Anatoly Dubnovitsky

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Articles

Article: MOLECULAR IMMUNOLOGY. 2022;152:106-110
Five commercially-available antibodies react differentially with allelic forms of human HLA-DR beta chain
Houtman M; Dzebisashvili A; Dubnovitsky A; Kozhukh G; Ronnblom L; Klareskog L; Malmstrom V; Padyukov L
Article: SCIENTIFIC REPORTS. 2021;11(1):24512
Biased TCR gene usage in citrullinated Tenascin C specific T-cells in rheumatoid arthritis
Sharma RK; Boddul SV; Yoosuf N; Turcinov S; Dubnovitsky A; Kozhukh G; Wermeling F; Kwok WW; Klareskog L; Malmstrom V
Article: COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL. 2021;19:5360-5370
A rapid CRISPR competitive assay for in vitro and in vivo discovery of potential drug targets affecting the hematopoietic system
Shen Y; Jiang L; Iyer VS; Raposo B; Dubnovitsky A; Boddul SV; Kasza Z; Wermeling F
Article: JOURNAL OF TRANSLATIONAL AUTOIMMUNITY. 2021;4:100087
In vitro and ex vivo functional characterization of human HLA-DRB1*04 restricted T cell receptors
Boddul SV; Sharma RK; Dubnovitsky A; Raposo B; Gerstner C; Shen Y; Iyer VS; Kasza Z; Kwok WW; Winkler AR; Klareskog L; Malmstrom V; Bettini M; Wermeling F
Article: BMC IMMUNOLOGY. 2020;21(1):27
Multi-HLA class II tetramer analyses of citrulline-reactive T cells and early treatment response in rheumatoid arthritis
Gerstner C; Turcinov S; Hensvold AH; Chemin K; Uchtenhagen H; Ramwadhdoebe TH; Dubnovitsky A; Kozhukh G; Ronnblom L; Kwok WW; Achour A; Catrina A; van Baarsen LGM; Malmstrom V
Article: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES. 2020;21(9):E3235-3235
Glycosylation Tunes Neuroserpin Physiological and Pathological Properties
Visentin C; Broggini L; Sala BM; Russo R; Barbiroli A; Santambrogio C; Nonnis S; Dubnovitsky A; Bolognesi M; Miranda E; Achour A; Ricagno S
Article: JOURNAL OF AUTOIMMUNITY. 2018;92:47-56
Memory T cells specific to citrullinated α-enolase are enriched in the rheumatic joint
Pieper J; Dubnovitsky A; Gerstner C; James EA; Rieck M; Kozhukh G; Tandre K; Pellegrino S; Gebe JA; Ronnblom L; Sandalova T; Kwok WW; Klareskog L; Buckner JH; Achour A; Malmstrom V
Article: FRONTIERS IN IMMUNOLOGY. 2016;7:494
Functional and Structural Characterization of a Novel HLA-DRB1*04:01-Restricted α-Enolase T Cell Epitope in Rheumatoid Arthritis
Gerstner C; Dubnovitsky A; Sandin C; Kozhukh G; Uchtenhagen H; James EA; Ronnelid J; Ytterberg AJ; Pieper J; Reed E; Tandre C; Rieck M; Zubarev RA; Ronnblom L; Sandalova T; Buckner JH; Achour A; Malmstrom V
Journal article: ANGEWANDTE CHEMIE-INTERNATIONAL EDITION. 2014;126(47):12970-12974
A Hexameric Peptide Barrel as Building Block of Amyloid‐β Protofibrils
Lendel C; Bjerring M; Dubnovitsky A; Kelly RT; Filippov A; Antzutkin ON; Nielsen NC; Härd T
Article: ANGEWANDTE CHEMIE-INTERNATIONAL EDITION. 2014;53(47):12756-12760
A Hexameric Peptide Barrel as Building Block of Amyloid-β Protofibrils
Lendel C; Bjerring M; Dubnovitsky A; Kelly RT; Filippov A; Antzutkin ON; Nielsen NC; Hard T
Journal article: PLOS ONE. 2013;8(10):10.1371/annotation/44be8a
Correction: Amyloid-β Protofibrils: Size, Morphology and Synaptotoxicity of an Engineered Mimic
Dubnovitsky A; Sandberg A; Rahman MM; Benilova I; Lendel C; HÃ¤rd T
Article: PROTEIN ENGINEERING DESIGN & SELECTION. 2013;26(10):635-644
High-affinity binding to staphylococcal protein A by an engineered dimeric Affibody molecule
Lindborg M; Dubnovitsky A; Olesen K; Bjorkman T; Abrahmsen L; Feldwisch J; Hard T
Article: ACTA CRYSTALLOGRAPHICA SECTION D: BIOLOGICAL CRYSTALLOGRAPHY. 2013;69(Pt 5):804-811
Structural basis of L-phosphoserine binding to Bacillus alcalophilus phosphoserine aminotransferase
Battula P; Dubnovitsky AP; Papageorgiou AC
Article: PLOS ONE. 2013;8(7):e66101
Amyloid-β Protofibrils: Size, Morphology and Synaptotoxicity of an Engineered Mimic
Dubnovitsky A; Sandberg A; Rahman MM; Benilova I; Lendel C; Hard T
Article: STRUCTURE. 2012;20(11):1861-1871
Allosteric Mechanism Controls Traffic in the Chaperone/Usher Pathway
Di Yu X; Dubnovitsky A; Pudney AF; MacIntyre S; Knight SD; Zavialov AV
Journal article: ALZHEIMERS & DEMENTIA. 2011;7(4S_Part_24):e21-e22
P4‐316: Stabilization of neurotoxic Alzheimer amyloid‐beta oligomers by protein engineering
Dubnovitsky A; Sandberg A; Luheshi L; Söllvander S; de Barros TP; Macao B; Knowles T; Biverstål H; Lendel C; Ekholm‐Petterson F; Lannfelt L; Dobson C; Härd T
Article: JOURNAL OF MOLECULAR BIOLOGY. 2010;403(2):243-259
Conserved Hydrophobic Clusters on the Surface of the Caf1A Usher C-Terminal Domain Are Important for F1 Antigen Assembly
Dubnovitsky AP; Duck Z; Kersley JE; Hard T; MacIntyre S; Knight SD
Article: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2010;107(35):15595-15600
Stabilization of neurotoxic Alzheimer amyloid-β oligomers by protein engineering
Sandberg A; Luheshi LM; Sollvander S; de Barros TP; Macao B; Knowles TPJ; Biverstal H; Lendel C; Ekholm-Petterson F; Dubnovitsky A; Lannfelt L; Dobson CM; Hard T
Article: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2010;107(34):15039-15044
Structural basis for high-affinity HER2 receptor binding by an engineered protein
Eigenbrot C; Ultsch M; Dubnovitsky A; Abrahmsen L; Hard T
Article: PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS. 2006;63(4):742-753
Effect of pH on the structure and stability of Bacillus circulans ssp alkalophilus phosphoserine aminotransferase:: Thermodynamic and crystallographic studies
Kapetaniou EG; Thanassoulas A; Dubnovitsky AP; Nounesis G; Papageorgiou AC
Article: PROTEIN SCIENCE. 2005;14(6):1498-1507
Strain relief at the active site of phosphoserine aminotransferase induced by radiation damage
Dubnovitsky AP; Ravelli RBG; Popov AN; Papageorgiou AC
Article: PROTEIN SCIENCE. 2005;14(1):97-110
Enzyme adaptation to alkaline pH:: Atomic resolution (1.08 A) structure of phosphoserine aminotransferase from Bacillus alcalophilus
Dubnovitsky AP; Kapetaniou EG; Papageorgiou AC
Article: ACTA CRYSTALLOGRAPHICA SECTION D: BIOLOGICAL CRYSTALLOGRAPHY. 2003;59(Pt 12):2319-2321
Expression, purification, crystallization and preliminary crystallographic analysis of phosphoserine aminotransferase from Bacillus alcalophilus
Dubnovitsky AP; Kapetaniou EG; Papageorgiou AC
Article: JOURNAL OF STRUCTURAL BIOLOGY. 2002;138(3):171-186
Antiferritin VL homodimer binds human spleen ferritin with high specificity
Nymalm Y; Kravchuk Z; Salminen T; Chumanevich AA; Dubnovitsky AP; Kankare J; Pentikäinen O; Lehtonen J; Arosio P; Martsev S; Johnson MS
Article: FEBS LETTERS. 2002;518(1-3):177-182
Partially structured state of the functional VH domain of the mouse anti-ferritin antibody F11
Martsev SP; Dubnovitsky AP; Stremovsky OA; Chumanevich AA; Tsybovsky YI; Kravchuk ZI; Deyev SM
Article: BIOCHEMISTRY. 2002;41(10):3389-3395
Amyloid fibril formation of the mouse V_L domain at acidic pH
Martsev SP; Dubnovitsky AP; Vlasov AP; Hoshino M; Hasegawa K; Naiki H; Goto Y
Article: BIOCHEMISTRY-MOSCOW. 2000;65(9):1011-1018
Expression, refolding, and ferritin-binding activity of the isolated VL-domain of monoclonal antibody F11
Dubnovitsky AP; Kravchuk ZI; Chumanevich AA; Cozzi A; Arosio P; Martsev SP
Article: BIOCHEMISTRY. 2000;39(27):8047-8057
Antiferritin single-chain Fv fragment is a functional protein with properties of a partially structured state:: Comparison with the completely folded V_L domain
Martsev SP; Chumanevich AA; Vlasov AP; Dubnovitsky AP; Tsybovsky YI; Deyev SM; Cozzi A; Arosio P; Kravchuk ZI
Article: FEBS LETTERS. 1998;441(3):458-462
Antiferritin single-chain antibody: a functional protein with incomplete folding?
Martsev SP; Kravchuk ZI; Chumanevich AA; Vlasov AP; Dubnovitsky AP; Bespalov IA; Arosio P; Deyev SM
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Conference publication: CLINICAL AND EXPERIMENTAL RHEUMATOLOGY. 2023;41(2):442-443
IDENTIFICATION OF JO-1 SPECIFIC AUTOREACTIVE T CELLS IN IDIOPATHIC INFLAMMATORY MYOPATHIES
Horuluoglu B; Galindo-Feria AS; Kozhukh G; Dubnovitsky A; Chemin K; Malmstrom V; Lundberg IE
Conference publication: ARTHRITIS & RHEUMATOLOGY. 2022;74:21-22
Differential Antigen Binding of Closely Related Monoclonal ACPA
Gronwall C; Dubnovitsky A; Titcombe P; Mueller D; Malmstrom V
Conference publication: ARTHRITIS & RHEUMATOLOGY. 2022;74:3446
Shared Epitope Allomorphs Directly Influence Antigen-specific T-cell Responses in RA
Kumar R; Dubnovitsky A; Gerstner C; Yoosuf N; Turcinov S; Boddul S; Wermeling F; Klareskog L; Padyukov L; Malmstrom V
Preprint: RESEARCH SQUARE. 2021
Biased TCR gene usage in citrullinated Tenascin C specific T-cells in rheumatoid arthritis
Sharma R; Boddul S; Yoosuf N; Turcinov S; Dubnovitsky A; Kozhukh G; Wermeling F; Kwok W; Klareskog L; Malmström V
Conference publication: ANNALS OF THE RHEUMATIC DISEASES. 2021;80:206
IDENTIFICATION AND CHARACTERIZATION OF HISRS+CD4+T CELLS PATIENTS WITH IDIOPATHIC INFLAMMATORY MYOPATHIES
Horuluoglu B; Galindo-Feria AS; Chemin K; Kozhukh G; Dubnovitsky A; Malmstrom V; Lundberg IE
Preprint: MEDRXIV. 2021
Expression levels of HLA-DRB and HLA-DQ are associated with MHC Class II haplotypes in healthy individuals and rheumatoid arthritis patients
Houtman M; Dzebisashvili A; Hesselberg E; Dubnovitsky A; Kozhukh G; Rönnblom L; Klareskog L; Malmström V; Padyukov L
Conference publication: EUROPEAN JOURNAL OF IMMUNOLOGY. 2021;51:141
Identification and characterization of antigen specific CD4+T-cells in patients with Jo1+myositis
Horuluoglu B; Feria ASG; Chemin K; Kozukh G; Dubnovitsky A; Malmstrom V; Lundberg IE
Conference publication: ARTHRITIS & RHEUMATOLOGY. 2021;73:3164-3165
Investigation of Antigen Specific CD4⁺ T Cells in Patients with Idiopathic Inflammatory Myopathies
Horuluoglu B; Galindo-Feria AS; Chemin K; Kozhukh G; Dubnovitsky A; Malmstrom V; Lundberg IE
Preprint: RESEARCH SQUARE. 2020
Multi-HLA class II tetramer analyses of citrulline-reactive T cells and early treatment response in rheumatoid arthritis
Gerstner C; Turcinov S; Hensvold AH; Chemin K; Uchtenhagen H; Ramwadhdoebe TH; Dubnovitsky A; Kozhukh G; Rönnblom L; Kwok WW; Achour A; Catrina AI; Baarsen LGMV; Malmström V
Preprint: RESEARCH SQUARE. 2020
Multi-HLA class II tetramer analyses of citrulline-reactive T cells and early treatment response in rheumatoid arthritis
Gerstner C; Turcinov S; Hensvold AH; Chemin K; Uchtenhagen H; Ramwadhdoebe TH; Dubnovitsky A; Kozhukh G; Rönnblom L; Kwok WW; Achour A; Catrina AI; Baarsen LGMV; Malmström V
Corrigendum: FRONTIERS IN IMMUNOLOGY. 2017;8:1236
Functional and Structural Characterization of a Novel HLA-DRB1*04:01-Restricted α-Enolase T Cell Epitope in Rheumatoid Arthritis (vol 7, 494, 2016)
Gerstner C; Dubnovitsky A; Sandin C; Kozhukh G; Uchtenhagen H; James EA; Ronnelid J; Ytterberg AJ; Pieper J; Reed E; Tandre K; Rieck M; Zubarev RA; Ronnblom L; Sandalova T; Buckner JH; Achour A; Malmstrom V

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