Publications from Åsa Sjöling Group

Analysis of Growth Phases of Enterotoxigenic Escherichia coli Reveals a Distinct Transition Phase before Entry into Early Stationary Phase with Shifts in Tryptophan, Fucose, and Putrescine Metabolism and Degradation of Neurotransmitter Precursors.
Joffré E, Xiao X, Correia MSP, Nookaew I, Sasse S, Globisch D, Zhu B, Sjöling Å.
Microbiol Spectr. 2022 

Comparative Genomics of Cyclic di-GMP Metabolism and Chemosensory Pathways in Shewanella algae Strains: Novel Bacterial Sensory Domains and Functional Insights into Lifestyle Regulation.
Martín-Rodríguez AJ, Higdon SM, Thorell K, Tellgren-Roth C, Sjöling Å, Galperin MY, Krell T, Römling U.
mSystems. 2022 

Long-read-sequenced reference genomes of the seven major lineages of enterotoxigenic Escherichia coli (ETEC) circulating in modern time.
von Mentzer A, Blackwell GA, Pickard D, Boinett CJ, Joffré E, Page AJ, Svennerholm AM, Dougan G, Sjöling Å.
Sci Rep. 2021 

Repeated Isolation of Extended-Spectrum-β-Lactamase-Positive Escherichia coli Sequence Types 648 and 131 from Community Wastewater Indicates that Sewage Systems Are Important Sources of Emerging Clones of Antibiotic-Resistant Bacteria.
Paulshus E, Thorell K, Guzman-Otazo J, Joffre E, Colque P, Kühn I, Möllby R, Sørum H, Sjöling Å.
Antimicrob Agents Chemother. 2019 Aug 23;63(9):e00823-19. doi: 10.1128/AAC.00823-19. Print 2019 Sep.

The bile salt glycocholate induces global changes in gene and protein expression and activates virulence in enterotoxigenic Escherichia coli.
Joffre E, Nicklasson M, Álvarez-Carretero S, Xiao X, Sun L, Nookaew I, et al
Sci Rep 2019 Jan;9(1):108

In Situ Analyses Directly in Diarrheal Stool Reveal Large Variations in Bacterial Load and Active Toxin Expression of Enterotoxigenic Escherichiacoli and Vibrio cholerae.
Begum Y, Rydberg H, Thorell K, Kwak Y, Sun L, Joffré E, et al
mSphere ;3(1):

In Vivo Analysis of the Viable Microbiota and Helicobacter pylori Transcriptome in Gastric Infection and Early Stages of Carcinogenesis.
Thorell K, Bengtsson-Palme J, Liu O, Palacios Gonzales R, Nookaew I, Rabeneck L, et al
Infect. Immun. 2017 10;85(10):

Identification of a Latin American-specific BabA adhesin variant through whole genome sequencing of Helicobacter pylori patient isolates from Nicaragua.
Thorell K, Hosseini S, Palacios Gonzáles R, Chaotham C, Graham D, Paszat L, et al
BMC Evol. Biol. 2016 Feb;16():53

The LT1 and LT2 variants of the enterotoxigenic Escherichia coli (ETEC) heat-labile toxin (LT) are associated with major ETEC lineages.
Joffré E, Sjöling
Gut Microbes 2016 ;7(1):75-81

The different ecological niches of enterotoxigenic Escherichia coli.
Gonzales-Siles L, Sjöling 
Environ. Microbiol. 2016 Mar;18(3):741-51

Allele variants of enterotoxigenic Escherichia coli heat-labile toxin are globally transmitted and associated with colonization factors.
Joffré E, von Mentzer A, Abd El Ghany M, Oezguen N, Savidge T, Dougan G, et al
J. Bacteriol. 2015 Jan;197(2):392-403

Identification of enterotoxigenic Escherichia coli (ETEC) clades with long-term global distribution.
von Mentzer A, Connor T, Wieler L, Semmler T, Iguchi A, Thomson N, et al
Nat. Genet. 2014 Dec;46(12):1321-6