analysis reveals biomarkers associated with performance-based joint function and patient-reported outcomes in knee osteoarthritis
Naili JE; Ahmed AS; Hedstrom M; Simonsen MB; Brostrom EW; Harris HE; Vegvari A; Aulin C
Journal article: BRAIN, BEHAVIOR, AND IMMUNITY. 2025;123:914-927
SARS-CoV-2 variants mediated tissue-specific metabolic reprogramming determines the disease pathophysiology in a hamster model
Sardarni UK; Ambikan A; Acharya A; Johnson S; Avedissian SN; Vegvari A; Neogi U; Byrareddy SN
Journal article: ISCIENCE. 2024;27(11):111167
tRNA regulation and amino acid usage bias reflect a coordinated metabolic adaptation in Plasmodium falciparum
Li Q; Vetter L; Veith Y; Christ E; Vegvari A; Sahin C; Ribacke U; Wahlgren M; Ankarklev J; Larsson O; Chan SC-L
Journal article: ALLERGY. EUROPEAN JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY. 2024;79(11):3062-3081
Network analysis reveals age- and virus-specific circuits in nasal epithelial cells of extremely premature infants
Wisgrill L; Martens A; Kasbauer R; Eigenschink M; Pummer L; Redlberger-Fritz M; Vegvari A; Warth B; Berger A; Fyhrquist N; Alenius H
Article: JCI INSIGHT. 2024;9(20):e178645
Quantitative proteomics of patient fibroblasts reveal biomarkers and diagnostic signatures of mitochondrial disease
Correia SP; Moedas MF; Taylor LS; Naess K; Lim AZ; McFarland R; Kazior Z; Rumyantseva A; Wibom R; Engvall M; Bruhn H; Lesko N; Vegvari A; Kall L; Trost M; Alston CL; Freyer C; Taylor RW; Wedell A; Wredenberg A
Journal article: BRITISH JOURNAL OF ANAESTHESIA. 2024;:S0007-0912(24)00553-1
Changes in circulating extracellular vesicle cargo are associated with cognitive decline after major surgery: an observational case-control study.
Mkrtchian S; Eldh M; Ebberyd A; Gabrielsson S; Végvári Á; Ricksten S-E; Danielson M; Oras J; Wiklund A; Eriksson LI; Gómez-Galán M
Journal article: JOURNAL OF EXTRACELLULAR VESICLES. 2024;13(10):e70004
Bacterial extracellular vesicles as intranasal postbiotics: Detailed characterization and interaction with airway cells
Razim A; Zablocka A; Schmid A; Thaler M; Cerny V; Weinmayer T; Whitehead B; Martens A; Skalska M; Morandi M; Schmidt K; Wysmolek ME; Vegvari A; Srutkova D; Schwarzer M; Neuninger L; Nejsum P; Hrdy J; Palmfeldt J; Brucale M; Valle F; Gorska S; Wisgrill L; Inic-Kanada A; Wiedermann U; Schabussova I
Journal article: ADVANCED SCIENCE. 2024;11(38):e2401502
Multifaceted Proteome Analysis at Solubility, Redox, and Expression Dimensions for Target Identification
Saei AA; Lundin A; Lyu H; Gharibi H; Luo H; Teppo J; Zhang X; Gaetani M; Vegvari A; Holmdahl R; Gygi SP; Zubarev RA
Article: ENDOCRINE-RELATED CANCER. 2024;31(9):e230061
Genetic variants and down-regulation of CACNA1H in pheochromocytoma.
Svahn F; Solhusløkk Höse K; Stenman A; Liu Y; Calissendorff J; Tham E; Végvári Á; Zubarev RA; Wang N; Korah R; Carling T; Zedenius J; Bränström R; Juhlin CC; Larsson C
Journal article: ANALYTICAL CHEMISTRY. 2024;96(33):13533-13541
Gel-Assisted Proteome Position Integral Shift Assay Returns Molecular Weight to Shotgun Proteomics and Identifies Caspase 3 Substrates
Meng Z; Saei AA; Gharibi H; Zhang X; Lyu H; Lundstrom SL; Vegvari A; Gaetani M; Zubarev RA
Article: BRAIN. 2024;147(7):2384-2399
A cell autonomous regulator of neuronal excitability modulates tau in Alzheimer's disease vulnerable neurons
Rodriguez-Rodriguez P; Arroyo-Garcia LE; Tsagkogianni C; Li L; Wang W; Vegvari A; Salas-Allende I; Plautz Z; Cedazo-Minguez A; Sinha SC; Troyanskaya O; Flajolet M; Yao V; Roussarie J-P
Journal article: INTERNATIONAL JOURNAL OF ORAL SCIENCE. 2024;16(1):43
A multi-platform analysis of human gingival crevicular fluid reveals ferroptosis as a relevant regulated cell death mechanism during the clinical progression of periodontitis
Torres A; Michea MA; Vegvari A; Arce M; Perez V; Alcota M; Morales A; Vernal R; Budini M; Zubarev RA; Gonzalez FE
Journal article: NATURE COMMUNICATIONS. 2024;15(1):4513
Proteomic analysis of the urothelial cancer landscape
Dressler FF; Diedrichs F; Sabtan D; Hinrichs S; Krisp C; Gemoll T; Hennig M; Mackedanz P; Schlotfeldt M; Voss H; Offermann A; Kirfel J; Roesch MC; Struck JP; Kramer MW; Merseburger AS; Gratzke C; Schoeb DS; Miernik A; Schlueter H; Wetterauer U; Zubarev R; Perner S; Wolf P; Vegvari A
Journal article: ALGAL RESEARCH. 2024;79:103459
Botryococcus braunii autolysate for the production of deuterium-labeled recombinant protein
Koruza K; Krupinska E; Sele C; Végvári Á; Knecht W; Fisher SZ
Journal article: OSTEOARTHRITIS AND CARTILAGE. 2024;32:S479-S480
BIOFUNC: IDENTIFYING OSTEOARTHRITIS-SPECIFIC PROTEINS ASSOCIATED WITH OBJECTIVELY EVALUATED PERFORMANCE-BASED JOINT FUNCTION AND PATIENT REPORTED PAIN
Naili J; Hedstrom M; Ahmed AS; Simonsen MB; Brostrom EW; Harris H; Vegvari A; Aulin C
Journal article: CANCER RESEARCH. 2024;84(6_Supplement):5138
Abstract 5138: Proteomic analyses of the urothelial cancer landscape reveal highly distinct prognostic and predictive subtypes
Dressler FF; Diedrichs F; Sabtan D; Hinrichs S; Mackedanz P; Schlotfeldt M; Krisp C; Hennig M; Schlueter H; Wetterauer U; Zubarev R; Horst D; Perner S; Wolf P; Végvári Á
Article: NATURE COMMUNICATIONS. 2024;15(1):2358
Epigenetic modulators link mitochondrial redox homeostasis to cardiac function in a sex-dependent manner
ElBeck Z; Hossain MB; Siga H; Oskolkov N; Karlsson F; Lindgren J; Walentinsson A; Koppenhofer D; Jarvis R; Burli R; Jamier T; Franssen E; Firth M; Degasperi A; Bendtsen C; Menzies RI; Streckfuss-Bomeke K; Kohlhaas M; Nickel AG; Lund LH; Maack C; Vegvari A; Betsholtz C
Article: BIOTECHNOLOGY JOURNAL. 2024;19(3):e2300684
Proteomic workflows for deep phenotypic profiling of 3D organotypic liver models
Koutsilieri S; Mickols E; Vegvari A; Lauschke VM
Journal article: ANGEWANDTE CHEMIE INTERNATIONAL EDITION. 2024;136(3)
Ultralight Ultrafast Enzymes**
Zhang X; Meng Z; Beusch CM; Gharibi H; Cheng Q; Lyu H; Di Stefano L; Wang J; Saei AA; Végvári Á; Gaetani M; Zubarev RA
Article: ANGEWANDTE CHEMIE INTERNATIONAL EDITION. 2024;63(3):e202316488
Ultralight Ultrafast Enzymes
Zhang X; Meng Z; Beusch CM; Gharibi H; Cheng Q; Lyu H; Di Stefano L; Wang J; Saei AA; Vegvari A; Gaetani M; Zubarev RA
Article: FRONTIERS IN ONCOLOGY. 2024;14:1273780
Cancer cell immunity-related protein co-expression networks are associated with early-stage solid-predominant lung adenocarcinoma
Nishimura T; Vegvari A; Nakamura H; Fujii K; Sakai H; Naruki S; Furuya N; Saji H
Journal article: EUROPEAN HEART JOURNAL. 2023;44:ehad655.3055
Role of methyltransferase Set7 in obesity-related endothelial activation: functions beyond histone methylation
Ceinos JS; Dottling P; Jakobsson ME; Vegvari A; Cosentino F
Article: ACTA BIOMATERIALIA. 2023;171:336-349
3D microperfusion of mesoscale human microphysiological liver models improves functionality and recapitulates hepatic zonation
Wesseler MF; Taebnia N; Harrison S; Youhanna S; Preiss LC; Kemas AM; Vegvari A; Mokry J; Sullivan GJ; Lauschke VM; Larsen NB
Article: JOURNAL OF BIOLOGICAL CHEMISTRY. 2023;299(11):105320
Autoreactive B cells against malondialdehyde-induced protein cross-links are present in the joint, lung, and bone marrow of rheumatoid arthritis patients
Sahlstrom P; Joshua V; Valkovskaia V; Biese C; Stalesen R; Israelsson L; Vegvari A; Scheel-Toellner D; Klareskog L; Hansson M; Hensvold A; Malmstrom V; Gronwall C
Article: JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY. 2023;34(10):2098-2106
Toward Single Bacterium Proteomics
Vegvari A; Zhang X; Zubarev RA
Article: JOURNAL OF PERIODONTAL RESEARCH. 2023;58(5):1061-1081
Proteomic profile of human gingival crevicular fluid reveals specific biological and molecular processes during clinical progression of periodontitis
Torres A; Michea MA; Vegvari A; Arce M; Morales A; Lanyon E; Alcota M; Fuentes C; Vernal R; Budini M; Zubarev RA; Gonzalez FE
Article: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2023;120(37):e2304722120
Systems-level temporal immune- metabolic profile in Crimean-Congo hemorrhagic fever virus infection
Ambikan AT; Elaldi N; Akusjaervi SS; Bagci B; Pektas AN; Hewson R; Bagci G; Arasli M; Appelberg S; Mardinoglu A; Sood V; Vegvari A; Benfeitas R; Gupta S; Cetin I; Mirazimi A; Neogi U
Journal article: GAIT AND POSTURE. 2023;106:s53-s54
Objectively evaluated joint function and patient-reported pain are associated with differences in the proteomic landscape of knee osteoarthritis
Naili JE; Hedström M; Ahmed A; Simonsen MB; Broström EW; Harris HE; Vegvari A; Aulin C
Article: CELLULAR AND MOLECULAR LIFE SCIENCES. 2023;80(9):268
Analysis of local extracellular matrix identifies different aetiologies behind bicuspid and tricuspid aortic valve degeneration and suggests therapies
Beusch CM; Simonson OE; Wedin JO; Sabatier P; Felldin U; Kadekar S; Osterholm C; Vegvari A; Zubarev RA; Fromell K; Nilson B; James S; Stahle E; Grinnemo K-H; Rodin S
Article: LEARNING & MEMORY (COLD SPRING HARBOR, N.Y.). 2023;30(5-6):116-123
Distribution, cellular localization, and colocalization of several peptide neurotransmitters in the central nervous system of Aplysia
Hawkins RD; Brodin L; Theodorsson E; Vegvari A; Kandel ER; Hokfelt T
Article: INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS. 2023;61(5):106792
Naturally occurring dipeptide from elite controllers with dual anti-HIV-1 mechanism
Cena-Diez R; Narayanan A; Ray S; van de Klundert M; Rodriguez JE; Nilvebrant J; Nygren P-A; Vegvari A; van Domselaar R; Sonnerborg A
Article: JCI INSIGHT. 2023;8(7):e164875
NCF1-dependent production of ROS protects against lupus by regulating plasmacytoid dendritic cell development and functions
Luo H; Urbonaviciute V; Saei AA; Lyu H; Gaetani M; Vegvari A; Li Y; Zubarev RA; Holmdahl R
Article: JOURNAL OF TRANSLATIONAL MEDICINE. 2023;21(1):41
Panomics reveals patient individuality as the major driver of colorectal cancer progression
Praus F; Kuenstner A; Sauer T; Kohl M; Kern K; Deichmann S; Vegvari A; Keck T; Busch H; Habermann JKK; Gemoll T
Article: FRONTIERS IN IMMUNOLOGY. 2023;14:1149107
Brain endothelial cells exposure to malaria parasites links type I interferon signalling to antigen presentation, immunoproteasome activation, endothelium disruption, and cellular metabolism
Shafi AM; Vegvari A; Zubarev RA; Penha-Goncalves C
Article: FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY. 2023;13:1085908
Non-typeable Haemophilus influenzae major outer membrane protein P5 contributes to bacterial membrane stability, and affects the membrane protein composition crucial for interactions with the human host
Su Y-C; Kadari M; Straw MLL; Janouskova M; Jonsson S; Thofte O; Jalalvand F; Matuschek E; Sandblad L; Vegvari A; Zubarev RAA; Riesbeck K
Article: SCIENTIFIC REPORTS. 2022;12(1):20051
Plasma proteomic profiling in postural orthostatic tachycardia syndrome (POTS) reveals new disease pathways
Johansson M; Yan H; Welinder C; Vegvari A; Hamrefors V; Back M; Sutton R; Fedorowski A
Article: ANALYTICAL CHEMISTRY. 2022;94(26):9261-9269
Single-Cell Chemical Proteomics (SCCP) Interrogates the Timing and Heterogeneity of Cancer Cell Commitment to Death
Vegvari A; Rodriguez JE; Zubarev RA
Article: ACS APPLIED BIO MATERIALS. 2022;5(6):2643-2663
Mass Spectrometry, Structural Analysis, and Anti-Inflammatory Properties of Photo-Cross-Linked Human Albumin Hydrogels
Sharifi S; Saei AA; Gharibi H; Mahmoud NN; Harkins S; Dararatana N; Lisabeth EM; Serpooshan V; Vegvari A; Moore A; Mahmoudi M
Article: CELLS. 2022;11(10):1597
Hepatocyte Thorns, A Novel Drug-Induced Stress Response in Human and Mouse Liver Spheroids
Pridgeon CS; Bolhuis DP; Milosavljevic F; Manojlovic M; Vegvari A; Gaetani M; Jukic MM; Ingelman-Sundberg M
Article: ELIFE. 2022;11:e76071
Multi-omics insights into host-viral response and pathogenesis in Crimean-Congo hemorrhagic fever viruses for novel therapeutic target
Neogi U; Elaldi N; Appelberg S; Ambikan A; Kennedy E; Dowall S; Bagci BK; Gupta S; Rodriguez JE; Svensson-Akusjarvi S; Monteil V; Vegvari A; Benfeitas R; Banerjea A; Weber F; Hewson R; Mirazimi A
Article: COMMUNICATIONS BIOLOGY. 2022;5(1):357
Peripheral blood CD4⁺CCR6⁺ compartment differentiates HIV-1 infected or seropositive elite controllers from long-term successfully treated individuals
Svensson Akusjarvi S; Krishnan S; Jutte BB; Ambikan AT; Gupta S; Rodriguez JE; Vegvari A; Sperk M; Nowak P; Vesterbacka J; Svensson JP; Sonnerborg A; Neogi U
Article: JOURNAL OF VIROLOGY. 2022;96(3):e0156821-e01521
Nucleoside-Modified mRNA Vaccines Protect IFNAR^-/- Mice against Crimean-Congo Hemorrhagic Fever Virus Infection
Appelberg S; John L; Pardi N; Vegvari A; Bereczky S; Ahlen G; Monteil V; Abdurahman S; Mikaeloff F; Beattie M; Tam Y; Sallberg M; Neogi U; Weissman D; Mirazimi A
Article: ISCIENCE. 2022;25(1):103607
Integrative proteo-transcriptomic and immunophenotyping signatures of HIV-1 elite control phenotype: A cross-talk between glycolysis and HIF signaling
Akusjarvi SS; Ambikan AT; Krishnan S; Gupta S; Sperk M; Vegvari A; Mikaeloff F; Healy K; Vesterbacka J; Nowak P; Sonnerborg A; Neogi U
Article: COMMUNICATIONS BIOLOGY. 2022;5(1):27
Trans cohort metabolic reprogramming towards glutaminolysis in long-term successfully treated HIV-infection
Mikaeloff F; Akusjarvi SS; Ikomey GM; Krishnan S; Sperk M; Gupta S; Magdaleno GDV; Escos A; Lyonga E; Okomo MC; Tagne CT; Babu H; Lorson CL; Vegvari A; Banerjea AC; Kele J; Hanna LE; Singh K; de Magalhaes JP; Benfeitas R; Neogi U
Article: METHODS IN MOLECULAR BIOLOGY. 2022;2420:63-72
Mass Spectrometry-Based Analytical Strategy for Single-Cell Proteomics.
Végvári Á
Article: METHODS IN MOLECULAR BIOLOGY. 2022;2386:113-127
Single Cell Proteomics Using Multiplexed Isobaric Labeling for Mass Spectrometric Analysis.
Végvári Á; Rodriguez JE; Zubarev RA
Article: HUMAN MOLECULAR GENETICS. 2021;30(21):2012-2026
Coordinated pyruvate kinase activity is crucial for metabolic adaptation and cell survival during mitochondrial dysfunction
Zhou X; Mikaeloff F; Curbo S; Zhao Q; Kuiper R; Vegvari A; Neogi U; Karlsson A
Article: JOURNAL OF IMMUNOLOGY. 2021;207(3):974-984
Citrullination Alters the Antibacterial and Anti-Inflammatory Functions of the Host Defense Peptide Canine Cathelicidin K9CATH In Vitro
Al Adwani S; Padhi A; Karadottir H; Morman C; Graslund A; Vegvari A; Johansson J; Rising A; Agerberth B; Bergman P
Article: ISCIENCE. 2021;24(5):102420
Cell-type-resolved quantitative proteomics map of interferon response against SARS-CoV-2
Saccon E; Chen X; Mikaeloff F; Rodriguez JE; Szekely L; Vinhas BS; Krishnan S; Byrareddy SN; Frisan T; Vegvari A; Mirazimi A; Neogi U; Gupta S
Article: CELL DEATH DISCOVERY. 2021;7(1):114
Type-I interferon signatures in SARS-CoV-2 infected Huh7 cells
Chen X; Saccon E; Appelberg KS; Mikaeloff F; Rodriguez JE; Vinhas BS; Frisan T; Vegvari A; Mirazimi A; Neogi U; Gupta S
Article: CANCERS. 2021;13(5):1010
EPHA2 Interacts with DNA-PK_cs in Cell Nucleus and Controls Ionizing Radiation Responses in Non-Small Cell Lung Cancer Cells
Kaminskyy VO; Haag P; Novak M; Vegvari A; Arapi V; Lewensohn R; Viktorsson K
Article: NATURE COMMUNICATIONS. 2021;12(1):1296
System-wide identification and prioritization of enzyme substrates by thermal analysis
Saei AA; Beusch CM; Sabatier P; Wells JA; Gharibi H; Meng Z; Chernobrovkin A; Rodin S; Nareoja K; Thorsell A-G; Karlberg T; Cheng Q; Lundstrom SL; Gaetani M; Vegvari A; Arner ESJ; Schuler H; Zubarev RA
Article: SCIENCE ADVANCES. 2021;7(8):eabf0717
The one-carbon pool controls mitochondrial energy metabolism via complex I and iron-sulfur clusters
Schober FA; Moore D; Atanassov I; Moedas MF; Clemente P; Vegvari A; El Fissi N; Filograna R; Bucher A-L; Hinze Y; The M; Hedman E; Chernogubova E; Begzati A; Wibom R; Jain M; Nilsson R; Kall L; Wedell A; Freyer C; Wredenberg A
Article: MOLECULAR & CELLULAR PROTEOMICS. 2021;20:100159
Metabolic Perturbation Associated With COVID-19 Disease Severity and SARS-CoV-2 Replication
Krishnan S; Nordqvist H; Ambikan AT; Gupta S; Sperk M; Svensson-Akusjarvi S; Mikaeloff F; Benfeitas R; Saccon E; Ponnan SM; Rodriguez JE; Nikouyan N; Odeh A; Ahlen G; Asghar M; Sallberg M; Vesterbacka J; Nowak P; Vegvari A; Sonnerborg A; Treutiger CJ; Neogi U
Article: FRONTIERS IN IMMUNOLOGY. 2021;12:669347
Cytotoxic Lymphocytes Target HIV-1 Gag Through Granzyme M-Mediated Cleavage
Saccon E; Mikaeloff F; Ivern PF; Vegvari A; Sonnerborg A; Neogi U; van Domselaar R
Article: LEUKEMIA. 2020;34(12):3323-3337
S100A6 is a critical regulator of hematopoietic stem cells
Grahn THM; Niroula A; Vegvari A; Oburoglu L; Pertesi M; Warsi S; Safi F; Miharada N; Garcia SC; Siva K; Liu Y; Rorby E; Nilsson B; Zubarev RA; Karlsson S
Article: EMERGING MICROBES AND INFECTIONS. 2020;9(1):1748-1760
Dysregulation in Akt/mTOR/HIF-1 signaling identified by proteo-transcriptomics of SARS-CoV-2 infected cells
Appelberg S; Gupta S; Svensson Akusjarvi S; Ambikan AT; Mikaeloff F; Saccon E; Vegvari A; Benfeitas R; Sperk M; Stahlberg M; Krishnan S; Singh K; Penninger JM; Mirazimi A; Neogi U
Article: SCIENTIFIC REPORTS. 2020;10(1):2376
Studies on citrullinated LL-37: detection in human airways, antibacterial effects and biophysical properties
Al-Adwani S; Wallin C; Balhuizen MD; Veldhuizen EJA; Coorens M; Landreh M; Vegvari A; Smith ME; Qvarfordt I; Linden A; Graslund A; Agerberth B; Bergman P
Article: FRONTIERS IN ONCOLOGY. 2020;10:1494
Mutant Proteomics of Lung Adenocarcinomas Harboring Different EGFR Mutations
Nishimura T; Vegvari A; Nakamura H; Kato H; Saji H
Article: NATURE COMMUNICATIONS. 2019;10(1):5715
ProTargetMiner as a proteome signature library of anticancer molecules for functional discovery
Saei AA; Beusch CM; Chernobrovkin A; Sabatier P; Zhang B; Tokat UG; Stergiou E; Gaetani M; Vegvari A; Zubarev RA
Article: JACC: BASIC TO TRANSLATIONAL SCIENCE. 2019;4(4):480-494
Malondialdehyde Conjugated With Albumin Induces Pro-Inflammatory Activation of T Cells Isolated From Human Atherosclerotic Plaques Both Directly and Via Dendritic Cell-Mediated Mechanism
Rahman M; Steuer J; Gillgren P; Vegvari A; Liu A; Frostegard J
Article: ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS. 2018;645:26-33
Deuteration of human carbonic anhydrase for neutron crystallography: Cell culture media, protein thermostability, and crystallization behavior
Koruza K; Lafumat B; Vegvari A; Knecht W; Fisher SZ
Article: ACS CHEMICAL NEUROSCIENCE. 2018;9(1):73-79
Large Scale Identification of Variant Proteins in Glioma Stem Cells
Mostovenko E; Vegvari A; Rezeli M; Lichti CF; Fenyo D; Wang Q; Lang FF; Sulman EP; Sahlin KB; Marko-Varga G; Nilsson CL
Article: CURRENT ANALYTICAL CHEMISTRY. 2017;13(3):182-186
In vivo Distribution of Tiotropium in a Rodent Model Utilizing AP-SMALDI Mass Spectrometry Imaging
Vegvari A; Fehniger TE; Dahlback M; Marko-Varga G; Strupat K
Article: MOLECULAR NUTRITION AND FOOD RESEARCH. 2017;61(3)
Relationship between HMF intake and SMF formation in vivo: An animal and human study
Pastoriza de la Cueva S; Alvarez J; Vegvari A; Montilla-Gomez J; Cruz-Lopez O; Delgado-Andrade C; Rufian-Henares JA
Article: THERANOSTICS. 2017;7(2):400-412
Limited Tumor Tissue Drug Penetration Contributes to Primary Resistance against Angiogenesis Inhibitors
Torok S; Rezeli M; Kelemen O; Vegvari A; Watanabe K; Sugihara Y; Tisza A; Marton T; Kovacs I; Tovari J; Laszlo V; Helbich TH; Hegedus B; Klikovits T; Hoda MA; Klepetko W; Paku S; Marko-Varga G; Dome B
Article: CLINICAL AND TRANSLATIONAL MEDICINE. 2016;5(1):10
Localization of tamoxifen in human breast cancer tumors by MALDI mass spectrometry imaging.
Végvári Á; Shavkunov AS; Fehniger TE; Grabau D; Niméus E; Marko-Varga G
Article: ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY. 2016;926:77-91
Mutant Proteogenomics
Vegvari A
Article: JOURNAL OF PROTEOME RESEARCH. 2015;14(9):3441-3451
In Vitro Transcription/Translation System: A Versatile Tool in the Search for Missing Proteins
Horvatovich P; Vegvari A; Saul J; Park JG; Qiu J; Syring M; Pirrotte P; Petritis K; Tegeler TJ; Aziz M; Fuentes M; Diez P; Gonzalez-Gonzalez M; Ibarrola N; Droste C; De Las Rivas J; Gil C; Clemente F; Luisa Hernaez M; Corrales FJ; Nilsson CL; Berven FS; Bischoff R; Fehniger TE; LaBaer J; Marko-Varga G
Article: JOURNAL OF PROTEOME RESEARCH. 2015;14(9):3415-3431
Quest for Missing Proteins: Update 2015 on Chromosome-Centric Human Proteome Project
Horvatovich P; Lundberg EK; Chen Y-J; Sung T-Y; He F; Nice EC; Goode RJ; Yu S; Ranganathan S; Baker MS; Domont GB; Velasquez E; Li D; Liu S; Wang Q; He Q-Y; Menon R; Guan Y; Corrales FJ; Segura V; Casal JI; Pascual-Montano A; Albar JP; Fuentes M; Gonzalez-Gonzalez M; Diez P; Ibarrola N; Degano RM; Mohammed Y; Borchers CH; Urbani A; Soggiu A; Yamamoto T; Salekdeh GH; Archakov A; Ponomarenko E; Lisitsa A; Lichti CF; Mostovenko E; Kroes RA; Rezeli M; Vegvari A; Fehniger TE; Bischoff R; Vizcaino JA; Deutsch EW; Lane L; Nilsson CL; Marko-Varga G; Omenn GS; Jeong S-K; Lim J-S; Paik Y-K; Hancock WS
Article: ANALYTICAL AND BIOANALYTICAL CHEMISTRY. 2015;407(8):2245-2253
Localization of sunitinib in in vivo animal and in vitro experimental models by MALDI mass spectrometry imaging
Connell JJ; Sugihara Y; Torok S; Doeme B; Tovari J; Fehniger TE; Marko-Varga G; Vegvari A
Article: JOURNAL OF PROTEOME RESEARCH. 2015;14(2):778-786
Systematic Identification of Single Amino Acid Variants in Glioma Stem-Cell-Derived Chromosome 19 Proteins
Lichti CF; Mostovenko E; Wadsworth PA; Lynch GC; Pettitt BM; Sulman EP; Wang Q; Lang FF; Rezeli M; Marko-Varga G; Vegvari A; Nilsson CL
Article: JOURNAL OF PROTEOME RESEARCH. 2015;14(2):603-608
Use of ENCODE Resources to Characterize Novel Proteoforms and Missing Proteins in the Human Proteome
Nilsson CL; Mostovenko E; Lichti CF; Ruggles K; Fenyoe D; Rosenbloom KR; Hancock WS; Paik Y-K; Omenn GS; LaBaer J; Kroes RA; Uhlen M; Hober S; Vegvari A; Andren PE; Sulman EP; Lang FF; Fuentes M; Carlsohn E; Emmett MR; Moskal JR; Berven FS; Fehniger TE; Marko-Varga G
Article: BRITISH JOURNAL OF PHARMACOLOGY. 2015;172(4):1148-1163
Localization of sunitinib, its metabolites and its target receptors in tumour-bearing mice: a MALDI-MS imaging study
Torok S; Vegvari A; Rezeli M; Fehniger TE; Tovari J; Paku S; Laszlo V; Hegedus B; Rozsas A; Dome B; Marko-Varga G
Article: ANALYTICAL CHEMISTRY. 2014;86(15):7627-7634
Aptamer/ISET-MS: A New Affinity-Based MALDI Technique for Improved Detection of Biomarkers
Lee SJ; Adler B; Ekstrom S; Rezeli M; Vegvari A; Park J-W; Malm J; Laurell T
Journal article: EUPA OPEN PROTEOMICS. 2014;3:68-75
Inflammatory markers in Huntington's disease plasma—A robust nanoLC–MRM-MS assay development
Rezeli M; Végvári Á; Silajdžić E; Björkqvist M; Tabrizi SJ; Laurell T; Marko-Varga G
Article: PROTEOMICS. 2014;14(7-8):862-871
Queries of MALDI-imaging global datasets identifying ion mass signatures associated with tissue compartments
Fehniger TE; Suits F; Vegvari A; Horvatovich P; Foster M; Marko-Varga G
Article: JOURNAL OF PROTEOME RESEARCH. 2014;13(1):191-199
Integrated Chromosome 19 Transcriptomic and Proteomic Data Sets Derived from Glioma Cancer Stem-Cell Lines
Lichti CF; Liu H; Shavkunov AS; Mostovenko E; Sulman EP; Ezhilarasan R; Wang Q; Kroes RA; Moskal JC; Fenyo D; Oksuz BA; Conrad CA; Lang FF; Berven FS; Vegvari A; Rezeli M; Marko-Varga G; Hober S; Nilsson CL
Article: JOURNAL OF PROTEOME RESEARCH. 2013;12(12):5626-5633
Experimental Models to Study Drug Distributions in Tissue Using MALDI Mass Spectrometry Imaging
Vegvari A; Fehniger TE; Rezeli M; Laurell T; Doeme B; Jansson B; Welinder C; Marko-Varga G
Article: TRANSL RESPIR MED. 2013;1(1):14
Standardization developments for large scale biobanks in smoking related diseases - a model system for blood sample processing and storage.
Malm J; Fehniger TE; Danmyr P; Végvári Á; Welinder C; Lindberg H; Upton P; Carter S; Appelqvist R; Sjödin K; Wieslander E; Dahlbäck M; Rezeli M; Erlinge D; Marko-Varga G
Article: JOURNAL OF PROTEOME RESEARCH. 2013;12(10):4612-4616
Quantification of Human Kallikrein-2 in Clinical Samples by Selected Reaction Monitoring
Vegvari A; Sjodin K; Rezeli M; Marko-Varga G
Article: MOLECULAR & CELLULAR PROTEOMICS. 2013;12(10):2761-2773
Identification of a Novel Proteoform of Prostate Specific Antigen (SNP-L132I) in Clinical Samples by Multiple Reaction Monitoring
Vegvari A; Sjodin K; Rezeli M; Malm J; Lilja H; Laurell T; Marko-Varga G
Article: JOURNAL OF PROTEOMICS. 2013;87:16-25
Development of an MRM assay panel with application to biobank samples from patients with myocardial infarction
Rezeli M; Vegvari A; Donnarumma F; Gidlof O; Smith JG; Erlinge D; Marko-Varga G
Article: JOURNAL OF PROTEOME RESEARCH. 2013;12(7):3087-3092
Blood Plasma Reference Material: A Global Resource for Proteomic Research
Malm J; Danmyr P; Nilsson R; Appelqvist R; Vegvari A; Marko-Varga G
Article: ANALYTICAL CHEMISTRY. 2013;85(9):4398-4404
Correlation Queries for Mass Spectrometry Imaging
Suits F; Fehniger TE; Vegvari A; Marko-Varga G; Horvatovich P
Article: CLINICAL AND TRANSLATIONAL MEDICINE. 2013;2(1):7
Establishing a Southern Swedish Malignant Melanoma OMICS and biobank clinical capability.
Welinder C; Jönsson G; Ingvar C; Lundgren L; Olsson H; Breslin T; Végvári A; Laurell T; Rezeli M; Jansson B; Baldetorp B; Marko-Varga G
Article: JOURNAL OF PROTEOME RESEARCH. 2013;12(1):135-150
Chromosome 19 Annotations with Disease Speciation: A First Report from the Global Research Consortium
Nilsson CL; Berven F; Selheim F; Liu H; Moskal JR; Kroes RA; Sulman EP; Conrad CA; Lang FF; Andren PE; Nilsson A; Carlsohn E; Lilja H; Malm J; Fenyoe D; Subramaniyam D; Wang X; Gonzales-Gonzales M; Dasilva N; Diez P; Fuentes M; Vegvari A; Sjodin K; Welinder C; Laurell T; Fehniger TE; Lindberg H; Rezeli M; Edula G; Hober S; Marko-Varga G
Article: JOURNAL OF HUNTINGTON'S DISEASE. 2013;2(1):125-134
A critical evaluation of inflammatory markers in Huntington's Disease plasma.
Silajdžić E; Rezeli M; Végvári Á; Lahiri N; Andre R; Magnusson-Lind A; Nambron R; Kalliolia E; Marko-Varga G; Warner TT; Laurell T; Tabrizi SJ; Björkqvist M
Journal article: EUPA OPEN PROTEOMICS. 2013;1:3-7
International biobanking for lung cancer and COPD as the future resource for clinical protein research
Fehniger TE; Végvári Á; Rezeli M; Döme B; Tímár J; Marko-Varga G
Article: JOURNAL OF PROTEOMICS. 2012;76:116-124
Large scale biobanking of blood - The importance of high density sample processing procedures
Malm J; Vegvari A; Rezeli M; Upton P; Danmyr P; Nilsson R; Steinfelder E; Marko-Varga G
Article: JOURNAL OF PROTEOME RESEARCH. 2012;11(11):5124-5134
Standardization and Utilization of Biobank Resources in Clinical Protein Science with Examples of Emerging Applications
Marko-Varga G; Vegvari A; Welinder C; Lindberg H; Rezeli M; Edula G; Svensson KJ; Belting M; Laurell T; Fehniger TE
Article: INTERNATIONAL JOURNAL OF PROTEOMICS. 2012;2012:641491-2
Clinical proteomics.
Végvári A; Kondo T; Marshall JG
Article: CLINICAL AND TRANSLATIONAL MEDICINE. 2012;1(1):8
Understanding drug uptake and binding within targeted disease micro-environments in patients: a new tool for translational medicine.
Marko-Varga G; Végvári A; Rezeli M; Prikk K; Ross P; Dahlbäck M; Edula G; Sepper R; Fehniger TE
Journal article: INTERNATIONAL JOURNAL OF PROTEOMICS. 2012;2012:921901-10
Cancer Phenotype Diagnosis and Drug Efficacy within Japanese Health Care.
Nishimura T; Kato H; Ikeda N; Kihara M; Nomura M; Kato Y; Marko-Varga G
Article: CLINICAL BIOCHEMISTRY. 2012;45(4-5):331-338
Molecular microheterogeneity of prostate specific antigen in seminal fluid by mass spectrometry
Vegvari A; Rezeli M; Sihlbom C; Hakkinen J; Carlsohn E; Malm J; Lilja H; Laurell T; Marko-Varga G
Article: JOURNAL OF PROTEOMICS. 2011;75(1):202-210
Bioinformatic strategies for unambiguous identification of prostate specific antigen in clinical samples
Vegvari A; Rezeli M; Hakkinen J; Sihlbom C; Carlsohn E; Malm J; Lilja H; Laurell T; Marko-Varga G
Article: JOURNAL OF PROTEOMICS. 2011;75(1):211-220
MRM assay for quantitation of complement components in human blood plasma - a feasibility study on multiple sclerosis
Rezeli M; Vegvari A; Otteruald J; Olsson T; Laurell T; Marko-Varga G
Article: ANALYTICAL CHEMISTRY. 2011;83(21):8329-8336
Direct Demonstration of Tissue Uptake of an Inhaled Drug: Proof-of-Principle Study Using Matrix-Assisted Laser Desorption Ionization Mass Spectrometry Imaging
Fehniger TE; Vegvari A; Rezeli M; Prikk K; Ross P; Dahlback M; Edula G; Sepper R; Marko-Varga G
Article: JOURNAL OF CLINICAL BIOINFORMATICS. 2011;1(1):24
Biobank resources for future patient care: developments, principles and concepts.
Végvári A; Welinder C; Lindberg H; Fehniger TE; Marko-Varga G
Article: JOURNAL OF PROTEOMICS. 2011;74(7):982-992
Drug localization in different lung cancer phenotypes by MALDI mass spectrometry imaging
Marko-Varga G; Fehniger TE; Rezeli M; Doeme B; Laurell T; Vegvari A
Article: JOURNAL OF CLINICAL BIOINFORMATICS. 2011;1(1):7
Moving towards high density clinical signature studies with a human proteome catalogue developing multiplexing mass spectrometry assay panels.
Rezeli M; Végvári A; Fehniger TE; Laurell T; Marko-Varga G
Article: RETROVIROLOGY. 2009;6:34
Isolation and characterization of a small antiretroviral molecule affecting HIV-1 capsid morphology
Abdurahman S; Vegvari A; Levi M; Hoglund S; Hogberg M; Tong W; Romero I; Balzarini J; Vahlne A
Article: JOURNAL OF CHROMATOGRAPHY B: ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES. 2009;877(10):892-896
Determination of dissociation constants between polyelectrolytes and proteins by affinity capillary electrophoresis
Anderot M; Nilsson M; Vegvari A; Moeller EH; van de Weert M; Isaksson R
Article: JOURNAL OF PROTEOMICS. 2009;71(6):670-681
Identification of novel candidate protein biomarkers for the post-polio syndrome - implications for diagnosis, neurodegeneration and neuroinflammation
Gonzalez H; Ottervald J; Nilsson KC; Sjogren N; Miliotis T; Von Bahr H; Khademi M; Eriksson B; Kjellstrom S; Vegvari A; Harris R; Marko-Varga G; Borg K; Nilsson J; Laurell T; Olsson T; Franzen B
Article: ANALYTICAL CHEMISTRY. 2009;81(1):343-348
General Approach for Certain Quantitative Calculations for Instance of the Variance of Reversible Adsorption to the Capillary Wall in CE
Farkas V; Rezeli M; Vegvari A; Kilar F; Hjerten S
Article: ANTIMICROBIAL AGENTS AND CHEMOTHERAPY. 2008;52(10):3737-3744
Activity of the small modified amino acid α-hydroxy glycineamide on in vitro and in vivo human immunodeficiency virus type 1 capsid assembly and infectivity
Abdurahman S; Vegvari A; Youssefi M; Levi M; Hoglund S; Andersson E; Horal P; Svennerholm B; Balzarini J; Vahlne A
Article: ELECTROPHORESIS. 2008;29(12):2696-2705
Implementation of a protein profiling platform developed as an academic-pharmaceutical industry collaborative effort
Vegvari A; Magnusson M; Wallman L; Ekstrom S; Bolmsjo G; Nilsson J; Miliotis T; Ostling J; Kjellstrom S; Ottervald J; Franzen B; Hultberg H; Marko-Varga G; Laurell T
Article: ELECTROPHORESIS. 2007;28(14):2345-2350
Universal method for synthesis of artificial gel antibodies by the imprinting approach combined with a unique electrophoresis technique for detection of minute structural differences of proteins viruses and cells, (bacteria). lb. Gel antibodies against proteins (hemoglobins)
Takatsy A; Vegvari A; Hjerten S; Kilar F
Article: ELECTROPHORESIS. 2006;27(23):4682-4687
Universal method for synthesis of artificial gel antibodies by the imprinting approach combined with a unique electrophoresis technique for detection of minute structural differences of proteins, viruses, and cells (bacteria).: III:: Gel antibodies against cells (bacteria)
Bacskay I; Takatsy A; Vegvari A; Elfwing A; Balllagi-Pordany A; Kilar F; Hjerten S
Article: ELECTROPHORESIS. 2003;24(21):3815-3820
Hybrid microdevice electrophoresis of peptides, proteins, DNA, viruses, and bacteria in various separation media, using UV-detection
Végvári A; Hjertén S
Article: CHEMBIOCHEM. 2002;3(11):1117-1125
High-resolution capillary zone and gel electrophoresis of structurally similar amphipathic glutathione conjugates based on interaction with β-cyclodextrins
Végvári A; Larsson AK; Hjertén S; Mannervik B
Article: ANTIMICROBIAL AGENTS AND CHEMOTHERAPY. 2002;46(11):3597-3605
Tripeptide interference with human immunodeficiency virus type 1 morphogenesis
Höglund S; Su J; Reneby SS; Végvári A; Hjertén S; Sintorn IM; Foster H; Wu YP; Nyström I; Vahlne A
Article: ELECTROPHORESIS. 2002;23(20):3479-3486
A hybrid microdevice for electrophoresis and electrochromatography using UV detection
Végvári A; Hjertén S
Article: JOURNAL OF CHROMATOGRAPHY A. 2002;960(1-2):221-227
Stable homogeneous gel for molecular-sieving of DNA fragments in capillary electrophoresis
Végvári A; Hjertén S
Article: ELECTROPHORESIS. 2001;22(12):2616-2619
Enantioseparation of hydroxy acids on easy-to-prepare continuous beds for capillary electrochromatography
Schmid MG; Grobuschek N; Lecnik O; Gübitz G; Végvári A; Hjertén S
Article: ELECTROPHORESIS. 2000;21(15):3141-3144
Chiral separation of amino acids by ligand-exchange capillary electrochromatography using continuous beds
Schmid MG; Grobuschek N; Tuscher C; Gübitz G; Végvári A; Machtejevas E; Maruska A; Hjertén S
Article: ELECTROPHORESIS. 2000;21(15):3116-3125
A new easy-to-prepare homogeneous continuous electrochromatographic bed for enantiomer recognition
Végvári A; Földesi A; Hetényi C; Kocnegarova O; Schmid MG; Kudirkaite V; Hjertén S
Article: JOURNAL OF CHROMATOGRAPHY A. 1999;837(1-2):25-33
(Normal-phase) capillary chromatography using acrylic polymer-based continuous beds
Maruska A; Ericson C; Végvári A; Hjertén S
Article: ELECTROPHORESIS. 1998;19(12):2109-2112
Chiral separation of α-amino acids by ligand-exchange capillary electrophoresis using N-(2-hydroxy-octyl)-L-4-hydroxyproline as a selector
Végvári A; Schmid MG; Kilár F; Gübitz G
Article: JOURNAL OF CAPILLARY ELECTROPHORESIS AND MICROCHIP TECHNOLOGY. 1998;5(1-2):13-26
An approach to ideal separation media for (electro)chromatography
Hjertén S; Végvári A; Srichaiyo T; Zhang HX; Ericson C; Eaker D
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All other publications

Preprint: BIORXIV. 2024
Characterization of the HLA-DR immunopeptidome of bronchoalveolar lavage cells in patients with newly diagnosed rheumatoid arthritis and healthy current-smoker controls
Zöhrer B; Végvári Á; Bonatti M; Kolosenko I; Wagner N; Checa A; Joshua V; Sköld M; Lundberg K; Klareskog L; Malmström V; Wheelock Å
Preprint: BIORXIV. 2024
Tissue-specific responses to TFAM and mtDNA copy number manipulation in prematurely ageing mice
Kremer L; Gao G; Rigoni G; Filograna R; Mennuni M; Wibom R; Végvári Á; Koolmeister C; Larsson N-G
Preprint: BIORXIV. 2024
microRNA and non-targeted proteome analysis of liquid biopsies from the distal lung collected by Particles in Exhaled Air (PExA) reveals presence from extracellular vesicles
Bonatti M; Ezerskyte M; Lindberg P; Zöhrer B; Kolosenko I; Végvári Á; Wheelock ÅM
Preprint: BIORXIV. 2024
Mouse PAW: reverse-translating the FINGER multimodal lifestyle intervention enhances synaptic plasticity and cognition in adult wild type female mice
Alanko V; Eroli F; Végvári Á; Solomon A; Hartmann T; Nilsson P; Kivipelto M; Maioli S; Matton A
Conference publication: EUROPEAN RESPIRATORY JOURNAL. 2024;64:pa436
HLA-DR immunopeptidomics on cells from bronchoalveolar lavage in early rheumatoid arthritis
Zohrer B; Vegvari A; Joshua V; Kolosenko I; Padyukov L; Jakobsson P-J; Skold M; Lundberg K; Malmstrom V; Klareskog L; Wheelock AM
Preprint: BIORXIV. 2024
Silk-Ovarioids: Establishment and characterization of human ovarian primary cells 3D-model system
Di Nisio V; Li T; Xiao Z; Papaikonomou K; Damdimopoulos A; Végvári Á; Lebre F; Alfaro-Moreno E; Pedersen M; Svingen T; Zubarev R; Acharya G; Damdimopoulou P; Salumets A
Conference publication: AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE. 2024;209:a2566
Mirna Detection Using Particles in Exhaled Air (PExA): Development and Validation for Investigating Pulmonary Disorders
Wheelock AM; Bonatti M; Ezerskyte M; Lindberg P; Kolosenko I; Vegvari A
Preprint: BIORXIV. 2024
TISSUE-SPECIFIC METABOLOMIC REPROGRAMMING DETERMINES THE DISEASE PATHOPHYSIOLOGY OF SARS-COV-2 VARIANTS IN HAMSTER MODEL
Sardarni UK; Ambikan A; Acharya A; Johnson S; Avedissian S; Vegvari A; Neogi U; Byrareddy S
Preprint: BIORXIV. 2024
Gel-Assisted Proteome Position Integral Shift (GAPPIS) Assay Returns Molecular Weight to Shotgun Proteomics and Identifies Novel Caspase 3 Substrates
Meng Z; Saei AA; Zhang X; Lyu H; Gharibi H; Lundström S; Végvári Á; Gaetani M; Zubarev R
Editorial comment: FRONTIERS IN ONCOLOGY. 2024;14:1383838
Editorial: Mass spectrometry-based proteogenomics - advances in mutant proteomics and clinical oncology
Vegvari A; Nishimura T
Book chapter: METHODS IN MOLECULAR BIOLOGY. 2024;p. 33-43
A Sample Preparation Procedure for Isobaric Labeling-Based Single-Cell Proteomics.
Marín-Vicente C; Calvo E; Rodríguez JM; Villa Del Campo C; Sierra R; Végvári Á; Zubarev RA; Torres M; Vázquez J
Book chapter: METHODS IN MOLECULAR BIOLOGY. 2024;p. 133-143
EquiCP: Targeted Single-Cell Proteomics by Mass Spectrometry with Isobaric Labeled Multiplexing.
Naval P; Pañeda LP; Athanasopoulou M; Teppo JS; Zubarev RA; Végvári Á
Book chapter: METHODS IN MOLECULAR BIOLOGY. 2024;p. c1
Correction to: A Sample Preparation Procedure for Isobaric Labeling-Based Single-Cell Proteomics.
Marín-Vicente C; Calvo E; Rodríguez JM; Villa Del Campo C; Sierra R; Végvári Á; Zubarev RA; Torres M; Vázquez J
Meeting abstract: EUROPEAN RESPIRATORY JOURNAL. 2023;62:pa2220
Late Breaking Abstract - HLA-DR immunopeptidomics on cells from bronchoalveolar lavage
Zohrer B; Vegvari A; Grunewald J; Wheelock AM
Preprint: BIORXIV. 2023
Multifaceted proteome analysis at solubility, redox, and expression dimensions for target identification
Saei AA; Lundin A; Lyu H; Gharibi H; Luo H; Teppo J; Zhang X; Gaetani M; Végvári Á; Holmdahl R; Gygi S; Zubarev R
Preprint: RES SQ. 2023;RES SQ
Proteomic landscape of astrocytes and pericytes infected with HIV/SARS-CoV-2 mono/co-infection, impacting on neurological complications.
Acharya A; Ambikan AT; Thurman M; Malik MR; Dyavar SR; Végvári Á; Neogi U; Byrareddy SN
Preprint: BIORXIV. 2023
Amino acid usage and tRNA expression underlies proteome adaptation inPlasmodium falciparum
Li Q; Vetter L; Veith Y; Christ E; Végvári Á; Sahin C; Ribacke U; Wahlgren M; Ankarklev J; Larsson O; Chan SC-L
Corrigendum: FRONTIERS IN IMMUNOLOGY. 2023;14:1331366
Brain endothelial cells exposure to malaria parasites links type I interferon signalling to antigen presentation, immunoproteasome activation, endothelium disruption, and cellular metabolism (vol 14, 1149107, 2023)
Shafi AM; Vegvari A; Howland SW; Zubarev RA; Renia L; Penha-Goncalves C
Preprint: BIORXIV. 2022
Brain endothelial cells exposure to malaria parasites links Type I interferon signalling to antigen presentation, immunoproteasome activation, endothelium disruption and cell metabolic adaptation
Shafi AM; Végvári Á; Zubarev R; Penha-Gonçalves C
Preprint: MEDRXIV. 2022
Panomics reveals patient-individuality as the major driver for colorectal cancer progression
Praus F; Künstner A; Sauer T; Kohl M; Kern K; Deichmann S; Végvári Á; Keck T; Busch H; Habermann J; Gemoll T
Preprint: BIORXIV. 2022
Mapping the GALNT1 substrate landscape with versatile proteomics tools
Saei AA; Lundström S; Lyu H; Gharibi H; Lu W; Fang P; Zhang X; Meng Z; Wang J; Gaetani M; Végvári Á; Gygi S; Zubarev R
Preprint: BIORXIV. 2022
Epigenetic modulators link mitochondrial redox homeostasis to cardiac function
Elbeck Z; Hossain MB; Siga H; Oskolkov N; Karlsson F; Lindgren J; Walentinsson A; Remedios CD; Koppenhöfer D; Jarvis R; Bürli R; Jamier T; Franssen E; Firth M; Degasperi A; Bendtsen C; Dudek J; Kohlhaas M; Nickel A; Lund L; Maack C; Végvári Á; Betsholtz C
Preprint: RESEARCH SQUARE. 2021
Ultralight ultrafast enzymes
Zhang X; Meng Z; Beusch C; Gharibi H; Cheng Q; Stefano L; Wang J; Saei A; Vegvari A; Gaetani M; Zubarev R
Preprint: RESEARCH SQUARE. 2021
Peripheral blood CD4+CCR6+ compartment differentiates HIV-1 infected or seropositive elite controllers from long-term successfully treated individuals
Akusjärvi SS; Krishnan S; Jütte B; Ambikan A; Gupta S; Rodriguez J; Vegvari A; Sperk M; Nowak P; Vesterbacka J; Svensson P; Sonnerborg A; Neogi U
Preprint: MEDRXIV. 2021
Trans Cohorts Metabolomic Modulation Following Long-Term Successful Therapy in HIV-Infection
Mikaeloff F; Svensson-Akusjärvi S; Ikomey GM; Krishnan S; Sperk M; Gupta S; Vega Magdaleno GD; Escós A; Lyonga E; Okomo MC; Tagne CT; Babu H; Lorson C; Végvári Á; Banerjea A; Kele J; Hanna LE; Singh K; de Magalhães JP; Benfeitas R; Neogi U
Preprint: RESEARCH SQUARE. 2021
Longitudinal blood cell transcriptomic profiling and in vitro temporal proteomics provides novel insights into metabolic reprogramming and host-immune responses against Crimean-Congo Hemorrhagic Fever Virus
Neogi U; Elaldi N; Appelberg S; Ambikan A; Kennedy E; Dowall S; Bagci B; Gupta S; Rodriguez J; Akusjärvi SS; Monteil V; Vegvari A; Banerjea A; Weber F; Hewson R; Mirazimi A
Preprint: BIORXIV. 2021
Single Cell Chemical Proteomics (SCCP) Interrogates the Timing and Heterogeneity of Cancer Cell Commitment to Death
Végvári Á; Rodriguez J; Zubarev R
Preprint: RESEARCH SQUARE. 2021
SIESTA as a universal unbiased proteomics approach for identification and prioritization of enzyme substrates
Saei AA; Beusch C; Sabatier P; Wells JA; Gharibi H; Meng Z; Chernobrovkin A; Rodin S; Näreoja K; Thorsell A-G; Karlberg T; Cheng Q; Lundström S; Gaetani M; Végvári Á; Arnér ESJ; Schüler H; Zubarev R
Preprint: BIORXIV. 2021
Cytotoxic lymphocytes target HIV-1 Gag through granzyme M-mediated cleavage
Saccon E; Mikaeloff F; Ivern PF; Végvári Á; Sönnerborg A; Neogi U; van Domselaar R
Preprint: BIORXIV. 2021
Implications of central carbon metabolism in SARS-CoV-2 replication and disease severity
Krishnan S; Nordqvist H; Ambikan AT; Gupta S; Sperk M; Svensson-Akusjärvi S; Mikaeloff F; Benfeitas R; Saccon E; Ponnan SM; Rodriguez JE; Nikouyan N; Odeh A; Ahlén G; Asghar M; Sällberg M; Vesterbacka J; Nowak P; Végvári Á; Sönnerborg A; Treutiger CJ; Neogi U
Preprint: BIORXIV. 2021
Type-I interferon signatures in SARS-CoV-2 infected Huh7 cells
Chen X; Saccon E; Appelberg KS; Mikaeloff F; Rodriguez JE; Vinhas BS; Frisan T; Végvári Á; Mirazimi A; Neogi U; Gupta S
Preprint: SSRN ELECTRONIC JOURNAL. 2021
Single Cell Chemical Proteomics (SCCP) Interrogates the Timing and Heterogeneity of Cancer Cell Commitment to Death
Végvári Á; Rodriguez JE; Zubarev R
Preprint: SSRN ELECTRONIC JOURNAL. 2021
Integrative Proteo-Transcriptomic and Immunophenotyping Signatures of HIV-1 Elite Control Phenotype: A Cross-Talk Between Glycolysis and HIF Signaling
Svensson-Akusjärvi S; Ambikan AT; Krishnan S; Gupta S; Sperk M; Végvári Á; Mikaeloff F; Healy K; Vesterbacka J; Nowak P; Sönnerborg A; Neogi U
Preprint: BIORXIV. 2020
Multi-omics insights into host-viral response and pathogenesis in Crimean-Congo Hemorrhagic Fever Viruses for novel therapeutic target
Neogi U; Elaldi N; Appelberg S; Ambikan A; Kennedy E; Dowall S; Bagci B; Gupta S; Rodriguez J; Svensson-Akusjärvi S; Monteil V; Végvári Á; Benfeitas R; Banerjea A; Weber F; Hewson R; Mirazimi A
Corrigendum: LEUKEMIA. 2020;34(12):3439
S100A6 is a critical regulator of hematopoietic stem cells (vol 53, pg 731, 2020)
Grahn THM; Niroula A; Vegvari A; Oburoglu L; Pertesi M; Warsi S; Safi F; Miharada N; Capellera-Garcia S; Siva K; Liu Y; Rorby E; Nilsson B; Zubarev RA; Karlsson S
Review: JOURNAL OF PROTEOME RESEARCH. 2020;19(11):4259-4274
Utility of Proteomics in Emerging and Re-Emerging Infectious Diseases Caused by RNA Viruses
Sperk M; van Domselaar R; Rodriguez JE; Mikaeloff F; Vinhas BS; Saccon E; Sonnerborg A; Singh K; Gupta S; Vegvari A; Neogi U
Conference publication: EUROPEAN HEART JOURNAL. 2020;41:919
An epigenetic circuit linking oxidative stress and DNA hydroxymethylation in heart failure
Elbeck Z; Hossain MB; Franzen O; Siga H; Karlsson F; Walentinsson A; Moosmang S; Milting H; Lund LH; Vegvari A; Knoll R
Preprint: BIORXIV. 2020
Tropism of SARS-CoV-2 in commonly used laboratory cell lines and their proteomic landscape during infection
Saccon E; Chen X; Mikaeloff F; Rodriguez JE; Szekely L; Vinhas BS; Krishnan S; Byrareddy SN; Frisan T; Végvári Á; Mirazimi A; Neogi U; Gupta S
Preprint: BIORXIV. 2020
Dysregulation in mTOR/HIF-1 signaling identified by proteo-transcriptomics of SARS-CoV-2 infected cells
Appelberg S; Gupta S; Ambikan A; Mikaeloff F; Végvári Á; Akusjärvi SS; Benfeitas R; Sperk M; Ståhlberg M; Krishnan S; Singh K; Penninger J; Mirazimi A; Neogi U
Review: EXPERT REVIEW OF PROTEOMICS. 2019;16(9):761-772
Current status of clinical proteogenomics in lung cancer
Nishimura T; Nakamura H; Vegvari A; Marko-Varga G; Furuya N; Saji H
Conference publication: CIRCULATION. 2019;140
Methylation, Mis-Splicing and Expression of Pathological Isoforms in a Disease Causing Csrp3/Mlp Mutation
ElBeck Z; Hossain MB; Koppenhofer D; Siga H; Li X; Azzimato V; Buyandelger B; Enesa KN; Milner R; Wiseman J; Bohlooly-Y M; Vegvari A; Knoll R
Preprint: BIORXIV. 2018
System-wide identification and prioritization of enzyme substrates by thermal analysis (SIESTA)
Saei AA; Beusch C; Sabatier P; Wells JA; Chernobrovkin A; Rodin S; Näreoja K; Thorsell A-G; Karlberg T; Cheng Q; Lundström S; Gaetani M; Végvári Á; Arnér ESJ; Schüler H; Zubarev R
Preprint: BIORXIV. 2018
ProTargetMiner: A proteome signature library of anticancer molecules for functional discovery
Saei AA; Chernobrovkin A; Sabatier P; Zhang B; Beusch C; Tokat ÜG; Gaetani M; Végvári Á; Zubarev R
Meeting abstract: CARDIOVASCULAR RESEARCH (CVR). 2018;114:S55-S56
Methylation, mis-splicing and expression of pathological isoforms in a disease causing Csrp3/Mlp mutation
Elbeck Z; Azzimato V; Buyandelger B; Li X; Wiseman JW; Bohlooly M; Vegvari A; Knoell R
Review: BIOANALYSIS. 2016;8(6):575-588
Novel insights in drug metabolism by MS imaging
Sugihara Y; Watanabe K-I; Vegvari A
Editorial comment: ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY. 2016;926:V-VI
Proteogenomics Preface
Vegvari A
Review: ARCHIVES OF PHARMACAL RESEARCH. 2015;38(9):1718-1727
Drug compound characterization by mass spectrometry imaging in cancer tissue
Kwon HJ; Kim Y; Sugihara Y; Baldetorp B; Welinder C; Watanabe K-I; Nishimura T; Malm J; Torok S; Doeme B; Vegvari A; Gustavsson L; Fehniger TE; Marko-Varga G
Review: CANCER AND METASTASIS REVIEWS. 2015;34(2):217-226
Association of chromosome 19 to lung cancer genotypes and phenotypes
Wang X; Zhang Y; Nilsson CL; Berven FS; Andren PE; Carlsohn E; Horvatovich P; Malm J; Fuentes M; Vegvari A; Welinder C; Fehniger TE; Rezeli M; Edula G; Hober S; Nishimura T; Marko-Varga G
Corrigendum: CANCER AND METASTASIS REVIEWS. 2015;34(2):227
Association of chromosome 19 to lung cancer genotypes and phenotypes (vol 34, pg 217, 2015)
Wang X; Zhang Y; Nilsson CL; Berven FS; Andren PE; Carlsohn E; Horvatovich P; Malm J; Fuentes M; Vegvari A; Welinder C; Fehniger TE; Rezeli M; Edula G; Hober S; Nishimura T; Marko-Varga G
Review: BIOMARKERS IN MEDICINE. 2015;9(9):869-876
Drug localizations in tissue by mass spectrometry imaging
Vegvari A
Meeting abstract: NEURO-ONCOLOGY. 2014;16:v202
THE ROLE OF SINGLE AMINO ACID POLYMORPHISMS IN GLIOMA STEM CELL PHENOTYPES
Nilsson CL; Vegvari A; Mostovenko E; Lichti CF; Fenyo D; Ruggles K; Sulman EP
Review: PROTEOMICS. 2014;14(17-18):1963-1970
A new look at drugs targeting malignant melanoma-An application for mass spectrometry imaging
Sugihara Y; Vegvari A; Welinder C; Jonsson G; Ingvar C; Lundgren L; Olsson H; Breslin T; Wieslander E; Laurell T; Rezeli M; Jansson B; Nishimura T; Fehniger TE; Baldetorp B; Marko-Varga G
Conference publication: INTERNATIONAL JOURNAL OF MOLECULAR MEDICINE. 2014;34:S84
Distribution of vemurafenib, a personalized medicine compound, in malignant melanoma tissue analyzed by MALDI mass spectrometry imaging
Sugihara Y; Vegvari A; Welinder C; Fehniger T; Marko-Varga G
Book chapter: GENOMICS AND PROTEOMICS FOR CLINICAL DISCOVERY AND DEVELOPMENT: TRANSLATIONAL BIOINFORMATICS. 2014;p. 7-18
Identification of Missing Proteins: Toward the Completion of Human Proteome
Végvári Á
Review: JOURNAL OF PROTEOMICS. 2013;95:38-45
Developments in biobanking workflow standardization providing sample integrity and stability
Malm J; Fehniger TE; Danmyr P; Vegvari A; Welinder C; Lindberg H; Appelqvist R; Sjodin K; Wieslander E; Laurell T; Hober S; Berven FS; Fenyoe D; Wang X; Andren PE; Edula G; Carlsohn E; Fuentes M; Nilsson CL; Dahlback M; Rezeli M; Erlinge D; Marko-Varga G
Review: BIOANALYSIS. 2013;5(21):2647-2659
Accessing microenvironment compartments in formalin-fixed paraffin-embedded tissues by protein expression analysis
Donnarumma F; Vegvari A; Rezeli M; Welinder C; Jansson B; Marko-Varga G
Book chapter: BIOINFORMATICS OF HUMAN PROTEOMICS: TRANSLATIONAL BIOINFORMATICS. 2013;p. 169-185
Clinical and Biomedical Mass Spectrometry: New Frontiers in Drug Developments and Diagnosis
Végvári Á; Rezeli M; Erlinge D; Marko-Varga G
Review: BIOANALYSIS. 2011;3(23):2665-2677
State-of-the-art MS technology applications in lung disease
Vegvari A; Doeme B
Review: CHEMICAL REVIEWS. 2010;110(5):3278-3298
Clinical Protein Science and Bioanalytical Mass Spectrometry with an Emphasis on Lung Cancer
Vegvari A; Marko-Varga G
Published conference paper: JOURNAL OF PROTEOMICS. 2010;73(6):1270-1278
Essential tactics of tissue preparation and matrix nano-spotting for successful compound imaging mass spectrometry
Vegvari A; Fehniger TE; Gustavsson L; Nilsson A; Andren PE; Kenne K; Nilsson J; Laurell T; Marko-Varga G
Published conference paper: JOURNAL OF PROTEOMICS. 2010;73(6):1219-1229
Isotope labeled internal standards (ILIS) as a basis for quality control in clinical studies using plasma samples
Rezeli M; Vegvari A; Marko-Varga G; Laurell T
Published conference paper: JOURNAL OF PROTEOMICS. 2010;73(6):1137-1147
Identification of prostate-specific antigen (PSA) isoforms in complex biological samples utilizing complementary platforms
Vegvari A; Rezeli M; Welinder C; Malm J; Lilja H; Marko-Varga G; Laurell T
Published conference paper: JOURNAL OF PROTEOMICS. 2010;73(6):1117-1132
Multiple sclerosis: Identification and clinical evaluation of novel CSF biomarkers
Ottervald J; Franzen B; Nilsson K; Andersson LI; Khademi M; Eriksson B; Kjellstrom S; Marko-Varga G; Vegvari A; Harris RA; Laurell T; Miliotis T; Matusevicius D; Salter H; Ferm M; Olsson T
Review: ELECTROPHORESIS. 2006;27(3):716-725
Theoretical and nomenclatural considerations of capillary electrochromatography with monolithic stationary phases
Végvári A; Guttman A
Review: JOURNAL OF CHROMATOGRAPHY A. 2005;1079(1-2):50-58
Homogeneous gels for capillary electrochromatography
Végvári A
Book chapter: PROTEOMICS AND PEPTIDOMICS: NEW TECHNOLOGY PLATFORMS ELUCIDATING BIOLOGY: COMPREHENSIVE ANALYTICAL CHEMISTRY. 2005;p. 449-485
Chapter 10 Technologies interfacing capillary electrophoresis to mass spectrometry
Végvári Á; Wetterhall M; Bergquist J
Book chapter: PROTEOMICS AND PEPTIDOMICS: NEW TECHNOLOGY PLATFORMS ELUCIDATING BIOLOGY: COMPREHENSIVE ANALYTICAL CHEMISTRY. 2005;p. 149-252
Chapter 3 Peptide and protein separations by capillary electrophoresis and electrochromatography
Végvári Á
Conference publication: THE FEBS JOURNAL. 2005;272:399
Universal method for synthesis of highly selective artificial gel antibodies against proteins, viruses and cells;: some techniques to study the selectivity and applications
Hjertén S; Ghasemzadeh N; Hjertén MC; Végvári A; Bacskay I; Kilár A; Rezeli M; Takátsy A; Kilár F; Ballagi A; Elfwing A; Cheng H; Sedzik J; Aastrup T; Anderson H
Book chapter: HANDBOOK OF ISOELECTRIC FOCUSING AND PROTEOMICS: SEPARATION SCIENCE AND TECHNOLOGY (NEW YORK). 2005;p. 13-39
2 Evolution and development of isoelectric focusing
Végvári Á; Kilár F
Published conference paper: JOURNAL OF CHROMATOGRAPHY A. 1998;813(2):349-360
New set-up for capillary isoelectric focusing in uncoated capillaries
Kilár F; Végvári A; Mód A
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Grants

COPD Sub-phenotypes: A Systems Medicine Framework for Investigating autoimmune components of Chronic Obstructive Pulmonary Disease (COPD)
Swedish Heart-Lung Foundation
1 January 2020 - 31 December 2022
A clinical trans-omics multidisciplinary study to understand the role of antiretroviral therapy in premature ageing of the immune system in HIV-infection
Swedish Research Council
1 December 2018 - 30 November 2023

Employments

Senior Research Infrastructure Specialist, Department of Medical Biochemistry and Biophysics, Karolinska Institutet, 2023-

Degrees and Education

Docent, Uppsala University, 2006

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