Gert Auer

Publications
CV
Public outreach and news

Articles

Article: CYTOPATHOLOGY. 2023;34(4):286-294
Multiplex protein analysis and ensemble machine learning methods of fine needle aspirates from prostate cancer patients reveal potential diagnostic signatures associated with tumour grade
Robeck P; Franzen B; Cantera-Ahlman R; Dragomir A; Auer G; Jorulf H; Jacobsson SP; Viktorsson K; Lewensohn R; Haggman M; Ladjevardi S
Article: JOURNAL OF NANOBIOTECHNOLOGY. 2022;20(1):292
Fast, streamlined fluorescence nanoscopy resolves rearrangements of SNARE and cargo proteins in platelets co-incubated with cancer cells
Bergstrand J; Miao X; Srambickal CV; Auer G; Widengren J
Article: SCIENTIFIC REPORTS. 2021;11(1):24446
SATB1, genomic instability and Gleason grading constitute a novel risk score for prostate cancer
Dumke C; Gemoll T; Oberlaender M; Freitag-Wolf S; Thorns C; Glaessgen A; Klooster R; van der Maarel SM; Widengren J; Doehn C; Auer G; Habermann JK
Article: BREAST CARE. 2021;16(5):523-531
PITX2 DNA-Methylation: Predictive versus Prognostic Value for Anthracycline-Based Chemotherapy in Triple-Negative Breast Cancer Patients
Napieralski R; Schricker G; Auer G; Aubele M; Perkins J; Magdolen V; Ulm K; Hamann M; Walch A; Weichert W; Kiechle M; Wilhelm OG
Article: GENOME MEDICINE. 2021;13(1):93
Hard wiring of normal tissue-specific chromosome-wide gene expression levels is an additional factor driving cancer type-specific aneuploidies
Patkar S; Heselmeyer-Haddad K; Auslander N; Hirsch D; Camps J; Bronder D; Brown M; Chen W-D; Lokanga R; Wangsa D; Wangsa D; Hu Y; Lischka A; Braun R; Emons G; Ghadimi BM; Gaedcke J; Grade M; Montagna C; Lazebnik Y; Difilippantonio MJ; Habermann JK; Auer G; Ruppin E; Ried T
Article: CLINICAL CANCER RESEARCH. 2020;26(17):4606-4615
Genome Instability Profiles Predict Disease Outcome in a Cohort of 4,003 Patients with Breast Cancer
Lischka A; Doberstein N; Freitag-Wolf S; Kocak A; Gemoll T; Heselmeyer-Haddad K; Ried T; Auer G; Habermann JK
Article: AMERICAN JOURNAL OF PATHOLOGY. 2020;190(8):1643-1656
High Levels of Chromosomal Copy Number for updates Alterations and TP53 Mutations Correlate with Poor Outcome in Younger Breast Cancer Patients
Kocak A; Heselmeyer-Haddad K; Lischka A; Hirsch D; Fiedler D; Hu Y; Doberstein N; Torres I; Chen W-D; Gertz EM; Schaffer AA; Freitag-Wolf S; Kirfel J; Auer G; Habermann JK; Ried T
Article: NANOSCALE. 2019;11(20):10023-10033
Super-resolution microscopy can identify specific protein distribution patterns in platelets incubated with cancer cells
Bergstrand J; Xu L; Miao X; Li N; Oktem O; Franzen B; Auer G; Lomnytska M; Widengren J
Article: MOLECULAR ONCOLOGY. 2019;13(2):376-391
Protein profiling of fine-needle aspirates reveals subtype-associated immune signatures and involvement of chemokines in breast cancer
Franzen B; Alexeyenko A; Kamali-Moghaddam M; Hatschek T; Kanter L; Ramqvist T; Kierkegaard J; Masucci G; Auer G; Landegren U; Lewensohn R
Article: MOLECULAR ONCOLOGY. 2018;12(9):1415-1428
A fine-needle aspiration-based protein signature discriminates benign from malignant breast lesions
Franzen B; Kamali-Moghaddam M; Alexeyenko A; Hatschek T; Becker S; Wik L; Kierkegaard J; Eriksson A; Muppani NR; Auer G; Landegren U; Lewensohn R
Article: GENES CHROMOSOMES & CANCER. 2018;57(4):165-175
Aneuploidy, TP53 mutation, and amplification of MYC correlate with increased intratumor heterogeneity and poor prognosis of breast cancer patients
Oltmann J; Heselmeyer-Haddad K; Hernandez LS; Meyer R; Torres I; Hu Y; Doberstein N; Killian JK; Petersen D; Zhu YJ; Edelman DC; Meltzer PS; Schwartz R; Gertz EM; Schaffer AA; Auer G; Habermann JK; Ried T
Article: BIOMARKER RESEARCH. 2018;6:2
Platelet protein biomarker panel for ovarian cancer diagnosis
Lomnytska M; Pinto R; Becker S; Engstrom U; Gustafsson S; Bjorklund C; Templin M; Bergstrand J; Xu L; Widengren J; Epstein E; Franzen B; Auer G
Article: CELLULAR AND MOLECULAR LIFE SCIENCES. 2018;75(2):323-334
Protein levels of clusterin and glutathione synthetase in platelets allow for early detection of colorectal cancer
Strohkamp S; Gemoll T; Humborg S; Hartwig S; Lehr S; Freitag-Wolf S; Becker S; Franzen B; Pries R; Wollenberg B; Roblick UJ; Bruch H-P; Keck T; Auer G; Habermann JK
Article: CANCER CYTOPATHOLOGY. 2017;125(10):748-756
Core-Needle Biopsy of Breast Cancer Is Associated With a Higher Rate of Distant Metastases 5 to 15 Years After Diagnosis Than FNA Biopsy
Sennerstam RB; Franzen BSH; Wiksell HOT; Auer GU
Article: SCIENTIFIC REPORTS. 2017;7(1):67
Patterns of acute inflammatory symptoms prior to cancer diagnosis
Setiawan A; Yin L; Auer G; Czene K; Smedby KE; Pawitan Y
Article: PHYSICA MEDICA-EUROPEAN JOURNAL OF MEDICAL PHYSICS. 2016;32(5):724-727
A new method to gently place biopsy needles or treatment electrodes into tissues with high target precision
Wiksell H; Lofgren L; Schassburger K-U; Leifland K; Thorneman K; Auer G
Article: INTERNATIONAL JOURNAL OF CANCER. 2016;138(1):98-109
Phylogenetic analysis of multiple FISH markers in oral tongue squamous cell carcinoma suggests that a diverse distribution of copy number changes is associated with poor prognosis
Wangsa D; Chowdhury SA; Ryott M; Gertz EM; Elmberger G; Auer G; Lundqvist EA; Kueffer S; Stroebel P; Schaeffer AA; Schwartz R; Munck-Wikland E; Ried T; Heselmeyer-Haddad K
Article: ANNALS OF DIAGNOSTIC PATHOLOGY. 2015;19(4):243-248
A standardized method for quantifying proliferation by Ki-67 and cyclin A immunohistochemistry in breast cancer
Mu K; Li L; Yang Q; Yun H; Kharaziha P; Ye D-W; Auer G; Lagercrantz SB; Zetterberg A
Article: EUROPEAN JOURNAL OF CANCER. 2015;51(6):751-757
Distinct effects of anti-inflammatory and anti-thrombotic drugs on cancer characteristics at diagnosis
Pawitan Y; Yin L; Setiawan A; Auer G; Smedby KE; Czene K
Article: INTERNATIONAL JOURNAL OF CANCER. 2014;135(1):238-241
Anticoagulant medication at time of needle biopsy for breast cancer in relation to risk of lymph node metastasis
Ljung R; Sennerstam R; Mattsson F; Auer G; Lagergren J
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All other publications

Review: MOLECULAR ONCOLOGY. 2024;18(11):2612-2628
Minimally invasive biopsy-based diagnostics in support of precision cancer medicine
Franzen B; Auer G; Lewensohn R
Review: RECENT RESULTS IN CANCER RESEARCH. 2015;200:81-94
Genetic Instability and Disease Prognostication.
Gemoll T; Auer G; Ried T; Habermann JK
Review: BRITISH JOURNAL OF CANCER. 2009;100(8):1303-1314
Differential tissue-specific protein markers of vaginal carcinoma
Hellman K; Alaiya AA; Becker S; Lomnytska M; Schedvins K; Steinberg W; Hellstrom A-C; Andersson S; Hellman U; Auer G
Review: PROTEOMICS CLINICAL APPLICATIONS. 2007;1(9):1058-1065
Proteomics in clinical prostate research
Hellstrom M; Jonmarker S; Lehtio J; Auer G; Egevad L
Published conference paper: ONCOLOGY REPORTS. 2006;16(3):443-449
Prognostic significance of Cyclin A in epidermoid anal cancer
Nilsson PJ; Lenander C; Rubio C; Auer G; Ljungqvist O; Glimelius B
Meeting abstract: EUROPEAN JOURNAL OF CANCER, SUPPLEMENT. 2006;4(6):52
Gene expression signature of colorectal carcinogenesis
Habermann JK; Paulsen U; Roblick U; Upender MB; McShane L; Korn EL; Wangsa D; Duchrow M; Krueger S; Bruch H-P; Auer G; Ried T
Editorial: BJS-BRITISH JOURNAL OF SURGERY. 2005;92(12):1464-1465
Proteomics and clinical surgery
Roblick UJ; Auer G
Published conference paper: PROTEOMICS. 2005;5(10):2570-2576
Differential protein expression in anatomical zones of the prostate
Lexander H; Franzén B; Hirschberg D; Becker S; Hellström M; Bergman T; Jörnvall H; Auer G; Egevad L
Published conference paper: ANNALS OF ONCOLOGY. 2005;16(6):893-898
Tumour budding detected by laminin-5 γ2-chain immunohistochemistry is of prognostic value in epidermoid anal cancer
Nilsson PJ; Rubio C; Lenander C; Auer G; Glimelius B
Review: JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES. 2003;787(1):207-222
Protein expression profiling in human lung, breast, bladder, renal, colorectal and ovarian cancers
Alaiya AA; Roblick UJ; Franzén B; Bruch HP; Auer G
Published conference paper: ELECTROPHORESIS. 2000;21(13):2737-2743
Inhibition of extracellular signal-regulated kinase1/2 activity of the breast cancer cell line MDA-MB-231 leads to major alterations in the pattern of protein expression
Seddighzadeh M; Linder S; Shoshan MC; Auer G; Alaiya AA
Review: ELECTROPHORESIS. 2000;21(6):1210-1217
Cancer proteomics: From identification of novel markers to creation of artificial learning models for tumor classification
Alaiya AA; Franzén B; Auer G; Linder S
Review: GENES CHROMOSOMES & CANCER. 1999;25(3):195-204
Genomic changes defining the genesis, progression, and malignancy potential in solid human tumors:: A phenotype genotype correlation
Ried T; Heselmeyer-Haddad K; Blegen H; Schröck E; Auer G
Review: CELLULAR ONCOLOGY. 1999;19(1):3-6
Interphase cytogenetics: At the interface of genetics and morphology
Ghadimi BM; Heselmeyer-Haddad K; Auer G; Ried T
Published conference paper: ELECTROPHORESIS. 1999;20(4-5):1039-1046
Two-dimensional gel analysis of protein expression in ovarian tumors shows a low degree of intratumoral heterogeneity
Alaiya AA; Franzén B; Moberger B; Silfverswärd C; Linder S; Auer G
Review: JOURNAL OF MOLECULAR MEDICINE-JMM. 1997;75(11-12):801-814
Tumor cytogenetics revisited: comparative genomic hybridization and spectral karyotyping
Ried T; Liyanage M; duManoir S; Heselmeyer K; Auer G; Macville M; Schrock E
Published conference paper: ARCHIVES OF GYNECOLOGY AND OBSTETRICS. 1997;260(1-4):388-389
Cell diagnosis of breast disorders
Auer G
Published conference paper: ELECTROPHORESIS. 1997;18(3-4):582-587
Analysis of polypeptide expression in benign and malignant human breast lesions
Franzen B; Linder S; Alaiya AA; Eriksson E; Fujioka K; Bergman AC; Jornvall H; Auer G
Published conference paper: HEAD AND NECK-JOURNAL FOR THE SCIENCES AND SPECIALTIES OF THE HEAD AND NECK. 1997;19(2):107-115
p53 immunostaining and image cytometry DNA analysis in precancerous and cancerous squamous epithelial lesions of the larynx
MunckWikland E; Kuylenstierna R; Lindholm J; Auer G
Published conference paper: ELECTROPHORESIS. 1995;16(7):1087-1089
SAMPLE PREPARATION OF HUMAN TUMORS PRIOR TO 2-DIMENSIONAL ELECTROPHORESIS OF PROTEINS
FRANZEN B; HIRANO T; OKUZAWA K; URYU K; ALAIYA AA; LINDER S; AUER G

Employments

Professor Emeritus, Department of Oncology-Pathology, Karolinska Institutet, 2025-2027
Professor/Senior Physician, Department of Oncology-Pathology, Karolinska Institutet, 1999-2002
Professor, Assistant/Senior Doctor, Department of Oncology-Pathology, Karolinska Institutet, 1996-1998

Degrees and Education

Docent, 1973

Articles

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