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Comprehensive mapping of the effects of azacitidine on DNA methylation, repressive/permissive histone marks and gene expression in primary cells from patients with MDS and MDS-related disease
Tobiasson M, Abdulkadir H, Lennartsson A, Katayama S, Marabita F, De Paepe A, et al
Oncotarget 2017;8(17):28812-28825

DHA-rich n-3 fatty acid supplementation decreases DNA methylation in blood leukocytes: the OmegAD study
Karimi M, Vedin I, Freund Levi Y, Basun H, Faxén Irving G, Eriksdotter M, et al
The American journal of clinical nutrition 2017;106(4):1157-1165

Effect of Maternal Stress Prior to Conception on Hippocampal BDNF Signaling in Rat Offspring
Niknazar S, Nahavandi A, Peyvandi Aa, Peyvandi H, Zare Mehrjerdi F, Karimi M
Molecular neurobiology 2017;54(8):6436-6445

Evaluating Variant Calling Tools for Non-Matched Next-Generation Sequencing Data
Sandmann S, De Graaf Ao, Karimi M, Van Der Reijden Ba, Hellström-lindberg E, Jansen Jh, et al
Scientific reports 2017;7():43169-

-initiating mutations in MDS-RSs target lymphomyeloid hematopoietic stem cells
Mortera-blanco T, Dimitriou M, Woll Ps, Karimi M, Elvarsdottir E, Conte S, et al
Blood 2017;130(7):881-890

Integrative Genomics Identifies the Molecular Basis of Resistance to Azacitidine Therapy in Myelodysplastic Syndromes
Unnikrishnan A, Papaemmanuil E, Beck D, Deshpande Np, Verma A, Kumari A, et al
Cell reports 2017;20(3):572-585

Progression in patients with low- and intermediate-1-risk del(5q) myelodysplastic syndromes is predicted by a limited subset of mutations
Scharenberg C, Giai V, Pellagatti A, Saft L, Dimitriou M, Jansson M, et al
Haematologica 2017;102(3):498-508

Comparison of the Adulthood Chronic Stress Effect on Hippocampal BDNF Signaling in Male and Female Rats
Niknazar S, Nahavandi A, Peyvandi Aa, Peyvandi H, Akhtari As, Karimi M
Molecular neurobiology 2016;53(6):4026-4033

Mutation in ADORA1 identified as likely cause of early-onset parkinsonism and cognitive dysfunction
Jaberi E, Rohani M, Shahidi Ga, Nafissi S, Arefian E, Soleimani M, et al
Movement disorders : official journal of the Movement Disorder Society 2016;31(7):1004-11

Mutations in histone modulators are associated with prolonged survival during azacitidine therapy
Tobiasson M, Mclornan Dp, Karimi M, Dimitriou M, Jansson M, Ben Azenkoud A, et al
ONCOTARGET 2016;7(16):22103-15

Perturbed hematopoietic stem and progenitor cell hierarchy in myelodysplastic syndromes patients with monosomy 7 as the sole cytogenetic abnormality
Dimitriou M, Woll Ps, Mortera-blanco T, Karimi M, Wedge Dc, Doolittle H, et al
ONCOTARGET 2016;7(45):72685-72698

Aberrant splicing of genes involved in haemoglobin synthesis and impaired terminal erythroid maturation in SF3B1 mutated refractory anaemia with ring sideroblasts
Conte S, Katayama S, Vesterlund L, Karimi M, Dimitriou M, Jansson M, et al
British journal of haematology 2015;171(4):478-90

Global changes in DNA methylation in Alzheimer's disease peripheral blood mononuclear cells
Di Francesco A, Arosio B, Falconi A, Micioni Di Bonaventura Mv, Karimi M, Mari D, et al
Brain, behavior, and immunity 2015;45():139-44

High-throughput mutational screening adds clinically important information in myelodysplastic syndromes and secondary or therapy-related acute myeloid leukemia
Karimi M, Nilsson C, Dimitriou M, Jansson M, Matsson H, Unneberg P, et al
Haematologica 2015;100(6):e223-5

SF3B1 mutation identifies a distinct subset of myelodysplastic syndrome with ring sideroblasts
Malcovati L, Karimi M, Papaemmanuil E, Ambaglio I, Jädersten M, Jansson M, et al
Blood 2015;126(2):233-41

Analysis of the DNA methylome and transcriptome in granulopoiesis reveals timed changes and dynamic enhancer methylation
Rönnerblad M, Andersson R, Olofsson T, Douagi I, Karimi M, Lehmann S, et al
Blood 2014;123(17):e79-89

Azacitidine induces profound genome-wide hypomethylation in primary myelodysplastic bone marrow cultures but may also reduce histone acetylation
Grövdal M, Karimi M, Tobiasson M, Reinius L, Jansson M, Ekwall K, et al
Leukemia 2014;28(2):411-3

Differential methylation in CN-AML preferentially targets non-CGI regions and is dictated by DNMT3A mutational status and associated with predominant hypomethylation of HOX genes
Qu Y, Lennartsson A, Gaidzik Vi, Deneberg S, Karimi M, Bengtzén S, et al
Epigenetics 2014;9(8):1108-19

Limited clinical efficacy of azacitidine in transfusion-dependent, growth factor-resistant, low- and Int-1-risk MDS: Results from the nordic NMDSG08A phase II trial
Tobiasson M, Dybedahl I, Holm Ms, Karimi M, Brandefors L, Garelius H, et al
Blood cancer journal 2014;4():e189-

microRNA-34b/c on chromosome 11q23 is aberrantly methylated in chronic lymphocytic leukemia
Deneberg S, Kanduri M, Ali D, Bengtzen S, Karimi M, Qu Y, et al
EPIGENETICS 2014;9(6):910-7

Myelodysplastic syndromes are propagated by rare and distinct human cancer stem cells in vivo
Woll Ps, Kjällquist U, Chowdhury O, Doolittle H, Wedge Dc, Thongjuea S, et al
Cancer cell 2014;25(6):794-808

p53 protein expression independently predicts outcome in patients with lower-risk myelodysplastic syndromes with del(5q)
Saft L, Karimi M, Ghaderi M, Matolcsy A, Mufti Gj, Kulasekararaj A, et al
Haematologica 2014;99(6):1041-9

Dietary Alleviation of Maternal Obesity and Diabetes: Increased Resistance to Diet-Induced Obesity Transcriptional and Epigenetic Signatures
Attig L, Vige A, Gabory A, Karimi M, Beauger A, Gross Ms, et al
PLOS ONE 2013;8(6):e66816-

Parents' adulthood stress induces behavioral and hormonal alterations in male rat offspring
Niknazar S, Nahavandi A, Najafi R, Danialy S, Mehrjerdi Fz, Karimi M
BEHAVIOURAL BRAIN RESEARCH 2013;:136-43

SOXC transcription factors in mantle cell lymphoma: the role of promoter methylation in SOX11 expression
Wasik Am, Lord M, Wang X, Zong F, Andersson P, Kimby E, et al
Scientific reports 2013;3():1400-

The transporter ABCB7 is a mediator of the phenotype of acquired refractory anemia with ring sideroblasts
Nikpour M, Scharenberg C, Liu A, Conte S, Karimi M, Mortera-blanco T, et al
Leukemia 2013;27(4):889-896

Human cytomegalovirus infection is sensitive to the host cell DNA methylation state and alters global DNA methylation capacity
Esteki-zadeh A, Karimi M, Strååt K, Ammerpohl O, Zeitelhofer M, Jagodic M, et al
Epigenetics 2012;7(6):585-93

Epigenetic mechanisms as targets and companions of viral assaults
Ernberg I, Karimi M, Ekström Tj
Annals of the New York Academy of Sciences 2011;1230():E29-36

Epigenetic Regulation of Glucose Transporter 4 by Estrogen Receptor beta
Ruegg J, Cai W, Karimi M, Kiss Nb, Swedenborg E, Larsson C, et al
MOLECULAR ENDOCRINOLOGY 2011;25(12):2017-28

Genomic DNA Hypomethylation by Histone Deacetylase Inhibition Implicates DNMT1 Nuclear Dynamics
Arzenani Mk, Zade Ae, Ming Y, Vijverberg Sjh, Zhang Z, Khan Z, et al
MOLECULAR AND CELLULAR BIOLOGY 2011;31(19):4119-28

Global DNA methylation analysis using the Luminometric Methylation Assay
Karimi M, Luttropp K, Ekström Tj
Methods in molecular biology (Clifton, N.J.) 2011;791():135-44

Hypothalamic mitochondrial dysfunction associated with anorexia in the anx/anx mouse
Lindfors C, Nilsson Iak, Garcia-roves Pm, Zuberi Ar, Karimi M, Donahue Lr, et al
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 2011;108(44):18108-13

Molecular Characterization of Acquired Tolerance of Tumor Cells to Picropodophyllin (PPP)
Hashemi J, Worrall C, Vasilcanu D, Fryknas M, Sulaiman L, Karimi M, et al
PLOS ONE 2011;6(3):e14757-

Prognostic DNA methylation patterns in cytogenetically normal acute myeloid leukemia are predefined by stem cell chromatin marks
Deneberg S, Guardiola P, Lennartsson A, Qu Y, Gaidzik V, Blanchet O, et al
BLOOD 2011;118(20):5573-82

Gene expression profiling of erythroblasts from refractory anaemia with ring sideroblasts (RARS) and effects of G-CSF
Nikpour M, Pellagatti A, Liu Aq, Karimi M, Malcovati L, Gogvadze V, et al
BRITISH JOURNAL OF HAEMATOLOGY 2010;149(6):844-54

Gene-specific and global methylation patterns predict outcome in patients with acute myeloid leukemia
Deneberg S, Grovdal M, Karimi M, Jansson M, Nahi H, Corbacioglu A, et al
LEUKEMIA 2010;24(5):932-41

Maintenance treatment with azacytidine for patients with high-risk myelodysplastic syndromes (MDS) or acute myeloid leukaemia following MDS in complete remission after induction chemotherapy
Grovdal M, Karimi M, Khan R, Aggerholm A, Antunovic P, Astermark J, et al
BRITISH JOURNAL OF HAEMATOLOGY 2010;150(3):293-302

MOLECULAR PATHOGENESIS OF REFRACTORY ANEMIA WITH RINGED SIDEROBLASTS
Liu A, Nikpour M, Hogstrand K, Forsblom A, Jansson M, Karimi M, et al
HAEMATOLOGICA-THE HEMATOLOGY JOURNAL 2010;:125-126

Sex- and Diet-Specific Changes of Imprinted Gene Expression and DNA Methylation in Mouse Placenta under a High-Fat Diet
Gallou-kabani C, Gabory A, Tost J, Karimi M, Mayeur S, Lesage J, et al
PLOS ONE 2010;5(12):e14398-

Gene expression profiling of day 7 erythroblasts from refractory anemia with ringed sideroblasts (RARS) and microarray-based identification of erythroid granulocyte-CSF (G-CSF) targets
Nikpour M, Pellagatti A, Liu A, Karimi M, Malcovati L, Forsblom Am, et al
LEUKEMIA RESEARCH 2009;:S55-S55

NEW INSIGHTS INTO THE BIOLOGY OF REFRACTORY ANEMIA WITH RING SIDEROBLASTS (RARS) AND IDENTIFICATION OF ERYTHROID G-CSF TARGETS BY GENE EXPRESSION PROFILING
Nikpour M, Pellagatti A, Liu A, Karimi M, Malcovati L, Forsblom A, et al
HAEMATOLOGICA-THE HEMATOLOGY JOURNAL 2009;:99-99

Traumatic brain injury induces relocalization of DNA-methyltransferase 1
Lundberg J, Karimi M, Von Gertten C, Holmin S, Ekstrom Tj, Sandberg-nordqvist Ac
NEUROSCIENCE LETTERS 2009;457(1):8-11

Characterization of a novel obesity phenotype caused by interspecific hybridization
Singh U, Rizvi F, Yu Y, Shi W, Orth A, Karimi M, et al
Archives of physiology and biochemistry 2008;114(5):301-30

Characterization of a novel obesity phenotype caused by interspecific hybridization
Singh U, Rizvi F, Yu Y, Shi W, Orth A, Karimi M, et al
Archives of physiology and biochemistry 2008;114(5):301-30

Gene-specific promoter hypermethylation without global hypomethylation in follicular thyroid cancer
Lee Jj, Geli J, Larsson C, Wallin G, Karimi M, Zedenius J, et al
INTERNATIONAL JOURNAL OF ONCOLOGY 2008;33(4):861-9

Global and regional CpG methylation in pheochromocytomas and abdominal paragangliomas: Association to malignant behavior
Geli J, Kiss N, Karimi M, Lee Jj, Backdahl M, Ekstrom Tj, et al
CLINICAL CANCER RESEARCH 2008;14(9):2551-9

Histone deacetylase inhibitor Trichostatin A induces global and gene-specific DNA demethylation in human cancer cell lines
Ou Jn, Torrisani J, Unterberger A, Provencal N, Shikimi K, Karimi M, et al
BIOCHEMICAL PHARMACOLOGY 2007;73(9):1297-307

Hypomethylation and apoptosis in 5-azacytidine treated myeloid cells
Khan R, Schmidt-mende J, Karimi M, Forsblom Am, Gogvadze V, Hassan M, et al
LEUKEMIA RESEARCH 2007;:S62-S63

Impact of inflammation on epigenetic DNA methylation - a novel risk factor for cardiovascular disease?
Stenvinkel P, Karimi M, Johansson S, Axelsson J, Suliman M, Lindholm B, et al
JOURNAL OF INTERNAL MEDICINE 2007;261(5):488-99

In vitro replication of hepatitis D virus using a new construct containing a cDNA dimer of HDV genome
Behzadian F, Sabahi F, Sadeghizadeh M, Maghsoudi N, Chahooki Ff, Karimi M
INTERVIROLOGY 2007;50(6):387-93

Validation of endogenous controls for quantitative gene expression analysis: Application on brain cortices of human chronic alcoholics
Johansson S, Fuchs A, Okvist A, Karimi M, Harper C, Garrick T, et al
BRAIN RESEARCH 2007;1132(1):20-8

LUMA (LUminometric Methylation Assay) - A high throughput method to the analysis of genomic DNA methylation
Karimi M, Johansson S, Stach D, Corcoran M, Grander D, Schalling M, et al
EXPERIMENTAL CELL RESEARCH 2006;312(11):1989-95

Using LUMA A Luminometric-Based Assay for Global DNA-Methylation
Karimi M, Johansson S, Ekstrom Tj
EPIGENETICS 2006;1(1):45-8

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