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Publications

CodY Regulates Thiol Peroxidase Expression as Part of the Pneumococcal Defense Mechanism against HO Stress
Hajaj B, Yesilkaya H, Shafeeq S, Zhi X, Benisty R, Tchalah S, et al
Frontiers in cellular and infection microbiology 2017;7():210-

Impact of aspirin on the transcriptome of D39
Afzal M, Shafeeq S
Genomics data 2017;12():38-40

Modulation of Quorum Sensing in a Gram Positive Pathogen by Linear Imprinted Copolymers with anti-Infective Properties
Motib A, Guerreiro A, Al-bayati F, Piletska E, Manzoor I, Shafeeq S, et al
Angewandte Chemie (International ed. in English) 2017;():-

Niacin-mediated Gene Expression and Role of NiaR as a Transcriptional Repressor of , and in
Afzal M, Kuipers Op, Shafeeq S
Frontiers in cellular and infection microbiology 2017;7():70-

Pneumococcal galactose catabolism is controlled by multiple regulators acting on pyruvate formate lyase
Al-bayati Fay, Kahya Hfh, Damianou A, Shafeeq S, Kuipers Op, Andrew Pw, et al
SCIENTIFIC REPORTS 2017;:43587-

BcsZ inhibits biofilm phenotypes and promotes virulence by blocking cellulose production in Salmonella enterica serovar Typhimurium
Ahmad I, Rouf Sf, Sun L, Cimdins A, Shafeeq S, Le Guyon S, et al
Microbial cell factories 2016;15(1):177-

Cysteine-Mediated Gene Expression and Characterization of the CmbR Regulon in
Afzal M, Manzoor I, Kuipers Op, Shafeeq S
Frontiers in microbiology 2016;7():1929-

Cysteine-Mediated Gene Expression and Characterization of the CmbR Regulon in Streptococcus pneumoniae
Afzal M, Manzoor L, Kuipers Op, Shafeeq S
FRONTIERS IN MICROBIOLOGY 2016;:-

Methionine-mediated gene expression and characterization of the CmhR regulon in
Afzal M, Shafeeq S, Kuipers Op
Microbial genomics 2016;2(10):e000091-

N-acetylgalatosamine-Mediated Regulation ofthe aga Operon by AgaR in Streptococcus pneumoniae
Afzal M, Shafeeq S, Ahmed H, Kuipers Op
FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY 2016;:101-

N-acetylglucosamine-Mediated Expression of nagA and nagB in Streptococcus pneumoniae
Afzal M, Shafeeq S, Manzoor I, Henriques-normark B, Kuipers Op
FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY 2016;:158-

Ascorbic acid-dependent gene expression in Streptococcus pneumoniae and the activator function of the transcriptional regulator UlaR2
Afzal M, Shafeeq S, Kuipers Op
Frontiers in microbiology 2015;6():72-

Co(2+)-dependent gene expression in Streptococcus pneumoniae: opposite effect of Mn(2+) and Co(2+) on the expression of the virulence genes psaBCA, pcpA, and prtA
Manzoor I, Shafeeq S, Kloosterman Tg, Kuipers Op
Frontiers in microbiology 2015;6():748-

Fucose-Mediated Transcriptional Activation of the fcs Operon by FcsR in Streptococcus pneumoniae
Manzoor I, Shafeeq S, Afzal M, Kuipers Op
Journal of molecular microbiology and biotechnology 2015;25(2-3):120-8

GalR Acts as a Transcriptional Activator of galKT in the Presence of Galactose in Streptococcus pneumoniae
Afzal M, Shafeeq S, Manzoor I, Kuipers Op
Journal of molecular microbiology and biotechnology 2015;25(6):363-71

Maltose-Dependent Transcriptional Regulation of the mal Regulon by MalR in Streptococcus pneumoniae
Afzal M, Shafeeq S, Manzoor I, Kuipers Op
PloS one 2015;10(6):e0127579-

Ni2+-Dependent and PsaR-Mediated Regulation of the Virulence Genes pcpA, psaBCA, and prtA in Streptococcus pneumoniae
Manzoor I, Shafeeq S, Kuipers Op
PloS one 2015;10(11):e0142839-

Sialic acid-mediated gene expression in Streptococcus pneumoniae and role of NanR as a transcriptional activator of the nan gene cluster
Afzal M, Shafeeq S, Ahmed H, Kuipers Op
Applied and environmental microbiology 2015;81(9):3121-31

The Regulation of the AdcR Regulon in Streptococcus pneumoniae Depends Both on Zn(2+)- and Ni(2+)-Availability
Manzoor I, Shafeeq S, Afzal M, Kuipers Op
Frontiers in cellular and infection microbiology 2015;5():91-

Transcriptional profiling of UlaR-regulated genes in Streptococcus pneumoniae
Shafeeq S, Afzal M, Henriques-normark B, Kuipers Op
Genomics data 2015;4():57-9

Transcriptome analysis of Streptococcus pneumoniae D39 in the presence of cobalt
Manzoor I, Shafeeq S, Kuipers Op
Genomics data 2015;6():151-3

UlaR activates expression of the ula operon in Streptococcus pneumoniae in the presence of ascorbic acid
Afzal M, Shafeeq S, Henriques-normark B, Kuipers Op
Microbiology (Reading, England) 2015;161(Pt 1):41-9

Control of transcription elongation by GreA determines rate of gene expression in Streptococcus pneumoniae
Yuzenkova Y, Gamba P, Herber M, Attaiech L, Shafeeq S, Kuipers Op, et al
Nucleic acids research 2014;42(17):10987-99

LacR is a repressor of lacABCD and LacT is an activator of lacTFEG, constituting the lac gene cluster in Streptococcus pneumoniae
Afzal M, Shafeeq S, Kuipers Op
Applied and environmental microbiology 2014;80(17):5349-58

Respiratory syncytial virus increases the virulence of Streptococcus pneumoniae by binding to penicillin binding protein 1a. A new paradigm in respiratory infection
Smith Cm, Sandrini S, Datta S, Freestone P, Shafeeq S, Radhakrishnan P, et al
American journal of respiratory and critical care medicine 2014;190(2):196-207

Cellobiose-Mediated Gene Expression in Streptococcus pneumoniae: A Repressor Function of the Novel GntR-Type Regulator BguR
Shafeeq S, Kuipers Op, Kloosterman Tg
PLOS ONE 2013;8(2):e57586-

The role of zinc in the interplay between pathogenic streptococci and their hosts
Shafeeq S, Kuipers Op, Kloosterman Tg
Molecular microbiology 2013;88(6):1047-57

Characterization of the ROK-family transcriptional regulator RokA of Streptococcus pneumoniae D39
Shafeeq S, Kloosterman Tg, Rajendran V, Kuipers Op
MICROBIOLOGY-SGM 2012;:2917-26

CeIR-mediated activation of the cellobiose-utilization gene cluster in Streptococcus pneumoniae
Shafeeq S, Kloosterman Tg, Kuipers Op
MICROBIOLOGY-SGM 2011;:2854-61

The cop operon is required for copper homeostasis and contributes to virulence in Streptococcus pneumoniae
Shafeeq S, Yesilkaya H, Kloosterman Tg, Narayanan G, Wandel M, Andrew Pw, et al
MOLECULAR MICROBIOLOGY 2011;81(5):1255-70

Transcriptional response of Streptococcus pneumoniae to Zn2+ limitation and the repressor/activator function of AdcR
Shafeeq S, Kloosterman Tg, Kuipers Op
METALLOMICS 2011;3(6):609-18

Genetic variability of different wheat (Triticum aestivum L.) genotypes/cultivars under induced water stress
Shafeeq S, Mehboob-ur-rahman, Zafar Y
PAKISTAN JOURNAL OF BOTANY 2006;38(5):1671-1678

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