Vicent Pelechano Group - Selected publications

A list of selected publications by the Vicent Pelechano group.

High-throughput 5′P sequencing enables the study of degradation-associated ribosome stalls
Zhang Y, Pelechano V
Cell Reports Methods, Volume 1, Issue 1, 24 May 2021, 100001

Improved computational analysis of ribosome dynamics from 5'P degradome data using fivepseq.
Nersisyan L, Ropat M, Pelechano V
NAR Genom Bioinform 2020 Dec;2(4):lqaa099

Direct detection of SARS-CoV-2 using non-commercial RT-LAMP reagents on heat-inactivated samples.
Alekseenko A, Barrett D, Pareja-Sanchez Y, Howard RJ, Strandback E, Ampah-Korsah H, Rovšnik U, Zuniga-Veliz S, Klenov A, Malloo J, Ye S, Liu X, Reinius B, Elsässer SJ, Nyman T, Sandh G, Yin X, Pelechano V
Sci Rep 2021 01;11(1):1820

TIF-Seq2 disentangles overlapping isoforms in complex human transcriptomes.
Wang J, Li B, Marques S, Steinmetz LM, Wei W, Pelechano V
Nucleic Acids Res 2020 10;48(18):e104

Rapid Detection of COVID-19 Coronavirus Using a Reverse Transcriptional Loop-Mediated Isothermal Amplification (RT-LAMP) Diagnostic Platform.
Yu L, Wu S, Hao X, Dong X, Mao L, Pelechano V, Chen WH, Yin X
Clin Chem 2020 07;66(7):975-977

Chromatin-sensitive cryptic promoters putatively drive expression of alternative protein isoforms in yeast.
Wei W, Hennig BP, Wang J, Zhang Y, Piazza I, Pareja Sanchez Y, Chabbert CD, Adjalley SH, Steinmetz LM, Pelechano V
Genome Res 2019 12;29(12):1974-1984

eIF5A facilitates translation termination globally and promotes the elongation of many non polyproline-specific tripeptide sequences.
Pelechano V, Alepuz P
Nucleic Acids Res 2017 Jul;45(12):7326-7338

Widespread Co-translational RNA Decay Reveals Ribosome Dynamics.
Pelechano V, Wei W, Steinmetz LM
Cell 2015 Jun;161(6):1400-12

A high-throughput ChIP-Seq for large-scale chromatin studies.
Chabbert CD, Adjalley SH, Klaus B, Fritsch ES, Gupta I, Pelechano V, Steinmetz LM
Mol Syst Biol 2015 Jan;11(1):777

Alternative polyadenylation diversifies post-transcriptional regulation by selective RNA-protein interactions.
Gupta I, Clauder-Münster S, Klaus B, Järvelin AI, Aiyar RS, Benes V, Wilkening S, Huber W, Pelechano V, Steinmetz LM
Mol Syst Biol 2014 ;10():719

Extensive transcriptional heterogeneity revealed by isoform profiling.
Pelechano V, Wei W, Steinmetz LM
Nature 2013 May;497(7447):127-31

Content reviewer:
Sara Lidman