Björn Andersson

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About me

Professor of Genome Analysis

Articles

Article: BRITISH JOURNAL OF DERMATOLOGY. 2024;:ljae471
Taxonomic and functional profiling of skin microbiome in psoriasis.
Sinkko H; Olah P; Yang Y; Maia G; Barrientos-Somarribas M; Rádai Z; Mäenpää K; Sorratto T; Salava A; Lauerma A; Barker J; Ranki A; Homey B; Andersson B; Fyhrquist N; Alenius H; MAARS consortium
Journal article: JOURNAL OF INVESTIGATIVE DERMATOLOGY. 2024;144(12):s279
292 Data-driven modeling of cutaneous ecosystems in homeostasis and inflammation
Olah P; Radai Z; Smits J; Gomez-Casado C; Consortium E; Sinkko H; Fyhrquist N; Andersson B; Alenius H; Homey B
Article: JOURNAL OF CLINICAL VIROLOGY. 2024;175:105736
Metagenomic characterization of viruses in the serum of children with newly diagnosed cancer.
Leijonhufvud G; Soratto TAT; Matos GM; Bajalan A; Eichler-Jonsson C; Gustafsson B; Bogdanovic G; Allander T; Ljungman G; Andersson B
Journal article: BLOOD. 2024;144(Supplement 1):5932
Virus Detection in Newly Diagnosed Pediatric Acute Lymphoblastic Leukemia
Leijonhufvud G; Machado G; Ljungman G; Bogdanovic G; Allander T; Andersson B; Gustafsson B
Article: CANCER SCIENCE. 2024;115(10):3439-3454
Multiplex plasma protein assays as a diagnostic tool for lung cancer
Ahamed MT; Forshed J; Levitsky A; Lehtio J; Bajalan A; Pernemalm M; Eriksson LE; Andersson B
Article: EBIOMEDICINE. 2024;105:105222
Exploratory multi-omics analysis reveals host-microbe interactions associated with disease severity in psoriatic skin
Yang Y; Olah P; Radai Z; Maia G; Salava A; Salo V; Barker J; Lauerma A; Andersson B; Homey B; Fyhrquist N; Alenius H
Article: SCIENTIFIC REPORTS. 2024;13(1):22125
Metagenomic analysis of Mesolithic chewed pitch reveals poor oral health among stone age individuals
Kirdok E; Kashuba N; Damlien H; Manninen MA; Nordqvist B; Kjellstrom A; Jakobsson M; Lindberg AM; Stora J; Persson P; Andersson B; Aravena A; Goetherstrom A
Article: PLOS ONE. 2024;19(12):e0310821
Genetic coping mechanisms observed in Leishmania tropica, from the Middle East region, enhance the survival of the parasite after drug exposure.
Glans H; Matos GM; Bradley M; Downing T; Andersson B
Article: PLOS NEGLECTED TROPICAL DISEASES. 2024;18(1):e0011920
Comparative genomics of Leishmania donovani progeny from genetic crosses in two sand fly species and impact on the diversity of diagnostic and vaccine candidates
Sadlova J; Yeo M; Mateus DS; Phelan J; Hai LA; Bhattacharyya T; Kurtev S; Sebesta O; Myskova J; Seblova V; Andersson B; Florez de Sessions P; Volf P; Miles MA
Article: SCIENTIFIC REPORTS. 2023;13(1):18423
Starvation induces changes in abundance and small RNA cargo of extracellular vesicles released from Plasmodium falciparum infected red blood cells
Vetter L; Bajalan A; Ahamed MT; Scasso C; Shafeeq S; Andersson B; Ribacke U
Article: GENOME RESEARCH. 2023;33(8):1299-1316
Historical RNA expression profiles from the extinct Tasmanian tiger
Marmol-Sanchez E; Fromm B; Oskolkov N; Pochon Z; Kalogeropoulos P; Eriksson E; Biryukova I; Sekar V; Ersmark E; Andersson B; Dalen L; Friedlander MR
Journal article: JOURNAL OF INVESTIGATIVE DERMATOLOGY. 2023;143(5):s178
1038 Host transcriptomes that define microbiota during cutaneous homeostasis and inflammation
Olah P; Radai Z; Smits JP; Gomez-Casado C; Consortium EM; Sinkko H; Fyhrquist N; Andersson B; Alenius H; Homey B
Article: JOURNAL OF COSMETIC DERMATOLOGY. 2022;21(11):6233-6242
Clinical and metagenomic profiling of hormonal acne-prone skin in different populations
Hrapovic N; Richard T; Messaraa C; Li X; Abbaspour A; Fabre S; Mavon A; Andersson B; Khmaladze I
Article: INTERNATIONAL JOURNAL OF INFECTIOUS DISEASES. 2022;122:375-381
Treatment outcome of imported cutaneous leishmaniasis among travelers and migrants infected with Leishmania major and Leishmania tropica: a retrospective study in European centers 2013 to 2019
Glans H; Dotevall L; Van der Auwera G; Bart A; Blum J; Buffet P; Guery R; Gangneux J-P; van Henten S; Harms G; Varani S; Robert-Gangneux F; Rongisch R; Andersson B; Bradley M
Article: JOURNAL OF DIABETES RESEARCH. 2022;2022:3975147-10
Expression of Transient Receptor Potential Channel Genes and Their Isoforms in Alpha-Cells and Beta-Cells of Human Islets of Langerhans
Matos GM; Andersson B; Islam MS
Article: JOURNAL OF DERMATOLOGICAL SCIENCE. 2022;106(3):132-140
Influence of FLG loss-of-function mutations in host-microbe interactions during atopic skin inflammation
Olah P; Szlavicz E; Kuchner M; Nemmer J; Zeeuwen P; Lefevre-Utile A; Fyhrquist N; Prast-Nielsen S; Skoog T; Serra A; Rodriguez E; Raap U; Meller S; Gyulai R; Hupe P; Kere J; Levi-Schaffer F; Tsoka S; Alexander H; Nestle FO; Schroeder JM; Weidinger S; van den Bogaard E; Soumelis V; Greco D; Barker J; Lauerma A; Ranki A; Andersson B; Alenius H; Homey B
Article: ELIFE. 2022;11:e75237
Microevolution of Trypanosoma cruzi reveals hybridization and clonal mechanisms driving rapid genome diversification
Matos GM; Lewis MD; Talavera-Lopez C; Yeo M; Grisard EC; Messenger LA; Miles M; Andersson B
Article: ALLERGY. EUROPEAN JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY. 2022;77(5):1486-1498
Transcriptome-based identification of novel endotypes in adult atopic dermatitis
Lefevre-Utile A; Saichi M; Olah P; Delord M; Homey B; Soumelis V
Article: JOURNAL OF MEDICAL VIROLOGY. 2022;94(2):634-641
Better detection of Torque teno virus in children with leukemia by metagenomic sequencing than by quantitative PCR
Leijonhufvud G; Bajalan A; Teixeira Soratto TA; Gustafsson B; Bogdanovic G; Bjerkner A; Allander T; Ljungman G; Andersson B
Article: PLOS GENETICS. 2022;18(2):e1010019
Population genomics and geographic dispersal in Chagas disease vectors: Landscape drivers and evidence of possible adaptation to the domestic setting
Hernandez-Castro LE; Villacis AG; Jacobs A; Cheaib B; Day CC; Ocana-Mayorga S; Yumiseva CA; Bacigalupo A; Andersson B; Matthews L; Landguth EL; Costales JA; Llewellyn MS; Grijalva MJ
Article: PLOS NEGLECTED TROPICAL DISEASES. 2021;15(12):e0010110
High genome plasticity and frequent genetic exchange in Leishmania tropica isolates from Afghanistan, Iran and Syria
Glans H; Lind Karlberg M; Advani R; Bradley M; Alm E; Andersson B; Downing T
Article: EXPERIMENTAL PARASITOLOGY. 2021;230:108159
Differential expression and activity of arginine kinase between the American trypanosomatids Trypanosoma rangeli and Trypanosoma cruzi
Mansur Pontes CL; de Moraes MH; Luckemeyer DD; Wagner G; Andersson B; Stoco PH; Grisard EC
Article: JID INNOVATIONS. 2021;1(2):100008
Skin Microbiota and Clinical Associations in Netherton Syndrome.
Sillanpää V; Soratto TAT; Eränkö E; Barrientos-Somarribas M; Hannula-Jouppi K; Andersson B; Ranki A
Article: CELL REPORTS. 2021;35(8):109174
Divergent clonal differentiation trajectories establish CD8⁺ memory T cell heterogeneity during acute viral infections in humans
Mold JE; Modolo L; Hard J; Zamboni M; Larsson AJM; Stenudd M; Eriksson C-J; Durif G; Stahl PL; Borgstrom E; Picelli S; Reinius B; Sandberg R; Reu P; Talavera-Lopez C; Andersson B; Blom K; Sandberg JK; Picard F; Michaelsson J; Frisen J
Article: ALLERGY. EUROPEAN JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY. 2021;76(4):1173-1187
Microbial and transcriptional differences elucidate atopic dermatitis heterogeneity across skin sites
Ottman N; Barrientos-Somarribas M; Fyhrquist N; Alexander H; Wisgrill L; Olah P; Tsoka S; Greco D; Levi-Schaffer F; Soumelis V; Schroeder JM; Kere J; Nestle FO; Barker J; Ranki A; Lauerma A; Homey B; Andersson B; Alenius H
Article: COMMUNICATIONS BIOLOGY. 2021;4(1):139
Colonization and genetic diversification processes of Leishmania infantum in the Americas
Schwabl P; Boite MC; Bussotti G; Jacobs A; Andersson B; Moreira O; Freitas-Mesquita AL; Meyer-Fernandes JR; Telleria EL; Traub-Cseko Y; Vaselek S; Lestinova T; Volf P; Morgado FN; Porrozzi R; Llewellyn M; Spath GF; Cupolillo E
Article: FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY. 2021;11:614665
Repeat-Driven Generation of Antigenic Diversity in a Major Human Pathogen, Trypanosoma cruzi
Talavera-Lopez C; Messenger LA; Lewis MD; Yeo M; Reis-Cunha JL; Matos GM; Bartholomeu DC; Calzada JE; Saldana A; Ramirez JD; Guhl F; Ocana-Mayorga S; Costales JA; Gorchakov R; Jones K; Nolan MS; Teixeira SMR; Carrasco HJ; Bottazzi ME; Hotez PJ; Murray KO; Grijalva MJ; Burleigh B; Grisard EC; Miles MA; Andersson B
Article: MICROBIOLOGY RESOURCE ANNOUNCEMENTS. 2020;9(35):e00934-e00920
Four SARS-CoV-2 Genome Sequences from Late April in Stockholm, Sweden, Reveal a Rare Mutation in the Spike Protein
Soratto TAT; Darban H; Bjerkner A; Coorens M; Albert J; Allander T; Andersson B
Article: ELIFE. 2020;9:e59733
Activation of a neural stem cell transcriptional program in parenchymal astrocytes
Magnusson JP; Zamboni M; Santopolo G; Mold JE; Barrientos-Somarribas M; Talavera-Lopez C; Andersson B; Frisen J
Article: ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY. 2020;1131:271-279
Expression of the Inositol 1,4,5-Trisphosphate Receptor and the Ryanodine Receptor Ca²⁺-Release Channels in the Beta-Cells and Alpha-Cells of the Human Islets of Langerhans
Nordenskjold F; Andersson B; Islam MS
Article: NATURE COMMUNICATIONS. 2019;10(1):4703
Microbe-host interplay in atopic dermatitis and psoriasis
Fyhrquist N; Muirhead G; Prast-Nielsen S; Jeanmougin M; Olah P; Skoog T; Jules-Clement G; Feld M; Barrientos-Somarribas M; Sinkko H; van den Bogaard EH; Zeeuwen PLJM; Rikken G; Schalkwijk J; Niehues H; Daeubener W; Eller SK; Alexander H; Pennino D; Suomela S; Tessas I; Lybeck E; Baran AM; Darban H; Gangwar RS; Gerstel U; Jahn K; Karisola P; Yan L; Hansmann B; Katayama S; Meller S; Bylesjo M; Hupe P; Levi-Schaffer F; Greco D; Ranki A; Schroeder JM; Barker J; Kere J; Tsoka S; Lauerma A; Soumelis V; Nestle FO; Homeyl B; Andersson B; Alenius H
Article: NATURE COMMUNICATIONS. 2019;10(1):3972
Meiotic sex in Chagas disease parasite Trypanosoma cruzi
Schwabl P; Imamura H; Van den Broeck F; Costales JA; Maiguashca-Sanchez J; Miles MA; Andersson B; Grijalva MJ; Llewellyn MS
Article: PLOS NEGLECTED TROPICAL DISEASES. 2019;13(5):e0007353
Refining wet lab experiments with in silico searches: A rational quest for diagnostic peptides in visceral leishmaniasis
Hinckel BCB; Marlais T; Airs S; Bhattacharyya T; Imamura H; Dujardin J-C; El-Safi S; Singh OP; Sundar S; Keith Falconar A; Andersson B; Litvinov S; Miles MA; Mertens P
Article: JOURNAL OF PARASITOLOGY RESEARCH. 2019;2019:6594212-11
Characterization of Evolutionarily Conserved Trypanosoma cruzi NatC and NatA-N-Terminal Acetyltransferase Complexes.
Ochaya S; Franzén O; Buhwa DA; Foyn H; Butler CE; Stove SI; Tyler KM; Arnesen T; Matovu E; Åslund L; Andersson B
Article: NPJ BIOFILMS AND MICROBIOMES. 2019;5(1):5
The ketogenic diet influences taxonomic and functional composition of the gut microbiota in children with severe epilepsy
Lindefeldt M; Eng A; Darban H; Bjerkner A; Zetterstrom CK; Allander T; Andersson B; Borenstein E; Dahlin M; Prast-Nielsen S
Article: JOURNAL OF CLINICAL VIROLOGY. 2018;108:112-120
Virome definition in cerebrospinal fluid of patients with neurological complications after hematopoietic stem cell transplantation
Pau C; Barrientos-Somarribas M; Marin-Juan S; Bogdanovic G; Bjerkner A; Allander T; Gustafsson B; Andersson B
Article: SCIENTIFIC REPORTS. 2018;8(1):28
Discovering viral genomes in human metagenomic data by predicting unknown protein families
Barrientos-Somarribas M; Messina DN; Pou C; Lysholm F; Bjerkner A; Allander T; Andersson B; Sonnhammer ELL
Article: NATURE COMMUNICATIONS. 2017;8(1):2286
Reading and editing the Pleurodeles waltl genome reveals novel features of tetrapod regeneration
Elewa A; Wang H; Talavera-Lopez C; Joven A; Brito G; Kumar A; Hameed LS; Penrad-Mobayed M; Yao Z; Zamani N; Abbas Y; Abdullayev I; Sandberg R; Grabherr M; Andersson B; Simon A
Article: PLOS NEGLECTED TROPICAL DISEASES. 2017;11(7):e0005710
2b-RAD genotyping for population genomic studies of Chagas disease vectors: Rhodnius ecuadoriensis in Ecuador
Hernandez-Castro LE; Paterno M; Villacis AG; Andersson B; Costales JA; De Noia M; Ocana-Mayorga S; Yumiseva CA; Grijalva MJ; Llewellyn MS
Article: PLOS NEGLECTED TROPICAL DISEASES. 2017;11(4):e0005463
Parasite genomics-Time to think bigger
Talavera-Lopez C; Andersson B
Article: BRITISH JOURNAL OF CANCER. 2016;115(8):1008-1014
Virome characterisation from Guthrie cards in children who later developed acute lymphoblastic leukaemia
Bogdanovic G; Pou C; Barrientos-Somarribas M; Bjerkner A; Honkaniemi E; Allander T; Andersson B; Gustafsson B
Article: EVOLUTIONARY BIOINFORMATICS. 2016;12:263-275
A Comparative In Silico Study of the Antioxidant Defense Gene Repertoire of Distinct Lifestyle Trypanosomatid Species
Beltrame-Botelho IT; Talavera-Lopez C; Andersson B; Grisard EC; Stoco PH
Article: PLOS ONE. 2016;11(10):e0164548
The Transcriptome of Rhabdomyosarcoma Cells Infected with Cytolytic and Non-Cytolytic Variants of Coxsackievirus B2 Ohio-1
Savneby A; Luthman J; Nordenskjold F; Andersson B; Lindberg AM
Journal article: OPEN PARASITOLOGY JOURNAL. 2016;2:e18
Overexpression of Trypanosoma rangeli trypanothione reductase increases parasite survival under oxidative stress
BELTRAME-BOTELHO IT; STOCO PH; STEINDEL M; ANDERSSON B; PELOSO EF; GADELHA FR; GRISARD EC
Journal article: JOURNAL OF ENDOCRINOLOGICAL INVESTIGATION. 2015;38(12):1309-1317
Seasonal variations in vitamin D in relation to growth in short prepubertal children before and during first year growth hormone treatment.
Andersson B; Swolin-Eide D; Kriström B; Gelander L; Magnusson P; Albertsson-Wikland K
Article: BMC GENOMICS. 2015;16(1):697
Comparative genomic analyses of freshly isolated Giardia intestinalis assemblage A isolates
Ankarklev J; Franzen O; Peirasmaki D; Jerlstrom-Hultqvist J; Lebbad M; Andersson J; Andersson B; Svard SG
Article: BMC GENOMICS. 2015;16(1):499
Chromosomal copy number variation reveals differential levels of genomic plasticity in distinct Trypanosoma cruzi strains
Reis-Cunha JL; Rodrigues-Luiz GF; Valdivia HO; Baptista RP; Mendes TAO; de Morais GL; Guedes R; Macedo AM; Bern C; Gilman RH; Lopez CT; Andersson B; Vasconcelos AT; Bartholomeu DC
Article: PLOS NEGLECTED TROPICAL DISEASES. 2014;8(9):e3176
Genome of the Avirulent Human-Infective Trypanosome-Trypanosoma rangeli
Stoco PH; Wagner G; Talavera-Lopez C; Gerber A; Zaha A; Thompson CE; Bartholomeu DC; Lueckemeyer DD; Bahia D; Loreto E; Prestes EB; Lima FM; Rodrigues-Luiz G; Adolfo Vallejo G; da Silveira Filho JF; Schenkman S; Monteiro KM; Tyler KM; Paula de Almeida LG; Ortiz MF; Chiurillo MA; de Moraes MH; Cunha ODL; Mendonca-Neto R; Silva R; Ribeiro Teixeira SM; Fonseca Murta SM; Marques Sincero TC; de Oliveira Mendes TA; Urmenyi TP; Silva VG; DaRocha WD; Andersson B; Romanha AJ; Steindel M; Ribeiro de Vasconcelos AT; Grisard EC
Article: JOURNAL OF INFECTIOUS DISEASES. 2014;209(3):377-388
Intraclonal Variations Among Streptococcus pneumoniae Isolates Influence the Likelihood of Invasive Disease in Children
Browall S; Norman M; Tangrot J; Galanis I; Sjostrom K; Dagerhamn J; Hellberg C; Pathak A; Spadafina T; Sandgren A; Battig P; Franzen O; Andersson B; Ortqvist A; Normark S; Henriques-Normark B
Article: MICROBIOLOGY RESOURCE ANNOUNCEMENTS. 2014;2(1):e01114-e01113
Trypanosoma cruzi Clone Dm28c Draft Genome Sequence.
Grisard EC; Teixeira SMR; de Almeida LGP; Stoco PH; Gerber AL; Talavera-López C; Lima OC; Andersson B; de Vasconcelos ATR
Article: NATURE. 2013;497(7451):579-584
The Norway spruce genome sequence and conifer genome evolution
Nystedt B; Street NR; Wetterbom A; Zuccolo A; Lin Y-C; Scofield DG; Vezzi F; Delhomme N; Giacomello S; Alexeyenko A; Vicedomini R; Sahlin K; Sherwood E; Elfstrand M; Gramzow L; Holmberg K; Hallman J; Keech O; Klasson L; Koriabine M; Kucukoglu M; Kaller M; Luthman J; Lysholm F; Niittyla T; Olson A; Rilakovic N; Ritland C; Rossello JA; Sena J; Svensson T; Talavera-Lopez C; Theissen G; Tuominen H; Vanneste K; Wu Z-Q; Zhang B; Zerbe P; Arvestad L; Bhalerao R; Bohlmann J; Bousquet J; Gil RG; Hvidsten TR; de Jong P; MacKay J; Morgante M; Ritland K; Sundberg B; Thompson SL; Van de Peer Y; Andersson B; Nilsson O; Ingvarsson PK; Lundeberg J; Jansson S
Article: PLOS ONE. 2013;8(7):e70388
PCR-Induced Transitions Are the Major Source of Error in Cleaned Ultra-Deep Pyrosequencing Data
Brodin J; Mild M; Hedskog C; Sherwood E; Leitner T; Andersson B; Albert J
Article: PLOS COMPUTATIONAL BIOLOGY. 2013;9(3):e1003000
Transcriptome Profiling of Giardia intestinalis Using Strand-specific RNA-Seq
Franzen O; Jerlstrom-Hultqvist J; Einarsson E; Ankarklev J; Ferella M; Andersson B; Svard SG
Article: BMC GENOMICS. 2012;13:531
Comparative genomic analysis of human infective Trypanosoma cruzi lineages with the bat-restricted subspecies T. cruzi marinkellei
Franzen O; Talavera-Lopez C; Ochaya S; Butler CE; Messenger LA; Lewis MD; Llewellyn MS; Marinkelle CJ; Tyler KM; Miles MA; Andersson B
Article: PLOS NEGLECTED TROPICAL DISEASES. 2012;6(4):e1584
Multiple Mitochondrial Introgression Events and Heteroplasmy in Trypanosoma cruzi Revealed by Maxicircle MLST and Next Generation Sequencing
Messenger LA; Llewellyn MS; Bhattacharyya T; Franzen O; Lewis MD; David Ramirez J; Carrasco HJ; Andersson B; Miles MA
Article: PLOS ONE. 2012;7(2):e30875
Characterization of the Viral Microbiome in Patients with Severe Lower Respiratory Tract Infections, Using Metagenomic Sequencing
Lysholm F; Wetterbom A; Lindau C; Darban H; Bjerkner A; Fahlander K; Lindberg AM; Persson B; Allander T; Andersson B
Article: BMC RESEARCH NOTES. 2011;4:449
An efficient simulator of 454 data using configurable statistical models.
Lysholm F; Andersson B; Persson B
Article: PLOS NEGLECTED TROPICAL DISEASES. 2011;5(8):e1283
The Short Non-Coding Transcriptome of the Protozoan Parasite Trypanosoma cruzi
Franzen O; Arner E; Ferella M; Nilsson D; Respuela P; Carninci P; Hayashizaki Y; Aslund L; Andersson B; Daub CO
Article: BMC BIOINFORMATICS. 2011;12:293
FAAST: Flow-space Assisted Alignment Search Tool
Lysholm F; Andersson B; Persson B
Article: RESEARCH IN MICROBIOLOGY. 2011;162(6):619-625
The Trypanosoma cruzi genome; conserved core genes and extremely variable surface molecule families
Andersson B
Article: PLOS NEGLECTED TROPICAL DISEASES. 2011;5(3):e984
Shotgun Sequencing Analysis of Trypanosoma cruzi I Sylvio X10/1 and Comparison with T. cruzi VI CL Brener
Franzen O; Ochaya S; Sherwood E; Lewis MD; Llewellyn MS; Miles MA; Andersson B
Article: BMC MICROBIOLOGY. 2011;11:2
An unbiased metagenomic search for infectious agents using monozygotic twins discordant for chronic fatigue
Sullivan PF; Allander T; Lysholm F; Goh S; Persson B; Jacks A; Evengard B; Pedersen NL; Andersson B
Article: PLOS NEGLECTED TROPICAL DISEASES. 2010;4(12):e919
Analyses of an Expressed Sequence Tag Library from Taenia solium, Cysticerca
Lundstrom J; Salazar-Anton F; Sherwood E; Andersson B; Lindh J
Journal article: INTERNATIONAL JOURNAL OF MOLECULAR EPIDEMIOLOGY AND GENETICS. 2010;1(1):47-52
Evaluation of neprilysin sequence variation in relation to CSF β-Amyloid levels and Alzheimer disease risk.
Blomqvist ME; McCarthy S; Blennow K; Andersson B; Prince JA
Article: BMC GENOMICS. 2010;11:543
Genome analysis and comparative genomics of a Giardia intestinalis assemblage E isolate
Jerlstrom-Hultqvist J; Franzen O; Ankarklev J; Xu F; Nohynkova E; Andersson JO; Svard SG; Andersson B
Article: PLOS ONE. 2010;5(7):e11345
Dynamics of HIV-1 Quasispecies during Antiviral Treatment Dissected Using Ultra-Deep Pyrosequencing
Hedskog C; Mild M; Jernberg J; Sherwood E; Bratt G; Leitner T; Lundeberg J; Andersson B; Albert J
Article: BIOINFORMATICS. 2010;26(13):1595-1600
Classification of DNA sequences using Bloom filters
Stranneheim H; Kaller M; Allander T; Andersson B; Arvestad L; Lundeberg J
Article: PLOS ONE. 2010;5(5):e10734
Toll-Like Receptor 4 Promoter Polymorphisms: Common TLR4 Variants May Protect against Severe Urinary Tract Infection
Ragnarsdottir B; Jonsson K; Urbano A; Gronberg-Hernandez J; Lutay N; Tammi M; Gustafsson M; Lundstedt A-C; Leijonhufvud I; Karpman D; Wullt B; Truedsson L; Jodal U; Andersson B; Svanborg C
Article: MOLECULAR AND BIOCHEMICAL PARASITOLOGY. 2010;170(2):74-83
var gene transcription dynamics in Plasmodium falciparum patient isolates
Blomqvist K; Normark J; Nilsson D; Ribacke U; Orikiriza J; Trillkott P; Byarugaba J; Egwang TG; Kironde F; Andersson B; Wahlgren M
Article: CANCER CAUSES AND CONTROL. 2009;20(10):2031-2038
Genetic polymorphisms of glutathione S-transferase genes GSTP1, GSTM1, and GSTT1 and risk of esophageal and gastric cardia cancers
Zendehdel K; Bahmanyar S; McCarthy S; Nyren O; Andersson B; Ye W
Article: JOURNAL OF INFECTIOUS DISEASES. 2009;200(9):1456-1464
Plasmodium falciparum Multidrug Resistance Protein 1 and Artemisinin-Based Combination Therapy in Africa
Dahlstrom S; Ferreira PE; Veiga MI; Sedighi N; Wiklund L; Martensson A; Farnert A; Sisowath C; Osorio L; Darban H; Andersson B; Kaneko A; Conseil G; Bjorkman A; Gil JP
Article: PLOS NEGLECTED TROPICAL DISEASES. 2009;3(8):e495
Preclinical Assessment of the Treatment of Second-Stage African Trypanosomiasis with Cordycepin and Deoxycoformycin
Vodnala SK; Ferella M; Lunden-Miguel H; Betha E; van Reet N; Amin DN; Oberg B; Andersson B; Kristensson K; Wigzell H; Rottenberg ME
Article: PLOS PATHOGENS. 2009;5(8):e1000560
Draft Genome Sequencing of Giardia intestinalis Assemblage B Isolate GS: Is Human Giardiasis Caused by Two Different Species?
Franzen O; Jerlstrom-Hultqvist J; Castro E; Sherwood E; Ankarklev J; Reiner DS; Palm D; Andersson JO; Andersson B; Svard SG
Article: JOURNAL OF GENERAL VIROLOGY. 2009;90(Pt 4):843-853
Molecular characterization of a novel Ljungan virus (Parechovirus; Picornaviridae) reveals a fourth genotype and indicates ancestral recombination
Tolf C; Gullberg M; Johansson ES; Tesh R; Andersson B; Lindberg AM
Article: PROTEOMICS. 2008;8(13):2735-2749
Proteomics in Trypanosoma cruzi -: localization of novel proteins to various organelles
Ferella M; Nilsson D; Darban H; Rodrigues C; Bontempi EJ; Docampo R; Andersson B
Article: EXPERIMENTAL PARASITOLOGY. 2008;119(2):308-312
Farnesyl diphosphate synthase localizes to the cytoplasm of Trypanosoma cruzi and T-brucei
Ferella M; Li Z-H; Andersson B; Docampo R
Article: INFECTION, GENETICS AND EVOLUTION. 2008;8(3):340-345
Diversity of the sarco/endoplasmic reticulum Ca²⁺-ATPase orthologue of Plasmodium falciparum (PfATP6)
Dahlstrom S; Veiga MI; Ferreira P; Martensson A; Kaneko A; Andersson B; Bjorkman A; Gil JP
Article: THERAPEUTIC DRUG MONITORING. 2008;30(1):10-15
Polymorphism of antimalaria drug metabolizing, nuclear receptor, and drug transport genes among malaria patients in Zanzibar, East Africa
Ferreira PE; Veiga MI; Cavaco I; Martins JP; Andersson B; Mushin S; Ali AS; Bhattarai A; Ribeiro V; Bjorkman A; Gil JP
Article: BMC GENOMICS. 2007;8:391
Database of Trypanosoma cruzi repeated genes:: 20000 additional gene variants
Arner E; Kindlund E; Nilsson D; Farzana F; Ferella M; Tammi MT; Andersson B
Article: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2007;104(40):15835-15840
PfEMP1-DBL1 α amino acid motifs in severe disease states of Plasmodium falciparum malaria
Normark J; Nilsson D; Ribacke U; Winter G; Moll K; Wheelock CE; Bayarugaba J; Kironde F; Egwang TG; Chen Q; Andersson B; Wahigren M
Article: PLOS ONE. 2007;2(9):e825
A Genetic Basis of Susceptibility to Acute Pyelonephritis
Lundstedt A-C; McCarthy S; Gustafsson MCU; Godaly G; Jodal U; Karpman D; Leijonhufvud I; Linden C; Martinell J; Ragnarsdottir B; Samuelsson M; Truedsson L; Andersson B; Svanborg C
Article: JOURNAL OF INFECTIOUS DISEASES. 2007;195(8):1227-1234
Inherited susceptibility to acute pyelonephritis: A family study of urinary tract infection
Lundstedt A-C; Leijonhufvud I; Ragnarsdottir B; Karpman D; Andersson B; Svanborg C
Article: JOURNAL OF VIROLOGY. 2007;81(8):4130-4136
Identification of a third human polyomavirus
Allander T; Andreasson K; Gupta S; Bjerkner A; Bogdanovic G; Persson MAA; Dalianis T; Ramqvist T; Andersson B
Article: COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE. 2007;86(1):87-92
GRAT - genome-scale rapid alignment tool
Kindlund E; Tammi MT; Arner E; Nilsson D; Andersson B
Article: MOLECULAR AND BIOCHEMICAL PARASITOLOGY. 2007;152(2):123-131
Characterization of a Trypanosoma cruzi acetyltransferase:: cellular location, activity and structure
Ochaya S; Respuela P; Simonsson M; Saraswathi A; Branche C; Lee J; Bua J; Nilsson D; Aslund L; Bontempi EJ; Andersson B
Article: GENOME BIOLOGY. 2007;8(3):r37
Repetitive DNA is associated with centromeric domains in Trypanosoma brucei but not Trypanosoma cruzi
Obado SO; Bot C; Nilsson D; Andersson B; Kelly JM
Article: JOURNAL OF BIOLOGICAL CHEMISTRY. 2006;281(51):39339-39348
A solanesyl-diphosphate synthase localizes in glycosomes of Trypanosoma cruzi
Ferella M; Montalvetti A; Rohloff P; Miranda K; Fang J; Reina S; Kawamukai M; Bua J; Nilsson D; Pravia C; Katzin A; Cassera MB; Aslund L; Andersson B; Docampo R; Bontempi EJ
Article: MOLECULAR AND BIOCHEMICAL PARASITOLOGY. 2006;147(1):30-38
Comparative karyotyping as a tool for genome structure analysis of Trypanosoma cruzi
Branche C; Ochaya S; Åslund L; Andersson B
Article: BMC BIOINFORMATICS. 2006;7:155
DNPTrapper: an assembly editing tool for finishing and analysis of complex repeat regions
Arner E; Tammi MT; Tran AN; Kindlund E; Andersson B
Article: INFECTION AND IMMUNITY. 2006;74(3):1537-1546
Molecular characterization of serine-, alanine-, and proline-rich proteins of Trypanosoma cruzi and their possible role in host cell infection
Baida RCP; Santos WRM; Carmo MS; Yoshida N; Ferreira D; Ferreira AT; El Sayed NM; Andersson B; da Silveira JF
Article: JOURNAL OF MEDICINAL CHEMISTRY. 2005;48(23):7186-7191
Benzophenone-based farnesyltransferase inhibitors with high activity against Trypanosoma cruzi
Esteva MI; Kettler K; Maidana C; Fichera L; Ruiz AM; Bontempi EJ; Andersson B; Dahse HM; Haebel P; Ortmann R; Klebe G; Schlitzer M
Article: HUMAN GENETICS. 2005;117(6):545-557
Complex HTR2C linkage disequilibrium and promoter associations with body mass index and serum leptin
McCarthy S; Mottagui-Tabar S; Mizuno Y; Sennblad B; Hoffstedt J; Arner P; Wahlestedt C; Andersson B
Article: MOLECULAR AND BIOCHEMICAL PARASITOLOGY. 2005;143(2):125-134
Messenger RNA processing sites in Trypanosoma brucei
Benz C; Nilsson D; Andersson B; Clayton C; Guilbride DL
Article: BMC GENETICS. 2005;6:46
MAOA haplotypes associated with thrombocyte-MAO activity
Jansson M; McCarthy S; Sullivan PF; Dickman P; Andersson B; Oreland L; Schalling M; Pedersen NL
Article: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2005;102(36):12891-12896
Cloning of a human parvovirus by molecular screening of respiratory tract samples
Allander T; Tammi MT; Eriksson M; Bjerkner A; Tiveljung-Lindell A; Andersson B
Article: SCIENCE. 2005;309(5733):409-415
The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas disease
El-Sayed NM; Myler PJ; Bartholomeu DC; Nilsson D; Aggarwal G; Tran AN; Ghedin E; Worthey EA; Delcher AL; Blandin G; Westenberger SJ; Caler E; Cerqueira GC; Branche C; Haas B; Anupama A; Arner E; Åslund L; Attipoe P; Bontempi E; Bringaud F; Burton P; Cadag E; Campbell DA; Carrington M; Crabtree J; Darban H; da Silveira JF; de Jong P; Edwards K; Englund PT; Fazelina G; Feldblyum T; Ferella M; Frasch AC; Gull K; Horn D; Hou LH; Huang YT; Kindlund E; Ktingbeil M; Kluge S; Koo H; Lacerda D; Levin MJ; Lorenzi H; Louie T; Machado CR; McCulloch R; McKenna A; Mizuno Y; Mottram JC; Nelson S; Ochaya S; Osoegawa K; Pai G; Parsons M; Pentony M; Pettersson U; Pop M; Ramirez JL; Rinta J; Robertson L; Salzberg SL; Sanchez DO; Seyler A; Sharma R; Shetty J; Simpson AJ; Sisk E; Tammi MT; Tarteton R; Teixeira S; Van Aken S; Vogt C; Ward PN; Wickstead B; Wortman J; White O; Fraser CM; Stuart KD; Andersson B
Article: SCIENCE. 2005;309(5733):404-409
Comparative genomics of trypanosomatid parasitic protozoa
El-Sayed NM; Myler PJ; Blandin G; Berriman M; Crabtree J; Aggarwal G; Caler E; Renauld H; Worthey EA; Hertz-Fowler C; Ghedin E; Peacock C; Bartholomeu DC; Haas BJ; Tran AN; Wortman JR; Alsmark UCM; Angiuoli S; Anupama A; Badger J; Bringaud F; Cadag E; Carlton JM; Cerqueira GC; Creasy T; Delcher AL; Djikeng A; Embley TM; Hauser C; Ivens AC; Kummerfeld SK; Pereira-Leal JB; Nilsson D; Peterson J; Salzberg SL; Shallom J; Silva JC; Sundaram J; Westenberger S; White O; Metville SE; Donelson JE; Andersson B; Stuart KD; Hall N
Article: AMERICAN JOURNAL OF MEDICAL GENETICS, PART B: NEUROPSYCHIATRIC GENETICS. 2005;136B(1):69-71
Mutation screening of a haplotype block around the insulin degrading enzyme gene and association with Alzheimer's disease
Feuk L; McCarthy S; Andersson B; Prince JA; Brookes AJ
Article: AMERICAN JOURNAL OF MEDICAL GENETICS, PART B: NEUROPSYCHIATRIC GENETICS. 2005;134B(1):84-89
Serotonin receptor 2C (HTR2C) and schizophrenia:: Examination of possible medication and genetic influences on expression levels
Castensson A; Åberg K; McCarthy S; Saetre P; Andersson B; Jazin E
Article: EXPERIMENTAL PARASITOLOGY. 2005;109(3):143-149
Strand asymmetry patterns in trypanosomatid parasites
Nilsson D; Andersson B
Article: GENE. 2005;346:153-161
Telomere and subtelomere of Trypanosoma cruzi chromosomes are enriched in (pseudo)genes of retrotransposon hot spot and trans-sialidase-like gene families:: the origins of T-cruzi telomeres
Kim D; Chiurillo MA; El-Sayed N; Jones K; Santos MRM; Porcile PE; Andersson B; Myler P; da Silveira JF; Ramírez JL
Article: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2005;102(5):1502-1506
Laminin α1 globular domains 4-5 induce fetal development but are not vital for embryonic basement membrane assembly
Schéele S; Falk M; Franzén A; Ellin F; Ferletta M; Lonai P; Andersson B; Timpl R; Forsberg E; Ekblom P
Article: NATURE. 2004;432(7018):717-722
A genetic variation map for chicken with 2.8 million single-nucleotide polymorphisms
Wong GKS; Liu B; Wang J; Zhang Y; Yang X; Zhang ZJ; Meng QS; Zhou J; Li DW; Zhang JJ; Ni PX; Li SG; Ran LH; Li H; Zhang JG; Li RQ; Li ST; Zheng HK; Lin W; Li GY; Wang XL; Zhao WM; Li J; Ye C; Dai MT; Ruan J; Zhou Y; Li YZ; He XM; Zhang YZ; Wang J; Huang XG; Tong W; Chen J; Ye J; Chen C; Wei N; Li GQ; Dong L; Lan FD; Sun YQ; Zhang ZP; Yang Z; Yu YP; Huang YQ; He DD; Xi Y; Wei D; Qi QH; Li WJ; Shi JP; Wang MH; Xie F; Wang JJ; Zhang XW; Wang P; Zhao YQ; Li N; Yang N; Dong W; Hu SN; Zeng CQ; Zheng WM; Hao BL; Hillier LW; Yang SP; Warren WC; Wilson RK; Brandström M; Ellegren H; Crooijmans RPMA; van der Poel JJ; Bovenhuis H; Groenen MAM; Ovcharenko I; Gordon L; Stubbs L; Lucas S; Glavina T; Aerts A; Kaiser P; Rothwell L; Young JR; Rogers S; Walker BA; van Hateren A; Kaufman J; Bumstead N; Lamont SJ; Zhou HJ; Hocking PM; Morrice D; de Koning DJ; Law A; Bartley N; Burt DW; Hunt H; Cheng HH; Gunnarsson U; Wahlberg P; Andersson L; Kindlund E; Tammi MT; Andersson B; Webber C; Ponting CP; Overton IM; Boardman PE; Tang HZ; Hubbard SJ; Wilson SA; Yu J; Wang J; Yang HM
Article: EXPERIMENTAL PARASITOLOGY. 2004;108(3-4):81-88
Identification and characterization of an interspersed repetitive DNA fragment in Plasmodium vivax with potential use for specific parasite detection
Carnevale S; Velásquez JN; del Portillo H; Labbé JH; Cabrera MG; Ferella M; Andersson B; Guarnera EA; Angel SO
Article: ALCOHOL AND ALCOHOLISM. 2004;39(5):380-385
Analysis of 5-hydroxytryptamine 2c receptor gene promoter variants as alcohol-dependence risk factors
Mottagui-Tabar S; McCarthy S; Reinemund J; Andersson B; Wahlestedt C; Heilig M
Article: MOLECULAR AND BIOCHEMICAL PARASITOLOGY. 2004;136(1):101-107
Identification and characterization of serine proteinase inhibitors from Neospora caninum
Bruno S; Duschak VG; Ledesma B; Ferella M; Andersson B; Guarnera EA; Angel SO
Article: MOLECULAR AND BIOCHEMICAL PARASITOLOGY. 2004;134(2):183-191
Gene synteny and evolution of genome architecture in trypanosomatids
Ghedin E; Bringaud F; Peterson J; Myler P; Berriman M; Ivens A; Andersson B; Bontempi E; Eisen J; Angiuoli S; Wanless D; Von Arx A; Murphy L; Lennard N; Salzberg S; Adams MD; White O; Hall N; Stuart K; Fraser CM; El-Sayed NMA
Article: BIOINFORMATICS. 2004;20(5):803-804
ReDiT: Repeat Discrepancy Tagger - a shotgun assembly finishing aid
Tammi MT; Arner E; Kindlund E; Andersson B
Article: COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE. 2004;73(1):55-60
A graphical tool for parasite genome annotation
Nilsson D; Andersson B
Article: MAMMALIAN GENOME. 2003;14(8):526-536
Strong conservation of the human NF2 locus based on sequence comparison in five species
Hansson CM; Ali H; Bruder CEG; Fransson I; Kluge S; Andersson B; Roe BA; Menzel U; Dumanski JP
Article: NUCLEIC ACIDS RESEARCH (NAR). 2003;31(15):4663-4672
Correcting errors in shotgun sequences
Tammi MT; Arner E; Kindlund E; Andersson B
Article: ACTA TROPICA. 2003;87(2):269-278
Trypanothione synthetase locus in Trypanosoma cruzi CL Brener strain shows an extensive allelic divergence
Tran AN; Andersson B; Pettersson U; Åslund L
Article: COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE. 2003;70(1):47-59
TRAP: Tandem Repeat Assembly Program produces improved shotgun assemblies of repetitive sequences
Tammi MT; Arner E; Andersson B
Article: MOLECULAR AND BIOCHEMICAL PARASITOLOGY. 2002;124(1-2):73-78
Identification of non-autonomous non-LTR retrotransposons in the genome of Trypanosoma cruzi
Bringaud F; García-Pérez JL; Heras SR; Ghedin E; El-Sayed NM; Andersson B; Baltz T; Lopez MC
Article: BIOINFORMATICS. 2002;18(3):379-388
Separation of nearly identical repeats in shotgun assemblies using defined nucleotide positions, DNPs
Tammi MT; Arner E; Britton T; Andersson B
Journal article: GENE FUNCTION AND DISEASE. 2000;1(2):82-86
Putative regulatory domains in the human and mouse CVADR genes
Andersson B; Tomko RP; Edwards K; Mirza M; Darban H; Öncü D; Sonnhammer E; Sollerbrant K; Philipson L
Article: GENOME RESEARCH. 2000;10(8):1103-1107
Gene survey of the pathogenic protozoan Trypanosoma cruzi
Porcel BM; Tran AN; Tammi M; Nyarady Z; Rydåker M; Urmenyu TP; Rondinelli E; Petterson U; Andersson B; Åslund L
Article: EXPERIMENTAL PARASITOLOGY. 2000;95(3):176-186
Trypanosoma cruzi:: A putative vacuolar ATP synthase subunit and a CAAX prenyl protease-encoding gene, as examples of gene identification in genome projects
Porcel BM; Åslund L; Pettersson U; Andersson B
Article: HUMAN GENETICS. 2000;106(5):506-516
Fine mapping of the constitutional translocation t(11;22)(q23;q11)
Tapia-Páez I; O'Brien KP; Kost-Alimova M; Sahlén S; Kedra D; Bruder CEG; Andersson B; Roe BA; Hu P; Imreh S; Blennow E; Dumanski JP
Article: MOLECULAR AND BIOCHEMICAL PARASITOLOGY. 1999;100(2):229-234
A chromosome-specific dispersed gene family in Trypanosoma cruzi
Tran AN; Andersson B; Pettersson U; Åslund L
Article: NATURE GENETICS. 1999;21(2):169-175
The gene encoding ribosomal protein S19 is mutated in Diamond-Blackfan anaemia
Draptchinskaia N; Gustavsson P; Andersson B; Pettersson M; Willig TN; Dianzani I; Ball S; Tchernia G; Klar J; Matsson H; Tentler D; Mohandas N; Carlsson B; Dahl N
Article: HUMAN GENETICS. 1998;103(3):340-345
The NIK protein kinase and C17orf1 genes: chromosomal mapping, gene structures and mutational screening in frontotemporal dementia and parkinsonism linked to chromosome 17
Aronsson FC; Magnusson P; Andersson B; Karsten SL; Shibasaki Y; Lendon CL; Goate AM; Brookes AJ
Article: GENOME RESEARCH. 1998;8(8):809-816
Complete sequence of a 93.4-kb contig from chromosome 3 of Trypanosoma cruzi containing a strand-switch region
Andersson B; Åslund L; Tammi M; Tran AN; Hoheisel JD; Pettersson U
Article: CYTOGENETIC AND GENOME RESEARCH. 1997;78(1):21-24
In situ hybridisation mapping of genomic clones for five human respiratory chain complex I genes
Dunbar DR; Shibasaki Y; Dobbie L; Andersson B; Brookes AJ
Article: MITOCHONDRIAL DNA. 1997;7(2):63-70
Simultaneous shotgun sequencing of multiple cDNA clones
Andersson B; Lu J; Shen Y; Wentland MA; Gibbs RA
Article: BIOTECHNIQUES. 1996;20(6):1022-1027
Method for 96-well M13 DNA template preparations for large-scale sequencing
Andersson B; Lu J; Edwards KE; Muzny DM; Gibbs RA
Article: ANALYTICAL BIOCHEMISTRY. 1996;236(1):107-113
A ''double adaptor'' method for improved shotgun library construction
Andersson B; Wentland MA; Ricafrente JY; Liu W; Gibbs RA
Article: MITOCHONDRIAL DNA. 1995;5(4):219-223
COMPLETE SEQUENCE OF A 38.4-KB HUMAN COSMID INSERT CONTAINING THE POLYMORPHIC MARKER DXS455 FROM XQ28
ANDERSSON B; LU F; MUZNY DM; WARREN ST; GIBBS RA
Journal article: ENVIRONMENTAL HEALTH PERSPECTIVES. 1994;102(Suppl 4):135-138
MUTATIONS INDUCED IN THE HYPOXANTHINE PHOSPHORIBOSYL TRANSFERASE GENE BY 3 URBAN AIR-POLLUTANTS - ACETALDEHYDE, BENZO[A]PYRENE DIOLEPOXIDE, AND ETHYLENE-OXIDE
LAMBERT B; ANDERSSON B; BASTLOVA T; HOU SM; HELLGREN D; KOLMAN A
Journal article: ANALYTICAL BIOCHEMISTRY. 1994;218(2):300-308
ADAPTER-BASED URACIL DNA GLYCOSYLASE CLONING SIMPLIFIES SHOTGUN LIBRARY CONSTRUCTION FOR LARGE-SCALE SEQUENCING
ANDERSSON B; POVINELLI CM; WENTLAND MA; SHEN Y; MUZNY DM; GIBBS RA
Journal article: MUTATION RESEARCH - FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS. 1993;287(2):283-292
MOLECULAR ANALYSIS OF ETHYLENE OXIDE-INDUCED MUTATIONS AT THE HPRT LOCUS IN HUMAN-DIPLOID FIBROBLASTS
BASTLOVA T; ANDERSSON B; LAMBERT B; KOLMAN A
Journal article: GENOME RESEARCH. 1993;2(4):293-300
Rapid characterization of HIV-1 sequence diversity using denaturing gradient gel electrophoresis and direct automated DNA sequencing of PCR products.
Andersson B; Ying JH; Lewis DE; Gibbs RA
Journal article: MUTAGENESIS. 1993;8(1):43-49
MOLECULAR-SPECTRUM OF BACKGROUND MUTATION AT THE HPRT LOCUS IN HUMAN LYMPHOCYTES-T
HOU SM; STEEN AM; FALT S; ANDERSSON B
Journal article: PHARMACOGENETICS AND GENOMICS. 1992;2(6):329-336
MISSENSE MUTATIONS AND EVOLUTIONARY CONSERVED AMINO-ACIDS AT THE HUMAN HYPOXANTHINE PHOSPHORIBOSYL-TRANSFERASE LOCUS
LAMBERT B; MARCUS S; ANDERSSON B; HOU SM; STEEN AM; HELLGREN D
Journal article: MUTATION RESEARCH - FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS. 1992;269(1):41-53
SCREENING FOR MUTATIONS IN HUMAN HPRT CDNA USING THE POLYMERASE CHAIN-REACTION (PCR) IN COMBINATION WITH CONSTANT DENATURANT GEL-ELECTROPHORESIS (CDGE)
SMITHSORENSEN B; HOVIG E; ANDERSSON B; BORRESEN AL
Journal article: MUTATION RESEARCH - FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS. 1992;269(1):129-140
STRAND SPECIFICITY FOR MUTATIONS INDUCED BY (+)-ANTI BPDE IN THE HPRT GENE IN HUMAN LYMPHOCYTES-T
ANDERSSON B; FALT S; LAMBERT B
Journal article: HUMAN GENETICS. 1992;89(4):395-400
MUTATION ANALYSIS AND PRENATAL-DIAGNOSIS IN A LESCH-NYHAN FAMILY SHOWING NONRANDOM X-INACTIVATION INTERFERING WITH CARRIER DETECTION TESTS
MARCUS S; STEEN AM; ANDERSSON B; LAMBERT B; KRISTOFFERSSON U; FRANCKE U
Journal article: MOLECULAR GENETIC MEDICINE. 1992;2:161-188
Molecular analysis of mutation in the human gene for hypoxanthine phosphoribosyltransferase.
Lambert B; Andersson B; He SM; Marcus S; Steen AM
Journal article: ENVIRONMENTAL AND MOLECULAR MUTAGENESIS. 1992;20(2):89-95
MUTATIONS CAUSING DEFECTIVE SPLICING IN THE HUMAN HPRT GENE
ANDERSSON B; HOU SM; LAMBERT B
Journal article: MUTATION RESEARCH - FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS. 1990;245(2):75-82
MUTATIONS INDUCED BY BENZO[A]PYRENE DIOLEPOXIDE AT THE HPRT LOCUS IN HUMAN LYMPHOCYTES-T INVITRO
ANDERSSON B; LAMBERT B
Journal article: HUMAN GENETICS. 1990;85(3):300-304
2 MUTATIONS WITHIN THE CODING SEQUENCE OF THE PHENYLALANINE-HYDROXYLASE GENE
SVENSSON E; ANDERSSON B; HAGENFELDT L
Journal article: ACTA PHYSIOLOGICA SCANDINAVICA, SUPPLEMENT. 1990;140:85-92
MOLECULAR ANALYSIS OF MUTATION AT THE HUMAN HPRT LOCUS
LAMBERT B; ANDERSSON B; HE SM; HELLGREN D; MARCUS S; STEEN AM
Journal article: THEORY IN BIOSCIENCES. 1989;108(5):395-403
HPRT-MUTATIONS IN HUMAN T-CELL CLONES
ANDERSSON B; HE SM; HELLGREN D; STEEN AM; LAMBERT B
Journal article: JOURNAL OF MATHEMATICAL PHYSICS. 1985;26(1):112-123
The action-angle variables for the massless relativistic string in 1+1 dimensions
Söderberg B; Andersson B; Gustafson G
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High genome plasticity and frequent genetic exchange in Leishmania tropica isolates from Afghanistan, Iran and Syria
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The genomic basis of domestic colonisation and dispersal in Chagas disease vectors
Hernandez-Castro L; Villacís A; Jacobs A; Cheaib B; Day C; Ocaña-Mayorga S; Yumiseva C; Bacigalupo A; Andersson B; Matthews L; Landguth E; Costales J; Llewellyn M; Grijalva M
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Soratto TAT; Darban H; Bjerkner A; Coorens M; Albert J; Allander T; Andersson B
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Activation of a neural stem cell transcriptional program in parenchymal astrocytes
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Divergent Clonal Differentiation Trajectories Establish CD8 ⁺ Memory T Cell Heterogeneity During Acute Viral Infections in Humans
Mold JE; Modolo L; Hård J; Zamboni M; Larsson AJ; Stenudd M; Eriksson C-J; Durif G; Ståhl P; Borgström E; Picelli S; Reinius B; Sandberg R; Reu P; Talavera-Lopez C; Andersson B; Blom K; Sandberg JK; Picard F; Michaelsson J; Frisén J
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Clonally distinct differentiation trajectories shape CD8⁺ memory T cell heterogeneity after acute viral infections in humans
Mold J; Modolo L; Hård J; Zamboni M; Larsson AJM; Eriksson C-J; Ståhl P; Borgström E; Picelli S; Reinius B; Sandberg R; Réu P; Talavera-Lopez C; Andersson B; Blom K; Sandberg J; Picard F; Michaëlsson J; Frisén J
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Influence of filaggrin loss-of-function mutations in hostemicrobe interactions during atopic skin inflammation
Olah P; Szlavicz E; Consortium E; Rodriguez E; Weidinger S; Fyhrquist N; Alenius H; Lauerma A; Andersson B; Homey B
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RHODNIUS ECUADORIENSIS POPULATION GENOMICS IN SOUTHERN ECUADOR FOR GUIDING VECTOR CONTROL PROGRAMS
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Single-cell RNA sequencing of neurogenic astrocytes as a tool to improve brain regeneration
Magnusson J; Santopolo G; Zamboni M; Mold J; Barrientos-Somarribas M; Talavera-Lopez C; Andersson B; Frisen J
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Parallel sexual and parasexual population genomic structure in Trypanosoma cruzi
Schwabl P; Imamura H; Van den Broeck F; Costales JA; Maiguashca J; Miles MA; Andersson B; Grijalva MJ; Llewellyn MS
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Repeat-driven generation of antigenic diversity in a major human pathogen Trypanosoma cruzi
Talavera-López C; Messenger LA; Lewis MD; Yeo M; Reis-Cunha JL; Bartholomeu DC; Calzada JE; Saldaña A; Ramírez JD; Guhl F; Ocaña-Mayorga S; Costales JA; Gorchakov R; Jones K; Garcia MN; Grisard EC; Teixeira SMR; Carrasco H; Bottazzi ME; Hotez PJ; Murray KO; Grijalva MJ; Burleigh B; Miles MA; Andersson B
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Visceral leishmaniasis: a combined wet-lab and in silico approach to the discovery of biomarkers of disease progression and post-chemotherapy relapse
Hinckel BCB; Marlais T; Airs S; Imamura H; Dujardin JC; Falconar AK; Bhattacharyya T; Andersson B; Mertens P; Miles MA
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Preciction and Prevention of Parasitic Diseases Using a Landscape Genomics Framework
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Performing Skin Microbiome Research: A Method to the Madness
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Microbe-host interplay in atopic dermatitis and psoriasis
Fyhrquist N; Andersson B; Kere J; Muirhead G; Prast-Nielsen S; Jeanmougin M; Barker J; Lauerma A; Homey B; Schroeder J; Soumelis V; Nestle F; Alenius H
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Genetic diversity and diagnostics development for trypanosomatid protozoa
Bhattacharyya T; Franzen O; Falconar A; Baleela R; Mauricio I; Yeo M; Luquetti A; Andersson B; Carlier Y; Miles M
Conference publication: INTERNATIONAL JOURNAL FOR PARASITOLOGY. 2008;38:S72
The role of Plasmodium falciparum multidrug resistance-associated protein 1 (pfmrp1) in development of resistance to artemisinin-based combination therapies (ACTs).
Dahlstrom S; Ferreira P; Wiklund L; Veiga MI; Sedighi N; Martensson A; Kaneko A; Darban H; Andersson B; Gil JP
Conference publication: INTERNATIONAL JOURNAL FOR PARASITOLOGY. 2008;38:S71
The sarco/endoplasmic reticulum Ca2+-ATPase orthologue of Plasmodium falciparum (PfATP6) harbours high SNP diversity.
Dahlstrom S; Veiga MI; Ferreira P; Martensson A; Kaneko A; Andersson B; Bjorkman A; Gil JP
Conference publication: INTERNATIONAL JOURNAL FOR PARASITOLOGY. 2008;38:S26-S27
PfEMP1-DBL1 amino acid motifs in severe disease states of Plasmodium falciparum malaria.
Normark J; Nilsson D; Ribackel U; Winter G; Moll K; Wheelock CE; Bayarugaba J; Kironde F; Egwang TG; Chen Q; Andersson B; Wahlgren M
Conference publication: TROPICAL MEDICINE AND INTERNATIONAL HEALTH. 2007;12:220
Polymorphisms of drug metabolising, nuclear receptor and drug transport genes among malaria patients in Zanzibar
Ferreira P; Veiga MI; Cavaco I; Martins JP; Andersson B; Mesellem M; Ryan K; Diderot K; Ribeiro V; Bjorkman A; Gil J
Corrigendum: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2005;102(43):15712
Cloning of a human parvovirus by molecular screening of respiratory tract samples (vol 102, pg 12891, 2005)
Allander T; Tammi MT; Eriksson M; Bjerkner A; Tiveljung-Lindell A; Andersson B
Book chapter: ENCYCLOPEDIA OF GENETICS, GENOMICS, PROTEOMICS AND BIOINFORMATICS. 2005;p.
Errors in sequence assembly and corrections
Tammi MT; Andersson B
Book chapter: ENCYCLOPEDIA OF GENETICS, GENOMICS, PROTEOMICS AND BIOINFORMATICS. 2005;p.
Algorithms for sequence errors
Andersson B; Tammi MT
Conference publication: AMERICAN JOURNAL OF KIDNEY DISEASES. 2005;45(4):A37
Low CXCR1 expression, SNPs and susceptibility to pyelonephritis
Lundstedt AC; McCarthy S; Godaly G; Gustafsson MCU; Karpman D; Leijonhufvud I; Samuelsson M; Andersson B; Svanborg C
Preprint: ARXIV. 1998
The Feynman-Wilson gas and the Lund model
Andersson B; Gustafson G; Ringner M; Sutton PJ
Letter: GENOME RESEARCH. 1997;7(4):353-358
Large-scale concatenation cDNA sequencing
Yu W; Andersson B; Worley KC; Muzny DM; Ding Y; Liu W; Ricafrente JY; Wentland MA; Lennon G; Gibbs RA
Review: TRENDS IN PARASITOLOGY. 1997;13(1):16-22
The Trypanosoma cruzi genome initiative
Zingales B; Rondinelli E; Degrave W; daSilveira JF; Levin M; LePaslier D; Modabber F; Dobrokhotov B; Swindle J; Kelly JM; Aslund L; Hoheisel JD; Ruiz AM; Cazzulo JJ; Pettersson U; Frasch AC; da Silveira J; Cano MI; Santos MR; Degrave W; Brandao A; de Miranda A; Gonçalves A; Pereira MES; Umezawa WS; Almeida MA; Oliveira RP; Macedo A; Levin M; Brandariz S; Ferrari I; Schijman A; Medrano C; Vasquez M; Lorenzi H; Ben-Dov C; Gonzalez A; Cortes A; Rondinelli E; Ramirez JL; Rangel-Aldano R; Zingales B; Gruber A; do Souto RP; Ruiz AM; Bua J; Bontempi E; Porcel B; Pravia C; Garcia G; Frasch AC; Gazzulo JJ; Sánchez D; Uemura G; Guerin M; Frasch AC; Ugalde RA; Kelly JM; Mondragon A; Swindle J; Hoheisel JD; Hanke J; Pettersson L; Aslund L; Andersson B; Modabber T; Dobrokhotov B
Conference publication: AMERICAN JOURNAL OF HUMAN GENETICS. 1995;57(4):790
GENOMIC SEQUENCE-ANALYSIS OF THE HUMAN CD4 GENE AND ITS DOWNSTREAM REGION
ANSARILARI MA; LU F; MUZNY DM; ANDERSSON B; WENTLAND MA; ZHENG B; LILLEY CE; SPANOS S; GIBBS RA
Conference publication: CYTOGENETIC AND GENOME RESEARCH. 1994;67(4):338
SEQUENCING FROM FRAXA TO IDS
ANDERSSON B; MUZNY D; WENTLAND M; LU F; GU Y; NELSON D; GIBBS RA
Conference publication: CYTOGENETIC AND GENOME RESEARCH. 1994;67(4):329-330
IMPROVEMENT OF METHODS FOR LARGE-SCALE SHOTGUN SEQUENCING, APPLICATION TO XQ28
ANDERSSON B; WENTLAND MA; MUZNY DM; POVINELLI CM; LU F; SHEN Y; GIBBS RA
Conference publication: AMERICAN JOURNAL OF HUMAN GENETICS. 1993;53(3):686
METHODS FOR SEQUENCE CHARACTERIZATION OF HUMAN X-LINKED REGIONS
ANDERSSON B; POVINELLI CM; MUZNY DM; GIBBS RA
Conference publication: JOURNAL OF CELLULAR BIOCHEMISTRY. 1993;:73
EXAMINATION OF HIV-1 PROVIRAL SEQUENCE DIVERSITY USING DENATURING GRADIENT GEL-ELECTROPHORESIS (DGGE) REVEALS DOMINANT FORMS WITHIN PATIENT SAMPLES
ANDERSSON B; GIBBS RA
Conference publication: CYTOGENETIC AND GENOME RESEARCH. 1993;64(3-4):178
DNA-SEQUENCING OF X-LINKED CLONES
ANDERSSON B; POVINELLI CM; MUZNY DM; GIBBS RA
Conference publication: MUTATION RESEARCH - ENVIRONMENTAL MUTAGENESIS AND RELATED SUBJECTS INCLUDING METHODOLOGY. 1992;271(2):164
MUTATIONS INDUCED BY BENZO[A]PYRENE IN HUMAN LYMPHOCYTES-T INVITRO
ANDERSSON B; LAMBERT B
Conference publication: MUTATION RESEARCH - ENVIRONMENTAL MUTAGENESIS AND RELATED SUBJECTS INCLUDING METHODOLOGY. 1991;252(2):210-211
MUTATION AND GENE-EXPRESSION AT THE HPRT LOCUS IN HUMAN-LYMPHOCYTES
LAMBERT B; ANDERSSON B; HE SH; HELLGREN D; MARCUS S; STEEN AM
Conference publication: MUTATION RESEARCH - ENVIRONMENTAL MUTAGENESIS AND RELATED SUBJECTS INCLUDING METHODOLOGY. 1989;216(1):71-72
STUDIES OF HPRT MUTATION, HPRT MESSENGER-RNA LEVELS AND KARYOTYPES IN HUMAN T-CELL CLONES
ANDERSSON B; HE SH; HELLGREN D; HOLMBERG K; MARCUS S; STEEN AM; LAMBERT B
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Grants

Improved diagnostics of Chagas disease in endemic areas of Bolivia
Swedish Research Council
1 January 2022 - 31 December 2024
Targeting the trajectory of drug resistance development in eukaryotic parasites.
Swedish Research Council
1 December 2018 - 31 December 2023
Frontier genomics discovery of immune evasion and recombination mechanisms in Trypanosoma cruzi.
Swedish Research Council
1 January 2017 - 31 December 2019
The Human Microbiome Atlas in Health and Disease
Knut and Alice Wallenberg Foundation
1 January 2012 - 1 January 2017
MAARS (Microbes in Allergy and Autoimmunity Related to the Skin)
European Commission Directorate-General for Research and Innovation
1 April 2011 - 31 March 2015
Metagenomics tools for the discovery of previously unknown disease-causing human viruses
Swedish Research Council
1 January 2011 - 31 December 2013
Strain variation and functional genomics in Trypanosoma cruzi
Swedish Research Council
1 January 2011 - 31 December 2013
SYSTEMS BIOLOGY AND COMPARATIVE GENOMICS IN DIPLOMONADS: IDENTIFICATION OF VIRULENCE GENES AND DEVELOPMENT OF DIAGNOSTIC TOOLS
Swedish Research Council for Environment Agricultural Sciences and Spatial Planning
1 January 2011 - 31 December 2013
CHAGASEPINET (Comparative epidemiology of genetic lineages of Trypanosoma cruzi)
European Commission Directorate-General for Research and Innovation
1 January 2009 - 31 December 2012
Comparative genomics in Diplomonads.
Swedish Research Council for Environment Agricultural Sciences and Spatial Planning
1 January 2008 - 31 December 2010
T CRUZI GENOME: UU
National Institute of Allergy and Infectious Diseases
1 April 2000 - 31 March 2005
Against the confusion of the interaction between Trypanosoma brucei and its vector, the tsetse fly
Swedish Research Council

Employments

Professor, Department of Cell and Molecular Biology, Karolinska Institutet, 2007-

Degrees and Education

Docent, Uppsala Universitet, 1999
PhD, Medical Genetics, Molecular characterization of BPDE-induced mutation at the HPRT-locus in human T-lymphocytes, MMK, Karolinska Institute, 1992
Bachelor of Science, Molecular Biology, Linköping University, 1987

Visiting research fellowships

Postdoc, Baylor College of Medicine, 1992-1995

About me

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Degrees and Education

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